Contig 001705:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF029K12Sequence603001705 (2)ref|XP_004239214.1|5e-25PREDICTED: non-specific lipid transfer protein GPI-anchored 1 [Solanum lycopers719001705 (2)ref|XP_004239214.1|1e-24PREDICTED: non-specific lipid transfer protein GPI-anchored 1 [Solanum lycopers

Alignment

This contig is upended


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rJMFF029K12- AAATT
                      ____________________________________________________________
consensus AAATT
 
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rJMFF029K12- ACATAAAGATTACATTCCAGAGGTAAATATTTTAAAAATATAAGTATGGTGTTCTAAGCC
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consensus ACATAAAGATTACATTCCAGAGGTAAATATTTTAAAAATATAAGTATGGTGTTCTAAGCC
 
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rJMFF029K12- AGCATAGAAATTATATTTATCGTAACTACATACATTTAAAACAATTTCCAAAATGTGAAA
                      ____________________________________________________________
consensus AGCATAGAAATTATATTTATCGTAACTACATACATTTAAAACAATTTCCAAAATGTGAAA
 
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rJMFF029K12- TAGAAGATGGCTACCGCAACCGGTAAGTGTCCAGCAAGCTGCAGGGGATTATGCTTGAAG
                      ____________________________________________________________
consensus TAGAAGATGGCTACCGCAACCGGTAAGTGTCCAGCAAGCTGCAGGGGATTATGCTTGAAG
 
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rJMFF029K12- GCATTGGAGGGAGCAGGGCCTGCTCCGACGCCGGGAGTAGTGGAAGCAGAATTAGCAGAA
                      ____________________________________________________________
consensus GCATTGGAGGGAGCAGGGCCTGCTCCGACGCCGGGAGTAGTGGAAGCAGAATTAGCAGAA
 
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rJMFF029K12- GTGTTGGTGAAGAAAGCGATGTCGGGAGAGTTTGCCGGAAGTTTCAACAGCTCTGTTCAT
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consensus GTGTTGGTGAAGAAAGCGATGTCGGGAGAGTTTGCCGGAAGTTTCAACAGCTCTGTTCAT
 
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rJMFF029K12- TGTATATATCAATAATCAATCAATAGAATCACATGTGTGTGAGATCATGTCACTCGGACA
JMFF029K12+ TCGGACA
                      ____________________________________________________________
consensus TGTATATATCAATAATCAATCAATAGAATCACATGTGTGTGAGATCATGTCACTCGGACA
 
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rJMFF029K12- GGTAGTGACGTTGACGTCGTTGATCTTGCAAGCAGAAGGGAGCTGAAGCAATCGAGCTTC
JMFF029K12+ GGTAGTGACGTTGACGTCGTTGATCTTGCAAGCAGAAGGGAGCTGAAGCAATCGAGCTTC
                      ____________________________________________________________
consensus GGTAGTGACGTTGACGTCGTTGATCTTGCAAGCAGAAGGGAGCTGAAGCAATCGAGCTTC
 
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rJMFF029K12- CTGAATACCGGAGCTCTGTATCTGAGTGTTAGATCCATTGTGCACCTGCTCTATCATATA
JMFF029K12+ CTGAATACCGGAGCTCTGTATCTGAGTGTTAGATCCATTGTGCACCTGCTCTATCATATA
                      ____________________________________________________________
consensus CTGAATACCGGAGCTCTGTATCTGAGTGTTAGATCCATTGTGCACCTGCTCTATCATATA
 
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rJMFF029K12- GCAAAAGCAAAGCGGGCGTTCACTCGCCTCGATGCTCGACGCCGACTCGCAGCACTCCTT
JMFF029K12+ GCAAAAGCAAAGCGGGCGTTCACTCGCCTCGATGCTCGACGCCGACTCGCAGCACTCCTT
                      ____________________________________________________________
consensus GCAAAAGCAAAGCGGGCGTTCACTCGCCTCGATGCTCGACGCCGACTCGCAGCACTCCTT
 
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rJMFF029K12- CCCTGGCGTCGCCGCCTTCCCAGTAGCGAAGCTCAGGCACGCCACCACCTTCTGGATGTC
JMFF029K12+ CCCTGGCGTCGCCGCCTTCCCAGTAGCGAAGCTCAGGCACGCCACCACCTTCTGGATGTC
                      ____________________________________________________________
consensus CCCTGGCGTCGCCGCCTTCCCAGTAGCGAAGCTCAGGCACGCCACCACCTTCTGGATGTC
 
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rJMFF029K12- TTTCCCGCACCTGTCCTGCAAGTCCTCGGCTCCCTTTACCAAACCGCCGCTCACAATCAA
JMFF029K12+ TTTCCCGCACCTGTCCTGCAAGTCCTCGGCTCCCTTTACCAAACCGCCGCTCACAATCAA
                      ____________________________________________________________
consensus TTTCCCGCACCTGTCCTGCAAGTCCTCGGCTCCCTTTACCAAACCGCCGCTCACAATCAA
 
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rJMFF029K12- CATTACTAATAAACAGTAGTAGAAGATTGTTTGTAGCCTCATCGTCATTTTCTT
JMFF029K12+ CATTACTAATAAACAGTAGTAGAAGATTGTTTGTAGCCTCATCGTCATTTTCTTCAATTC
                      ____________________________________________________________
consensus CATTACTAATAAACAGTAGTAGAAGATTGTTTGTAGCCTCATCGTCATTTTCTTCAATTC