Contig 001639:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012I22Sequence588001639 (6)ref|XP_006471307.1|160PREDICTED: uncharacterized protein LOC102611747 [Citrus sinensis]801001173 (5)ref|XP_002532007.1|1e-22conserved hypothetical protein [Ricinus communis] gb|EEF30380.1| conserved hypot
JMFF016L12Sequence570001639 (6)ref|XP_006471307.1|156PREDICTED: uncharacterized protein LOC102611747 [Citrus sinensis]722001173 (5)ref|XP_002531759.1|2e-22conserved hypothetical protein [Ricinus communis] gb|EEF30615.1| conserved hypot
JMFF039N18Sequence582001639 (6)ref|XP_006471307.1|161PREDICTED: uncharacterized protein LOC102611747 [Citrus sinensis]721001173 (5)ref|XP_002531759.1|1e-22conserved hypothetical protein [Ricinus communis] gb|EEF30615.1| conserved hypot
JMFS088B08Sequence656001639 (6)ref|XP_006471307.1|174PREDICTED: uncharacterized protein LOC102611747 [Citrus sinensis]
JMSF033B15Sequence633001639 (6)ref|XP_006485550.1|142PREDICTED: uncharacterized protein LOC102627687 [Citrus sinensis]746001173 (5)ref|XP_006470496.1|125PREDICTED: uncharacterized protein LOC102617255 [Citrus sinensis]
JMSF048L18Sequence694001639 (6)ref|XP_006471307.1|178PREDICTED: uncharacterized protein LOC102611747 [Citrus sinensis]801001173 (5)ref|XP_006470496.1|128PREDICTED: uncharacterized protein LOC102617255 [Citrus sinensis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF033B15+ TGAGCCTCGA
                      ____________________________________________________________
consensus TGAGCCTCGA
 
. : . : . : . : . : . :
JMSF033B15+ GATGGTGTTGTTTTGCCGCCTTCTTTGAACAGAGTTATGAAAGAATGTCGAATTTACGTC
                      ____________________________________________________________
consensus GATGGTGTTGTTTTGCCGCCTTCTTTGAACAGAGTTATGAAAGAATGTCGAATTTACGTC
 
. : . : . : . : . : . :
JMSF033B15+ CCCTTCTCTCAACCAAAATTGCTTGGCTCTTTGACGCCAGTAATCGTTTTGGTGTTGTAG
                      ____________________________________________________________
consensus CCCTTCTCTCAACCAAAATTGCTTGGCTCTTTGACGCCAGTAATCGTTTTGGTGTTGTAG
 
. : . : . : . : . : . :
JMSF033B15+ AACCCTCAAGTACTCGTACTGGGCTTCCCTGAATAACATTAATCCCTTATGGTCCCTTTG
JMFS088B08+ GGTCCCTNTG
JMSF048L18+ TCAAGTACTCGTACTGGGCTTCCCTGAATAACATTAATCCCTTATGGTCCCTTTG
                      ____________________________________________________________
consensus AACCCTCAAGTACTCGTACTGGGCTTCCCTGAATAACATTAATCCCTTATGGTCCCTTTG
 
. : . : . : . : . : . :
JMSF033B15+ ATGATTTAGAGACGCCATCTTGTTTCTCCAATACGTTATGCGCCTATTGAAATTGGTAGC
JMFF039N18+ AATTGGTAGC
JMFS088B08+ ATGATTTAGAGACGCCATCTTGTTTCTCCAATACGTTATGCGCCTATTGAAATTGGTAGC
JMSF048L18+ ATGATTNAGAGACGCCATCTTGTTTCTCCAATACGTTATGCGCCTATTGAAATTGGTAGC
                      ____________________________________________________________
consensus ATGATTTAGAGACGCCATCTTGTTTCTCCAATACGTTATGCGCCTATTGAAATTGGTAGC
 
. : . : . : . : . : . :
JMSF033B15+ AAAGCCTTTGCTCCAATCCCATATAGCTTTGCCGAAGCTCCCAATTCGATCAATGAAGTC
JMFF039N18+ AAAGCCTTTGCTCCAATCCCATATAGCTTTGCCGAAGCTCCCAATTCGATCAATGAAGTC
JMFS088B08+ AAAGCCTTTGCTCCAATCCCATATAGCTTTGCCGAAGCTCCCAATTCGATCAATGAAGTC
JMSF048L18+ AAAGCCTTTGCTCCAATCCCATATAGCTTTGCCGAAGCTCCCAATTCGATCAATGAAGTC
JMFF012I22+ CCAATCCCATATAGCTTTGCCGAAGCTCCCAATTCGATCAATGAAGTC
JMFF016L12+ GCCGAAGCTCCCAATTCGATCAATGAAGTC
                      ____________________________________________________________
consensus AAAGCCTTTGCTCCAATCCCATATAGCTTTGCCGAAGCTCCCAATTCGATCAATGAAGTC
 
. : . : . : . : . : . :
JMSF033B15+ CTGCCCTTGGTATCTTGCCCAACTTTCCTCCATAACATCTCTACATATTGACTCCCTTAG
JMFF039N18+ CTGCCCTTGGTATCTTGCCCAACTTTCCTCCATAACATCTCTACATATTGACTCCCTTAG
JMFS088B08+ CTGCCCTTGGTATCTTGCCCAACTTTCCTCCATAACATCTCTACATATTGACTCCCTTAG
JMSF048L18+ CTGCCCTTGGTATCTTGCCCAACTTTCCTCCATAACATCTCTACATATTGACTCCCTTAG
JMFF012I22+ CTGCCCTTGGTATCTTGCCCAACTTTCCTCCATAACATCTCTACATATTGACTCCCTTAG
JMFF016L12+ CTGCCCTTGGTATCTTGCCCAACTTTCCTCCATAACATCTCTACATATTGACTCCCTTAG
                      ____________________________________________________________
consensus CTGCCCTTGGTATCTTGCCCAACTTTCCTCCATAACATCTCTACATATTGACTCCCTTAG
 
. : . : . : . : . : . :
JMSF033B15+ CCAGAGATTCTCAAATCGAAATCTCTTCTTCGCACAAAATTTCTCCTCCAGTAGTATCTG
JMFF039N18+ CCAGAGATTCTCAAATCGAAATCTCTTCTTCGCACAAAATTTCTCCTCCAGTAGTATCTG
JMFS088B08+ CCAGAGATTCTCAAATCGAAATCTCTTCTTCGCACAAAATTTCTCCTCCAGTAGTATCTG
JMSF048L18+ CCAGAGATTCTCAAATCGAAATCTCTTCTTCGCACAAAATTTCTCCTCCAGTAGTATCTG
JMFF012I22+ CCAGAGATTCTCAAATCGAAATCTCTTCTTCGCACAAAATTTCTCCTCCAGTAGTATCTG
JMFF016L12+ CCAGAGATTCTCAAATCGAAATCTCTTCTTCGCACAAAATTTCTCCTCCAGTAGTATCTG
                      ____________________________________________________________
consensus CCAGAGATTCTCAAATCGAAATCTCTTCTTCGCACAAAATTTCTCCTCCAGTAGTATCTG
 
. : . : . : . : . : . :
JMSF033B15+ AAGATGGATAGGGATGTGGTCGCTCTTCGGGACAGGAATAGATGACGCCAAAGCTTGGGA
JMFF039N18+ AAGATGGATAGGGATGTGGTCGCTCTTCGGGACAGGAATAGATGACGCCAAAGCTTGGGA
JMFS088B08+ AAGATGGATAGGGATGTGGTCGCTCTTCGGGACAGGAATAGATGACGCCAAAGCTTGGGA
JMSF048L18+ AAGATGGATAGGGATGTGGTCGCTCTTCGGGACAGGAATAGATGACGCCAAAGCTTGGGA
JMFF012I22+ AAGATGGATAGGGATGTGGTCGCTCTTCGGGACAGGAATAGATGACGCCAAAGCTTGGGA
JMFF016L12+ AAGATGGATAGGGATGTGGTCGCTCTTCGGGACAGGAATAGATGACGCCAAAGCTTGGGA
                      ____________________________________________________________
consensus AAGATGGATAGGGATGTGGTCGCTCTTCGGGACAGGAATAGATGACGCCAAAGCTTGGGA
 
. : . : . : . : . : . :
JMSF033B15+ GAATACTTCAGCCCAATGATCTGAAACCAACACCCTGTCTAGTTTTTCCTCAATCCAATT
JMFF039N18+ GAATACTTCAGCCCAATGATCTGAAACCAACACCCTGTCTAGTTTTTCCTCAATCCAATT
JMFS088B08+ GAATACTTCAGCCCAATGATCTGAAACCAACACCCTGTCTAGTTTTTCCTCAATCCAATT
JMSF048L18+ GAATACTTCAGCCCAATGATCTGAAACCAACACCCTGTCTAGTTTTTCCTCAATCCAATT
JMFF012I22+ GAATACTTCAGCCCAATGATCTGAAACCAACACCCTGTCTAGTTTTTCCTCAATCCAATT
JMFF016L12+ GAATACTTCAGCCCAATGATCTGAAACCAACACCCTGTCTAGTTTTTCCTCAATCCAATT
                      ____________________________________________________________
consensus GAATACTTCAGCCCAATGATCTGAAACCAACACCCTGTCTAGTTTTTCCTCAATCCAATT
 
. : . : . : . : . : . :
JMSF033B15+ TGGTGTGCCGCTTGACTTTTCCCAGGTGAATTGATATCCTTTGAAAGGAAAATCCCGCGA
JMFF039N18+ TGGTGTGCCGCTTGACTTTTCCCAGGTGAATTGATATCCTTTGAAAGGAAAATCCCGCGA
JMFS088B08+ TGGTGTGCCGCTTGACTTTTCCCAGGTGAATTGATATCCTTTGAAAGGAAAATCCCGCGA
JMSF048L18+ TGGTGTGCCGCTTGACTTTTCCCAGGTGAATTGATATCCTTTGAAAGGAAAATCCCGCGA
JMFF012I22+ TGGTGTGCCGCTTGACTTTTCCCAGGTGAATTGATATCCTTTGAAAGGAAAATCCCGCGA
JMFF016L12+ TGGTGTGCCGCTTGACTTTTCCCAGGTGAATTGATATCCTTTGAAAGGAAAATCCCGCGA
                      ____________________________________________________________
consensus TGGTGTGCCGCTTGACTTTTCCCAGGTGAATTGATATCCTTTGAAAGGAAAATCCCGCGA
 
. : . : . : . : . : . :
JMSF033B15+ TCCGCTTGTTTCAACAGCCTCC
JMFF039N18+ TCCGCTTGTTTCAACAGCCTCCTTGAAACCTTCAATCAGACGACTGGGTTGAGGGTTCCC
JMFS088B08+ TCCGCTTGTTTCAACAGCCTCCTTGAAACCTTCAATCAGACGACTGGGTTGAGGGTTCCC
JMSF048L18+ TCCGCTTGTTTCAACAGCCTCCTTGAAACCTTCAATCAGACGACTGGGTTGAGGGTTCCC
JMFF012I22+ TCCGCTTGTTTCAACAGCCTCCTTGAAACCTTCAATCAGACGACTGGGTTGAGGGTTCCC
JMFF016L12+ TCCGCTTGTTTCAACAGCCTCCTTGAAACCTTCAATCAGACGACTGGGTTGAGGGTTCCC
                      ____________________________________________________________
consensus TCCGCTTGTTTCAACAGCCTCCTTGAAACCTTCAATCAGACGACTGGGTTGAGGGTTCCC
 
. : . : . : . : . : . :
JMFF039N18+ TCCTCATTTCTCTTTCGGGCACAATATGTCGTTGAAGTCTCCCATTACCGCCCAAGGAAG
JMFS088B08+ TCCTCATTTCTCTTTCGGGCACAATATGTCGTTGAAGTCTCCCATTACCGCCCAAGGAAG
JMSF048L18+ TCCTCATTTCTCTTTCGGGCACAATATGTCGTTGAAGTCTCCCATTACCGCCCAAGGAAG
JMFF012I22+ TCCTCATTTCTCTTTCGGGCACAATATGTCGTTGAAGTCTCCCATTACCGCCCAAGGAAG
JMFF016L12+ TCCTCATTTCTCTTTCGGGCACAATATGTCGTTGAAGTCTCCCATTACCGCCCAAGGAAG
                      ____________________________________________________________
consensus TCCTCATTTCTCTTTCGGGCACAATATGTCGTTGAAGTCTCCCATTACCGCCCAAGGAAG
 
. : . : . : . : . : . :
JMFF039N18+ GTAATTGAGAGTCGACAGTCTCTTCAAGAGACTCCATGACTCAGAACGTCGATCTCTCTC
JMFS088B08+ GTAATTGAGAGTCGACAGTCTCTTCAAGAGACTCCATGACTCAGAACGTCGATCTCTCTC
JMSF048L18+ GTAATTGAGAGTCGACAGTCTCTTCAAGAGACTCCATGACTCAGAACGTCGATCTCTCTC
JMFF012I22+ GTAATTGAGAGTCGACAGTCTCTTCAAGAGACTCCATGACTCAGAACGTCGATCTCTCTC
JMFF016L12+ GTAATTGAGAGTCGACAGTCTCTTCAAGAGACTCCATGACTCAGAACGTCGATCTCTCTC
                      ____________________________________________________________
consensus GTAATTGAGAGTCGACAGTCTCTTCAAGAGACTCCATGACTCAGAACGTCGATCTCTCTC
 
. : . : . : . : . : . :
JMFF039N18+ TGGGACTCCATAAAAACCGGTAAAGCGCCAAC
JMFS088B08+ TGGGACTCCATAAAAACCGGTAAAGCGCCAACGG
JMSF048L18+ TGGGACTCCATAAAAACCGGTAAAGCGCCAACGG
JMFF012I22+ TGGGACTCCATAAAAACCGGTAAAGCGCCAACGGGAATCACCAAGGCTAAGACAGACTTC
JMFF016L12+ TGGGACTCCATAAAAACCGGTAAAGCGCCAACGGGAATCACCAAGGCTAAGACAGACTTC
                      ____________________________________________________________
consensus TGGGACTCCATAAAAACCGGTAAAGCGCCAACGGGAATCACCAAGGCTAAGACAGACTTC