Contig 001702:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF029A16Sequence418001702 (3)ref|XP_010259029.1|47.0PREDICTED: uncharacterized protein LOC104598585 [Nelumbo nucifera]494001702 (3)ref|XP_009759089.1|69.3PREDICTED: uncharacterized protein LOC104211693 [Nicotiana sylvestris]
JMFN031G15Sequence558001702 (3)ref|XP_004245734.1|82.4PREDICTED: uncharacterized protein LOC101246270 [Solanum lycopersicum]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF029A16-                                             GAGGAGGTTTACATTTTCGGGGGTG
                      ____________________________________________________________
consensus                                                GAGGAGGTTTACATTTTCGGGGGTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF029A16-          AAGATGTTTAAGAAAATATCTCTGGGANAGATTTTTTCTTTTATTTTCTTTTTGGGCTCG
                      ____________________________________________________________
consensus             AAGATGTTTAAGAAAATATCTCTGGGANAGATTTTTTCTTTTATTTTCTTTTTGGGCTCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF029A16-          NTGCATTTGGTTTGGCTGGNAAAGTTTTGTACAAGAAAATCTTCCACTCNCATGAAGAAA
                      ____________________________________________________________
consensus             NTGCATTTGGTTTGGCTGGNAAAGTTTTGTACAAGAAAATCTTCCACTCNCATGAAGAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF029A16-          ATAAACAAGAGAAAACCGACCGGAGAGGCAGNAACTTCTTACTACCNAACNANTCCTANA
                      ____________________________________________________________
consensus             ATAAACAAGAGAAAACCGACCGGAGAGGCAGNAACTTCTTACTACCNAACNANTCCTANA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF029A16-          ATANTCCTACGAAATTATGAANACCGTCGNCGATCCACTTCACCATTTGATTCTGTGTCT
                      ____________________________________________________________
consensus             ATANTCCTACGAAATTATGAANACCGTCGNCGATCCACTTCACCATTTGATTCTGTGTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF029A16-          CCAGCTCCGCCGCCGGAAATTGCAGCCGNCACCACCGCCCGTGGCGGCNATTCTGGACTG
                      ____________________________________________________________
consensus             CCAGCTCCGCCGCCGGAAATTGCAGCCGNCACCACCGCCCGTGGCGGCNATTCTGGACTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF029A16-          CACATTCTCAAACTCGNATATCCGGCAAGGAATCTGNATCCCGNTGGGGTGATTGAACCC
                      ____________________________________________________________
consensus             CACATTCTCAAACTCGNATATCCGGCAAGGAATCTGNATCCCGNTGGGGTGATTGAACCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF029A16-          GTACACCGTCTCCGCCTCCCCAACANNTCCNCNAACAGCGGGTGGTTAAAGNAGATGACG
JMFN031G15+                                            AACAGCGGGTGGTTAAAGTAGATGACG
                      ____________________________________________________________
consensus             GTACACCGTCTCCGCCTCCCCAACANNTCCNCNAACAGCGGGTGGTTAAAGTAGATGACG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF029A16-          GGCACCACCNCTCTACGCGCCGCCGCCGCGCCGTCCTNCTTCTCCCCGA           
JMFN031G15+           GGCACCACCACTTTACGCGCCGCCGCCGCGCCGTCCTCCTTCTCCCCGACGTACACCGCC
                      ____________________________________________________________
consensus             GGCACCACCACTTTACGCGCCGCCGCCGCGCCGTCCTCCTTCTCCCCGACGTACACCGCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN031G15+           AGGTGCCCCTTCGGTACACCCACGCCTCTCTTCGCCTCCGCCGCTTCTTGCCCGATCCGA
                      ____________________________________________________________
consensus             AGGTGCCCCTTCGGTACACCCACGCCTCTCTTCGCCTCCGCCGCTTCTTGCCCGATCCGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN031G15+           ACATAACCCGGACACGCCGTTTCAACAAACCCCCCAAGCTCCGCCGCAGCTTAGAAAGCG
JMFF029A16+             ATAACCCGGACACGCCGTTTCTACAAACCCCCCAAGCTCCGCCGCAGCTTAGAAAGCG
                      ____________________________________________________________
consensus             ACATAACCCGGACACGCCGTTTCTACAAACCCCCCAAGCTCCGCCGCAGCTTAGAAAGCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN031G15+           CTCCTCCGTCTACGGCGGAGCTGCGCGGTTCCAGCAGCCGGTAGGAGCCCCCCGGCTTCG
JMFF029A16+           CTCCTCCGTCTACGGCGGAGCTGCGCGGTTCCAGCAGCCGGTAGGAGCCCCCCGGCTTCG
                      ____________________________________________________________
consensus             CTCCTCCGTCTACGGCGGAGCTGCGCGGTTCCAGCAGCCGGTAGGAGCCCCCCGGCTTCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN031G15+           CCCTCCGGTGAATGACCCACGTGAAAATCCCGACCAGCTTCCGCCCAATCCTGAAACCTC
JMFF029A16+           CCCTCCGGTGAATGACCCACGTGAAAATCCCGACCAGCTTCCGCCCAATCCTGAAACCTC
                      ____________________________________________________________
consensus             CCCTCCGGTGAATGACCCACGTGAAAATCCCGACCAGCTTCCGCCCAATCCTGAAACCTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN031G15+           TAGCTCTTCTCATATTAATTCACACAGATCAGAAGAAGTAGAAGAAGAAAGCTTTGACAA
JMFF029A16+           TAGCTCTTCTCATATTAATTCACACAGATCAGAAGAAGTAGAAGAAGAAAGCTTTGACAA
                      ____________________________________________________________
consensus             TAGCTCTTCTCATATTAATTCACACAGATCAGAAGAAGTAGAAGAAGAAAGCTTTGACAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN031G15+           CAATGGCGGACACTCTCGGATCTCTCAGTATTTATAACAACAATTGTATGAATGGTCTTA
JMFF029A16+           CAATGGCGGACACTCTCGGATCTCTCAGTATTTATAACAACAATTGTATGAATGGTCTTA
                      ____________________________________________________________
consensus             CAATGGCGGACACTCTCGGATCTCTCAGTATTTATAACAACAATTGTATGAATGGTCTTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN031G15+           TGTAGATTGTTGATGTCTGTTGGATTTTGCAAGGGAAAGATTCTTGGAATAGGAATGTGG
JMFF029A16+           TGTAGATTGTTGATGTCTGTTGGATTTTGCAAGGGAAAGATTCTTGGAATAGGAATGTGG
                      ____________________________________________________________
consensus             TGTAGATTGTTGATGTCTGTTGGATTTTGCAAGGGAAAGATTCTTGGAATAGGAATGTGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN031G15+           TGTGGTTGAAAGCTTTTAGAACTTAGAA                                
JMFF029A16+           TGTGGTTGAAAGCTTTTAGAACTTAGAAGAGTCCAAACATGGTGGAATTGAAGATGGAAT
                      ____________________________________________________________
consensus             TGTGGTTGAAAGCTTTTAGAACTTAGAAGAGTCCAAACATGGTGGAATTGAAGATGGAAT