Contig 001613:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004C15Sequence554001613 (5)ref|XP_002308618.1|9e-98aspartate transaminase family protein [Populus trichocarpa] gb|EEE92141.1| aspar740008306 (6)ref|XP_009762342.1|9e-130PREDICTED: aspartate aminotransferase, cytoplasmic [Nicotiana sylvestris]
JMFF007P24Sequence573001613 (5)ref|XP_010693429.1|5e-94PREDICTED: aspartate aminotransferase, cytoplasmic [Beta vulgaris subsp. vulgar769008306 (6)ref|XP_009762342.1|1e-119PREDICTED: aspartate aminotransferase, cytoplasmic [Nicotiana sylvestris]
JMFF012N21Sequence490001613 (5)ref|XP_002308618.1|1e-56aspartate transaminase family protein [Populus trichocarpa] gb|EEE92141.1| aspar417008306 (6)ref|XP_008220042.1|7e-50PREDICTED: aspartate aminotransferase, cytoplasmic [Prunus mume]
JMFF017F14Sequence592001613 (5)emb|CDP03316.1|1e-108unnamed protein product [Coffea canephora]743008306 (6)ref|XP_009782665.1|3e-101PREDICTED: aspartate aminotransferase, cytoplasmic [Nicotiana sylvestris]
JMFF041M07Sequence644001613 (5)emb|CDP03316.1|8e-99unnamed protein product [Coffea canephora]573008306 (6)ref|XP_009617506.1|3e-68PREDICTED: aspartate aminotransferase, cytoplasmic [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF017F14+ TATGAGCACATGCATGGAGAAGGACTACTGCTCCAACTGGGGCAGCACTAAGAT
JMFF004C15+ GGGCAGCACTAAGAT
JMFF041M07+ TGGGTTATGAGCACATGCATGGAGAAGGACTACTGCTCCAACT-GGGCAGCACTAAGAT
                      ____________________________________________________________
consensus TGGGTTATGAGCACATGCATGGAGAAGGACTACTGCTCCAACTGGGGCAGCACTAAGAT
 
. : . : . : . : . : . :
JMFF007P24+ CTGGAAATTCAAGCCCCGCGTTTCTGGGTTATAGTAGCGGTAGGTCT
JMFF017F14+ CATCTATCATTCCCTGGAAATTCAAGCCCCGCGTTTCTGGGTTATAGTAGCGGTAGGTCT
JMFF004C15+ CATCTATCATTCCCTGGAAATTCAAGCCCCGCGTTTCTGGGTTATAGTAGCGGTAGGTCT
JMFF041M07+ CATCTATCATTCCCTGGAAATTCAAGCCCCGCGTTTCTGGGTTATAGTAGCGGTAGGTCT
                      ____________________________________________________________
consensus CATCTATCATTCCCTGGAAATTCAAGCCCCGCGTTTCTGGGTTATAGTAGCGGTAGGTCT
 
. : . : . : . : . : . :
JMFF007P24+ TCACTGTCAATCCAGATAACGTGAAAACCTTCGGATGATTTCCCCATGTTGGCAGAGGAA
JMFF017F14+ TCACTGTCAATCCAGATAACGTGAAAACCTTCGGATGATTTCCCCATGTTGGCAGAGGAA
JMFF004C15+ TCACTGTCAATCCAGATAACGTGAAAACCTTCGGATGATTTCCCCATGTTGGCAGAGGAA
JMFF041M07+ TCACTGTCAATCCAGATAACGTGAAAACCTTCGGATGATTTCCCCATGTTGGCAGAGGAA
                      ____________________________________________________________
consensus TCACTGTCAATCCAGATAACGTGAAAACCTTCGGATGATTTCCCCATGTTGGCAGAGGAA
 
. : . : . : . : . : . :
JMFF007P24+ TGTATATAGTATGCTCATGATAGTGCCTAGCCAGGAACTCTCCACCAACCCTCAATGAAC
JMFF017F14+ TGTATATAGTATGCTCATGATAGTGCCTAGCCAGGAACTCTCCACCAACCCTCAATGAAC
JMFF004C15+ TGTATATAGTATGCTCATGATAGTGCCTAGCCAGGAACTCTCCACCAACCCTCAATGAAC
JMFF041M07+ TGTATATAGTATGCTCATGATAGTGCCTAGCCAGGAACTCTCCACCAACCCTCAATGAAC
JMFF012N21+ CTCAATGAAC
                      ____________________________________________________________
consensus TGTATATAGTATGCTCATGATAGTGCCTAGCCAGGAACTCTCCACCAACCCTCAATGAAC
 
. : . : . : . : . : . :
JMFF007P24+ CAGTTCCAGACAAGCATTGGACAGTAGTCACCCTGCCCTCTTGAATGGCACGGCAATCAG
JMFF017F14+ CAGTTCCAGACAAGCATTGGACAGTAGTCACCCTGCCCTCTTGAATGGCACGGCAATCAG
JMFF004C15+ CAGTTCCAGACAAGCATTGGACAGTAGTCACCCTGCCCTCTTGAATGGCACGGCAATTAG
JMFF041M07+ CAGTTCCAGACAAGCATTGGACAGTAGTCACCCTGCCCTCTTGAATGGCACGGCAATCAG
JMFF012N21+ CAGTTCCAGACAAGCATTGGACAGTAGTCACCCTGCCCTCTTGAATGGCACGGCAATCAG
                      ____________________________________________________________
consensus CAGTTCCAGACAAGCATTGGACAGTAGTCACCCTGCCCTCTTGAATGGCACGGCAATCAG
 
. : . : . : . : . : . :
JMFF007P24+ CACCAAATATTAGCTTTGCACTCAGTTTGTTAAACTCCGTCAGTCCAGTGATGGGTAGAT
JMFF017F14+ CACCAAATATTAGCTTTGCACTCAGTTTGTTAAACTCCGTCAGTCCAGTGATGGGTAGAT
JMFF004C15+ CACCAAATATTAGCTTTGCACTCAGTTTGTTAAACTCCGTCAGTCCAGTGATGGGTAGAT
JMFF041M07+ CACCAAATATTAGCTTTGCACTCAGTTTGTTAAACTCCGTCAGTCCAGTGATGGGTAGAT
JMFF012N21+ CACCAAATATTAGCTTTGCACTCAGTTTGTTAAACTCCGTCAGTCCAGTGATGGGTAGAT
                      ____________________________________________________________
consensus CACCAAATATTAGCTTTGCACTCAGTTTGTTAAACTCCGTCAGTCCAGTGATGGGTAGAT
 
. : . : . : . : . : . :
JMFF007P24+ ACTCTTTCACACGAGCCTTATTGCTTACAAGGATTTCCTCAGCCCGCTTCACCACATTAA
JMFF017F14+ ACTCTCTCACACGAGCCTTATTGCTTACAAGGATTTCCTCAGCCCGCTTCACCACATTAA
JMFF004C15+ ACTCTTTCACACGAGCCTTATTGCTTACAAGGATTTCCTAAGCCCGCTTCACCACATTAA
JMFF041M07+ ACTCTTTCACACGAGCCTTATTGCTTACAAGGATTTCCTCAGCCCGCTTCACCACATTAA
JMFF012N21+ ACTCTTTCACACGAGCCTTATTGCTTACAAGGATTTCCTCAGCCCGCTTCACCACATTAA
                      ____________________________________________________________
consensus ACTCTTTCACACGAGCCTTATTGCTTACAAGGATTTCCTCAGCCCGCTTCACCACATTAA
 
. : . : . : . : . : . :
JMFF007P24+ GAACAAGGGGCTTCCCTTCCTCAGTTCGATAAGCGCCAACGCCCAAATTCAGCTTTACTG
JMFF017F14+ GAACAAGGGGCTTCCCTTCCTCAGTTCGATAAGCGCCAACGCCCAAATTCAGCTTTACTG
JMFF004C15+ GAACAAGGGGCTTCCCTTCCTCAGTTCGATAAGCGCCAACGCCCAAATTCAGCTTTACTG
JMFF041M07+ GAACAAGGGGCTTCCCTTCCTCAGTTCGATAAGCGCCAACGCCCAAATTCAGCTTTACTG
JMFF012N21+ GAACAAGGGGCTTCCCTTCCTCAGTTCGATAAGCGCCAACGCCCAAATTCAGCTTTACTG
                      ____________________________________________________________
consensus GAACAAGGGGCTTCCCTTCCTCAGTTCGATAAGCGCCAACGCCCAAATTCAGCTTTACTG
 
. : . : . : . : . : . :
JMFF007P24+ GGCTAGGATCGCTGTTGTAAGCAACAGTGACCCCAAGGATTGGATCTTCATGGGCACGAG
JMFF017F14+ GGCTAGGATCGCTGTTGTAAGCAACAGTGACCCCAAGGATTGGATCTTCATGGGCACGAG
JMFF004C15+ GGCTAGGATCGCTGTTGTAAGCAACAGTGACCCCAAGGATTGGATCTTCATGGGCACGAG
JMFF041M07+ GGCTAGGATCGCTGTTGTAAGCAACAGTGACCCCAAGGATTGGATCTTCATGGGCACGAG
JMFF012N21+ GGCTAGGATCGCTGTTGTAAGCAACAGTGACCCCAAGGATTGGATCTTCATGGGCACGAG
                      ____________________________________________________________
consensus GGCTAGGATCGCTGTTGTAAGCAACAGTGACCCCAAGGATTGGATCTTCATGGGCACGAG
 
. : . : . : . : . : . :
JMFF007P24+ CAACATGGGAAAAGGCGGAATCAGAGGGAGCTGACATTTTCACAAGTAAATTTTTTATGA
JMFF017F14+ CAACATGGGAAAAGGCGGAATCAGAGGGAGCTGACATTTTCACAAGTAAATTTTTTAT
JMFF004C15+ CAACATGGGAAAAGGCGGAATCAGAGGGAGCTGACATTTTCACAAGTAAATTTTTTAT
JMFF041M07+ CAACATGGGAAAAGGCGGAATCAGAGGGAGCTGACATTTTCACAAGTAAATTTTTTATGA
JMFF012N21+ CAACATGGGAAAAGGCGGAATCAGAGGGAGCTGACATTTTCACAAGTAAATTTTTTATGA
                      ____________________________________________________________
consensus CAACATGGGAAAAGGCGGAATCAGAGGGAGCTGACATTTTCACAAGTAAATTTTTTATGA
 
. : . : . : . : . : . :
JMFF007P24+ TCAGAAAACTTGAGATGAATCGCTATATATAGAGGTAGAAGAAAGT
JMFF041M07+ TCAGAAAACTTGAGATGAATCGCTATATATAGAGGTAGAAGAAAGT
JMFF012N21+ TCAGAAAACTTGAGATGAATCGCTATACATAGAGGTAGAAGAAAGTATGTATAAAGTATA
                      ____________________________________________________________
consensus TCAGAAAACTTGAGATGAATCGCTATATATAGAGGTAGAAGAAAGTATGTATAAAGTATA
 
. : . : . : . : . : . :
JMFF012N21+ TTCCAGTGAGAATTATTGTGAGTAGAATGGAGGATGCGTGAAAACTGAAAAAGTATAGTT
                      ____________________________________________________________
consensus TTCCAGTGAGAATTATTGTGAGTAGAATGGAGGATGCGTGAAAACTGAAAAAGTATAGTT