Contig 001642:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007K18Sequence642001642 (5)ref|XP_006339589.1|3e-47PREDICTED: uncharacterized protein LOC102600197 isoform X1 [Solanum tuberosum]738001642 (5)ref|XP_006339589.1|4e-65PREDICTED: uncharacterized protein LOC102600197 isoform X1 [Solanum tuberosum]
JMFF017C09Sequence567001642 (5)ref|XP_006339589.1|8e-45PREDICTED: uncharacterized protein LOC102600197 isoform X1 [Solanum tuberosum]809001642 (5)ref|XP_006339589.1|2e-67PREDICTED: uncharacterized protein LOC102600197 isoform X1 [Solanum tuberosum]
JMSF049J12Sequence653001642 (5)ref|XP_006339589.1|2e-48PREDICTED: uncharacterized protein LOC102600197 isoform X1 [Solanum tuberosum]583012857 (14)ref|XP_010095157.1|1e-7760S ribosomal protein L32-1 [Morus notabilis] gb|EXB58323.1| 60S ribosomal prote

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF007K18- TGATTGTAGAGTAATATCA
rJMFF017C09- TATGATTGTAGAGTAATATCA
                      ____________________________________________________________
consensus TATGATTGTAGAGTAATATCA
 
. : . : . : . : . : . :
rJMFF007K18- AGGCAAGTATTTACAGGAGTTGTCTACTCATTAGAAGTAGAACATAAATTAGAGCCACTC
rJMFF017C09- AGGCAAGTATTTACAGGAGTTGTCTACTCATTAGAAGTAGAACATAAATTAGAGCCACTC
                      ____________________________________________________________
consensus AGGCAAGTATTTACAGGAGTTGTCTACTCATTAGAAGTAGAACATAAATTAGAGCCACTC
 
. : . : . : . : . : . :
rJMFF007K18- AAACAAACTTGCACATCACATTCACTTCCCTGCCTTGGCTGCTCTAGCCCTCCTGCCTTT
rJMFF017C09- AAACAAACTTGCACATCACATTCACTTCCCTGCCTTGGCTGCTCTAGCCCTCCTGCCTTT
                      ____________________________________________________________
consensus AAACAAACTTGCACATCACATTCACTTCCCTGCCTTGGCTGCTCTAGCCCTCCTGCCTTT
 
. : . : . : . : . : . :
rJMFF007K18- AATGTTGTGATGAAGTGCTGCTCCCTTTGAGGAAGGAACCCCTGCGGTCACCGCCAACAA
rJMFF017C09- AATGTTGTGATGAAGTGCTGCTCCCTTTGAGGAAGGAACCCCTGCGGTCACCGCCAACAA
                      ____________________________________________________________
consensus AATGTTGTGATGAAGTGCTGCTCCCTTTGAGGAAGGAACCCCTGCGGTCACCGCCAACAA
 
. : . : . : . : . : . :
rJMFF007K18- TAATGTCTTTAAGTCGCGACAAGGGACCAAGCATCCTGCCAATCCTCTCATCATGGAGCC
rJMFF017C09- TAATGTCTTTAAGTCGCGACAAGGGACCAAGCATCCTGCCAATCCTCTCATCATGGAGCC
                      ____________________________________________________________
consensus TAATGTCTTTAAGTCGCGACAAGGGACCAAGCATCCTGCCAATCCTCTCATCATGGAGCC
 
. : . : . : . : . : . :
rJMFF007K18- CATGCTGCCACTTCAGTTGCAAGATTTGCCACCTCTCGTGTTGCCACCGCTGACCAAGAA
rJMFF017C09- CATGCTGCCACTTCAGTTGCAAGATTTGCCACCTCTCGTGTTGCCACCGCTGACCAAGAA
                      ____________________________________________________________
consensus CATGCTGCCACTTCAGTTGCAAGATTTGCCACCTCTCGTGTTGCCACCGCTGACCAAGAA
 
. : . : . : . : . : . :
rJMFF007K18- TCACAAGTCCCATTACAGCAGCAGCAACAAAGATTGACCAAAATGTATTTGCCTCTTTAG
rJMFF017C09- TCACAAGTCCCATTACAGCAGCAGCAACAAAGATTGACCAAAATGTATTTGCCTCTTTAG
                      ____________________________________________________________
consensus TCACAAGTCCCATTACAGCAGCAGCAACAAAGATTGACCAAAATGTATTTGCCTCTTTAG
 
. : . : . : . : . : . :
rJMFF007K18- CATGTGCAACAAGAGAGGCAGCTTGCCTTTTCCACCAAGCTTGACAAGGAAGGTTATCAT
rJMFF017C09- CATGTGCAACAAGAGAGGCAGCTTGCCTTTTCCACCAAGCTTGACAAGGAAGGTTATCAT
                      ____________________________________________________________
consensus CATGTGCAACAAGAGAGGCAGCTTGCCTTTTCCACCAAGCTTGACAAGGAAGGTTATCAT
 
. : . : . : . : . : . :
rJMFF007K18- CACGCTTATTCTTATTTGAGACACCTGAATTTGATCCTTGCTCAAAAGGTTCTAATGGAC
rJMFF017C09- CACGCTTATTCTTATTTGAGACACCTGAATTTGATCCTTGCTCAAAAGGTTCTAATGGAC
JMFF007K18+ GCTCAAAAGGTTNTAATGGAC
JMSF049J12+ TGATCCTTGCTCAAAAGGTTCTAATGGAC
                      ____________________________________________________________
consensus CACGCTTATTCTTATTTGAGACACCTGAATTTGATCCTTGCTCAAAAGGTTCTAATGGAC
 
. : . : . : . : . : . :
rJMFF007K18- AATTACTTGCAATGTTTTCCTCAACAATGGTTGATCCAGCCATGTGTTCTTCACTATGCA
rJMFF017C09- AATTACTTGCAATGTTTTCCTCAACAATGGTTGATCCAGCCATGTGTTCTTCACTATGCA
JMFF007K18+ AATTACTTGCAATGTTTTCCTCAACAATGGTTGATCCAGCCATGTGTTCTTCACTATGCA
JMSF049J12+ AATTACTTGCAATGTTTTCCTCAACAATGGTTGATCCAGCCATGTGTTCTTCACTATGCA
                      ____________________________________________________________
consensus AATTACTTGCAATGTTTTCCTCAACAATGGTTGATCCAGCCATGTGTTCTTCACTATGCA
 
. : . : . : . : . : . :
rJMFF007K18- AGGAACTAGGCATTGCAGTGCTGTGTTTAATTGATTCTTTTGCTGCTGTATCTTCTTTGA
rJMFF017C09- AGGAACTAGGCATTGCAGTGCTGTGTTTAATTGATTCTTTTGCTGCTGTATCTTCTTTGA
JMFF007K18+ AGGAACTAGGCATTGCAGTGCTGTGTTTAATTGATTCTTTTGCTGCTGTATCTTCTTTGA
JMSF049J12+ AGGAACTAGGCATTGCAGTGCTGTGTTTAATTGATTCTTTTGCTGCTGTATCTTCTTTGA
JMFF017C09+ ATTCTTTTGCTGCTGTATCTTCTTTGA
                      ____________________________________________________________
consensus AGGAACTAGGCATTGCAGTGCTGTGTTTAATTGATTCTTTTGCTGCTGTATCTTCTTTGA
 
. : . : . : . : . : . :
rJMFF007K18- ACTCCGCATCACTAATGGGTAAGATGTTTCCATTTTCATCAAAGATCTGAATCCCANGAA
rJMFF017C09- ACTCCGCATCACTAATGGGTAAGATGTTTCCATTTTCATCAAAGATCTGAATCCCAGGAA
JMFF007K18+ ACTCCGCATCACTAATGGGTAAGATGTTTCCATTTTCATCAAAGATCTGAATCCCAGGAA
JMSF049J12+ ACTCCGCATCACTAATGGGTAAGATGTTTCCATTTTCATCAAAGATCTGAATCCCAGGAA
JMFF017C09+ ACTCCGCATCACTAATGGGTAAGATGTTTCCATTTTCATCAAAGATCTGAATCCCAGGAA
                      ____________________________________________________________
consensus ACTCCGCATCACTAATGGGTAAGATGTTTCCATTTTCATCAAAGATCTGAATCCCAGGAA
 
. : . : . : . : . : . :
rJMFF007K18- ATGCTGACGAGCCAAATCCTTTAACGTTCATATTCTCTTCAAACTTCATACCTG
rJMFF017C09- ATGCTGACGAGCCAAATCCTTTAACGTTCATATTCTCTTCAAACTTCATACCTGCTGTAC
JMFF007K18+ ATGCTGACGAGCCAAATCCTTTAACGTTCATATTCTCTTCAAACTTCATACCTGCTGTAC
JMSF049J12+ ATGCTGACGAGCCAAATCCTTTAACGTTCATATTCTCTTCAAACTTCATACCTGCTGTAC
JMFF017C09+ ATGCTGACGAGCCAAATCCTTTAACGTTCATATTCTCTTCAAACTTCATACCTGCTGTAC
                      ____________________________________________________________
consensus ATGCTGACGAGCCAAATCCTTTAACGTTCATATTCTCTTCAAACTTCATACCTGCTGTAC
 
. : . : . : . : . : . :
rJMFF017C09- GGTCTCCCTCAGTTACNAATTTCTCATTTTTAACAACCTGTTCAGTCTGGATCTGATTGN
JMFF007K18+ GGTCTCCCTCAGTTACAAATTTCTCATTTTTAACAACCTGTTCAGTCTGGATCTGATTGT
JMSF049J12+ GGTCTCCCTCAGTTACAAATTTCTCATTTTTAACAACCTGTTCAGTCTGGATCTGATTGT
JMFF017C09+ GGTCTCCCTCAGTTACAAATTTCTCATTTTTAACAACCTGTTCAGTCTGGATCTGATTGT
                      ____________________________________________________________
consensus GGTCTCCCTCAGTTACAAATTTCTCATTTTTAACAACCTGTTCAGTCTGGATCTGATTGT
 
. : . : . : . : . : . :
rJMFF017C09- TCTCTGGT
JMFF007K18+ TCTCTGGTTCCAATGGCAAATTTTCATGCTGACTTGGTGGAAAGACAAAGTGACCAGACA
JMSF049J12+ TCTCTGGTTCCAATGGCAAATTTTCATGCTGACTTGGTGGAAAGACAAAGTGACCAGACA
JMFF017C09+ TCTCTGGTTCCAATGGCAAATTTTCATGCTGACTTGGTGGAAAGACAAAGTGACCAGACA
                      ____________________________________________________________
consensus TCTCTGGTTCCAATGGCAAATTTTCATGCTGACTTGGTGGAAAGACAAAGTGACCAGACA
 
. : . : . : . : . : . :
JMFF007K18+ TAAACATGGCATCAGAAGTTTCAGCTTCATACT
JMSF049J12+ TAAACATGGCATCAGAAGTTTCAGCTTCATACTCTGCACTACTCTTATGCTCGTCATTCA
JMFF017C09+ TAAACATGGCATCAGAAGTTTCAGCTTCATACTCTGCACTACTCTTATGCTCGTCATTCA
                      ____________________________________________________________
consensus TAAACATGGCATCAGAAGTTTCAGCTTCATACTCTGCACTACTCTTATGCTCGTCATTCA
 
. : . : . : . : . : . :
JMSF049J12+ AATCAGCCTGTTTACCAGGAGCAGCAGCATATGCTGATGCTGTAAGGGATACAACCTCCC
JMFF017C09+ AATCAGCCTGTTTACCAGGAGCAGCAGCATATGCTGATGCTGTAAGGGATACAACCTCCC
                      ____________________________________________________________
consensus AATCAGCCTGTTTACCAGGAGCAGCAGCATATGCTGATGCTGTAAGGGATACAACCTCCC
 
. : . : . : . : . : . :
JMSF049J12+ ACTCATTTCCACGAGGAGCTGTCTCTTCGACCTCCTCATTACTTGCCATTGAGAGAAAAT
JMFF017C09+ ACTCATTTCCACGAGGAGCTGTCTCTTCGACCTCCTCATTACTTGCCATTGAGAGAAAAT
                      ____________________________________________________________
consensus ACTCATTTCCACGAGGAGCTGTCTCTTCGACCTCCTCATTACTTGCCATTGAGAGAAAAT
 
. : . : . : . : . : . :
JMSF049J12+ TTGAGTTTCACAGCCAGAAGAGAAAGCAGAGAGATCACGGCGATAACCAGAGCTCCGGTG
JMFF017C09+ TTGAGTTTCACAGCCAGAAGAGAAAGCAGAGAGATCACGGCGATAACCAGAGCTCCGGTG
                      ____________________________________________________________
consensus TTGAGTTTCACAGCCAGAAGAGAAAGCAGAGAGATCACGGCGATAACCAGAGCTCCGGTG
 
. : . : . : . : . : . :
JMSF049J12+ AGAACGATCGGAAAAAGAGAG
JMFF017C09+ AGAACGATCGGAAAAAGAGAGATACGAGGAGAGAGAGAGAGAGAATTTTATAATTGAGCC
                      ____________________________________________________________
consensus AGAACGATCGGAAAAAGAGAGATACGAGGAGAGAGAGAGAGAGAATTTTATAATTGAGCC