clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF006M10 | Sequence | 568 | 001698 (4) | ref|XP_004251591.1| | 2e-23 | PREDICTED: palmitoyl-acyl carrier protein thioesterase, chloroplastic [Solanum | 822 | 002519 (2) | gb|ACQ57190.1| | 2e-62 | acyl acyl-carrier-protein thioesterase type B [Camellia oleifera] |
JMFF027K15 | Sequence | 571 | 001698 (4) | ref|XP_004251591.1| | 3e-24 | PREDICTED: palmitoyl-acyl carrier protein thioesterase, chloroplastic [Solanum | 717 | 001698 (4) | gb|EYU23034.1| | 1e-111 | hypothetical protein MIMGU_mgv1a007000mg [Erythranthe guttata] gb|EYU23035.1| hy |
JMFF030E23 | Sequence | 518 | 001698 (4) | ref|XP_006366870.1| | 5e-28 | PREDICTED: palmitoyl-acyl carrier protein thioesterase, chloroplastic-like [Sol | 701 | 002519 (2) | gb|ACQ57190.1| | 4e-63 | acyl acyl-carrier-protein thioesterase type B [Camellia oleifera] |
This contig is upended
. : . : . : . : . : . :
rJMFF027K15- TTCAGTGCAAGA
____________________________________________________________
consensus TTCAGTGCAAGA
. : . : . : . : . : . :
rJMFF027K15- GATATGTATGGTTCATTCGGTATTTGGGTATAGGCATAGAACTGCTAATATCTATAAAGG
____________________________________________________________
consensus GATATGTATGGTTCATTCGGTATTTGGGTATAGGCATAGAACTGCTAATATCTATAAAGG
. : . : . : . : . : . :
rJMFF027K15- ACAAAAAGATCTTCTGGATGCTTATACCTGGAAGCTCTCATTAAAGTGTCCCCAGTATAA
____________________________________________________________
consensus ACAAAAAGATCTTCTGGATGCTTATACCTGGAAGCTCTCATTAAAGTGTCCCCAGTATAA
. : . : . : . : . : . :
rJMFF027K15- AAATCACGGAGAAGCCAATCACGTCGCATACCATTCTTTCCTGATGCAGCTACCCACGTA
____________________________________________________________
consensus AAATCACGGAGAAGCCAATCACGTCGCATACCATTCTTTCCTGATGCAGCTACCCACGTA
. : . : . : . : . : . :
rJMFF027K15- TCTACTTCAACAAGATCACCCCAAGCAGGGTAACGATCCACAATAACCTGCATTTTACTG
____________________________________________________________
consensus TCTACTTCAACAAGATCACCCCAAGCAGGGTAACGATCCACAATAACCTGCATTTTACTG
. : . : . : . : . : . :
rJMFF027K15- ACTACCCAAATCAAATTTTTCTTGCACATTTCCTGAGTTGAGCCAAACCCGTCACCCATG
____________________________________________________________
consensus ACTACCCAAATCAAATTTTTCTTGCACATTTCCTGAGTTGAGCCAAACCCGTCACCCATG
. : . : . : . : . : . :
rJMFF027K15- ATTCCCACCGTCTTCACATGGTTCAGCGCAGTTTCCTGTAAATGATTCATCATTGTTTCT
____________________________________________________________
consensus ATTCCCACCGTCTTCACATGGTTCAGCGCAGTTTCCTGTAAATGATTCATCATTGTTTCT
. : . : . : . : . : . :
rJMFF027K15- ATTGATGCAGTTCTATCAGCTCCTATTTCATAAGACCTGATACTAAAATTTTGACGAAAA
____________________________________________________________
consensus ATTGATGCAGTTCTATCAGCTCCTATTTCATAAGACCTGATACTAAAATTTTGACGAAAA
. : . : . : . : . : . :
rJMFF027K15- ACAAAACTATCTTCAACAATTCTTCCCAAACCAAATGGATCAATGAGCATGTCAGGGCGC
____________________________________________________________
consensus ACAAAACTATCTTCAACAATTCTTCCCAAACCAAATGGATCAATGAGCATGTCAGGGCGC
. : . : . : . : . : . :
rJMFF027K15- TTCGGCTTCCAATCTAGCATCATCCACTGCTTCTCAGCGGCCAAGAAAATAGTTGTTATG
____________________________________________________________
consensus TTCGGCTTCCAATCTAGCATCATCCACTGCTTCTCAGCGGCCAAGAAAATAGTTGTTATG
. : . : . : . : . : . :
rJMFF027K15- GCTGCAAGAAGCATGCTCCAATCCGGCAGCTGATTGATAAATGTCTTTGAGGGATGTGAA
JMFF006M10+ TGATTGATAAATGTCTTTGAGGGATGTGAA
JMFF027K15+ TGATTGATAAATGTCTTTGAGGGATGTGAA
____________________________________________________________
consensus GCTGCAAGAAGCATGCTCCAATCCGGCAGCTGATTGATAAATGTCTTTGAGGGATGTGAA
. : . : . : . : . : . :
rJMFF027K15- GTGGTCACCTCATCATCAGTCTTGAAGCCATCCATCACAGTTGTCACAGTTCCATTTACC
JMFF006M10+ GTGGTCACCTCATCATCAGTCTTGAAGCCATCCATCACAGTTGTCACAGTTCCATTTACC
JMFF027K15+ GTGGTCACCTCATCATCAGTCTTGAAGCCATCCATCACAGTTGTCACAGTTCCATTTACC
____________________________________________________________
consensus GTGGTCACCTCATCATCAGTCTTGAAGCCATCCATCACAGTTGTCACAGTTCCATTTACC
. : . : . : . : . : . :
rJMFF027K15- TTTGGAGGCGCTTGTGCACTGGCCTTAACTTGCAAATTTCTAGCA
JMFF006M10+ TTTGGAGGCGCTTGTGCACTGGCCTTAACTTGCAAATTTCTAGCAGTGGAGGATTTCAAC
JMFF027K15+ TTTGGAGGCGCTTGTGCACTGGCCTTAACTTGCAAATTTCTAGCAGTGGAGGATTTCAAC
____________________________________________________________
consensus TTTGGAGGCGCTTGTGCACTGGCCTTAACTTGCAAATTTCTAGCAGTGGAGGATTTCAAC
. : . : . : . : . : . :
JMFF006M10+ TTAATGCCTTGTGCGTCTATGCTTGCAGGTGCACTTCCTCCAAACTTTGCAGATGTTTTG
JMFF027K15+ TTAATGCCTTGTGCGTCTATGCTTGCAGGTGCACTTCCTCCAAACTTTGCAGATGTTTTG
____________________________________________________________
consensus TTAATGCCTTGTGCGTCTATGCTTGCAGGTGCACTTCCTCCAAACTTTGCAGATGTTTTG
. : . : . : . : . : . :
JMFF006M10+ GCACCAGATTCAGGGGGCACATGATGACCAAGGAAAAAAGCAGCAGTGGCAACCATGATG
JMFF027K15+ GCACCAGATTCAGGGGGCACATGATGACCAAGGAAAAAAGCAGCAGTGGCAACCATGATG
____________________________________________________________
consensus GCACCAGATTCAGGGGGCACATGATGACCAAGGAAAAAAGCAGCAGTGGCAACCATGATG
. : . : . : . : . : . :
JMFF030E23+ CTTGAAGCATACGTGAGTGGAGTGAGTTAATATTGAGGA
JMFF006M10+ AAGTTATTATACCTCACTAGTCTTGAAGCATACGTGAGTGGAGTGAGTTAATATTGAGGA
JMFF027K15+ AAGTTATTATACCTCACTAGTCTTGAAGCATACGTGAGTGGAGTGAGTTAATATTGAGGA
____________________________________________________________
consensus AAGTTATTATACCTCACTAGTCTTGAAGCATACGTGAGTGGAGTGAGTTAATATTGAGGA
. : . : . : . : . : . :
JMFF030E23+ TGAATGCGTGGAAATGTACGAAAACAGAGAGTTCAATTCCTGATCAGCAACCCATATTTC
JMFF006M10+ TGAATGCGTGGAAATGTACGAAAACAGAGAGTTCAATTCCTGATCAGCAACCCATATTTC
JMFF027K15+ TGAATGAGTGGAAATGTACGAAAACAGAGAGTTCAATTCCTGATCAGCAACCCATATTTC
____________________________________________________________
consensus TGAATGCGTGGAAATGTACGAAAACAGAGAGTTCAATTCCTGATCAGCAACCCATATTTC
. : . : . : . : . : . :
JMFF030E23+ GAGAAGATTTCTTAGGGTTTGCAATCTTTTTTTCTTTTTTCTTCTTTATTATGAAATATG
JMFF006M10+ GAGAAGATTTCTTAGGGTTTGCAATCTTTTTTTCTTTTTTCTTCTTTATTATGAAATATG
JMFF027K15+ GAGAAGATTTCTTAGGGTTTGCAATCTTTTTTTCTTTTTTCTTCTTTATTATGAAATATG
____________________________________________________________
consensus GAGAAGATTTCTTAGGGTTTGCAATCTTTTTTTCTTTTTTCTTCTTTATTATGAAATATG
. : . : . : . : . : . :
JMFF030E23+ ATGATGATATTCTTGTATTCTTCGTTTTCTTAGACTTTTTGAAATAGCTGAGAAAAACTT
JMFF006M10+ ATGATGATATTCTTGTATTCTTCGTTTTCTTAGACTTTTTGAAATAGCTGAGAAAAACTT
JMFF027K15+ ATGATGATATTCTTGTATTCTTCGTTTTCTTAGACTTTTTGAAATAGCTGAGAAAAACTT
____________________________________________________________
consensus ATGATGATATTCTTGTATTCTTCGTTTTCTTAGACTTTTTGAAATAGCTGAGAAAAACTT
. : . : . : . : . : . :
JMFF030E23+ TGGCTCGGACTCTCGGAGAGAGAGAGAGAGAGAGAAGAAACAGCGGCTTTTTGAT
JMFF006M10+ TGGCTCGGACTCTCGGAGAGAGAGAGAGAGAGAGAAGAAACAGCGGCTTTTTGAT
JMFF027K15+ TGGCTCGGACTCTCGGAGAGAGAGAGAGAGAGAGAAGAAACAGCGGCTTTTTGATGATAG
____________________________________________________________
consensus TGGCTCGGACTCTCGGAGAGAGAGAGAGAGAGAGAAGAAACAGCGGCTTTTTGATGATAG