Contig 001671:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF022C24Sequence109001671 (3)
JMFF035H05Sequence523001671 (3)ref|XP_004245206.2|1e-28PREDICTED: ras guanine nucleotide exchange factor L isoform X2 [Solanum lycoper747001025 (3)ref|XP_009609924.1|4e-51PREDICTED: uncharacterized protein LOC104103704 isoform X1 [Nicotiana tomentosi
JMFF039F08Sequence484001671 (3)ref|XP_004245206.2|6e-20PREDICTED: ras guanine nucleotide exchange factor L isoform X2 [Solanum lycoper775001025 (3)ref|XP_009609924.1|6e-51PREDICTED: uncharacterized protein LOC104103704 isoform X1 [Nicotiana tomentosi

Alignment

This contig is upended


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JMFF035H05+            AATTGAGATTCAAGCCTAACGGTTGGCTTGGGAGTGGGAAATTGAGGTTCTCTTGGATA
JMFF039F08+                                                                   GATA
                      ____________________________________________________________
consensus              AATTGAGATTCAAGCCTAACGGTTGGCTTGGGAGTGGGAAATTGAGGTTCTCTTGGATA
 
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JMFF035H05+           AGTGATGGAGTAACAGATAAGTTCTGATAAGAATACTGATGCAGGGGATGAGAGGAGAAG
JMFF039F08+           AGTGATGGAGTAACAGATAAGTTCTGATAAGAATACTGATGCAGGGGATGAGAGGAGAAG
                      ____________________________________________________________
consensus             AGTGATGGAGTAACAGATAAGTTCTGATAAGAATACTGATGCAGGGGATGAGAGGAGAAG
 
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JMFF035H05+           GGTGAGTGGGAGTAGTTGTCCATGCAACTTGGAAAATCCTTGGCCGTGGCATTGGAATCA
JMFF039F08+           GGTGAGTGGGAGTAGTTGTCCATGCAACTTGGAAAATCCTTGGCCGTGGCATTGGAATCA
                      ____________________________________________________________
consensus             GGTGAGTGGGAGTAGTTGTCCATGCAACTTGGAAAATCCTTGGCCGTGGCATTGGAATCA
 
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JMFF035H05+           TTATTACTTGAATTCCCCCCAGAATTGAGCTTCGGTTCTTGTTCTAATGATGATTGTGGT
JMFF039F08+           TTATTACTTGAATTCCCCCCAGAATTGAGCTTCGGTTCTTGTTCTAATGATGATTGTGGT
                      ____________________________________________________________
consensus             TTATTACTTGAATTCCCCCCAGAATTGAGCTTCGGTTCTTGTTCTAATGATGATTGTGGT
 
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JMFF035H05+           GAGGGCTGCAATGGCTGATTCTCTGTTTGTGATTGCTGTTGTTGTTGCTGCTGCTGCTGT
JMFF039F08+           GAGGGCTGCAATGGCTGATTCTCTGTTTGTGATTGCTGTTGTTGTTGCTGCTGCTGCTGT
                      ____________________________________________________________
consensus             GAGGGCTGCAATGGCTGATTCTCTGTTTGTGATTGCTGTTGTTGTTGCTGCTGCTGCTGT
 
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JMFF035H05+           TGCTTCATAGCTGCTCTATGAAACTTCAGAGCAGTCACAATTTCTCGCCGAGCCTCAGCC
JMFF039F08+           TGCTTCATAGCTGCTCTATGAAACTTCAGAGCAGTCACAATTTCTCGCCGAGCCTCAGCC
                      ____________________________________________________________
consensus             TGCTTCATAGCTGCTCTATGAAACTTCAGAGCAGTCACAATTTCTCGCCGAGCCTCAGCC
 
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JMFF035H05+           ATGTTTAGAAGCCTCTCCTGATAAGGCCTGCTAGTATGAAGTCTTTTCCGGGCTTGTTTT
JMFF039F08+           ATGTTTAGAAGCCTCTCCTGATAAGGTCTGCTAGTATGAAGTCTTTTCCGGGCTTGTTTT
                      ____________________________________________________________
consensus             ATGTTTAGAAGCCTCTCCTGATAAGGTCTGCTAGTATGAAGTCTTTTCCGGGCTTGTTTT
 
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JMFF035H05+           TTACGTTGGGGTGGTTGGCATGGCGATGGCTGTGGCGATGGCTGCAACACTTGCGCCTGA
JMFF039F08+           TTACGTTGGGGTGGTTGGCATGGCGATGGCTGTGGCGATGGCTGCAACACTTGCGCCTGA
JMFF022C24+                      TGGTTGGCATGGCGATGGCTGTGGCGATGGCTGCAACACTTGCGCCTGA
                      ____________________________________________________________
consensus             TTACGTTGGGGTGGTTGGCATGGCGATGGCTGTGGCGATGGCTGCAACACTTGCGCCTGA
 
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JMFF035H05+           CTAGTAAAACCATCTCCAGCCAAATCACGGTCTGTAGAATTCGA                
JMFF039F08+           CTAGTAAAACCATCTCCAGCCAAATCACGGTCTGTAGAATTCGAGGGTTCTTTAGCTCTC
JMFF022C24+           CTAGTAAAACCATCTCCAGCCAAATCACGGTCTGTAGAATTCGAGGGTTCTTTAGCTCTC
                      ____________________________________________________________
consensus             CTAGTAAAACCATCTCCAGCCAAATCACGGTCTGTAGAATTCGAGGGTTCTTTAGCTCTC