Contig 001609:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012C04Sequence541001609 (7)607000419 (8)ref|XP_009104154.1|8e-19PREDICTED: serine/threonine-protein kinase SRK2A [Brassica rapa] emb|CDY46190.1|
JMFF012I21Sequence551001609 (7)ref|XP_009348751.1|8e-100PREDICTED: serine/threonine-protein kinase SRK2A [Pyrus x bretschneideri]682000419 (8)gb|KDO50087.1|7e-41hypothetical protein CISIN_1g0187341mg, partial [Citrus sinensis] gb|KDO50088.1|
JMFF028B09Sequence551001609 (7)ref|XP_009348751.1|7e-105PREDICTED: serine/threonine-protein kinase SRK2A [Pyrus x bretschneideri]765000419 (8)ref|XP_003540159.1|6e-50PREDICTED: serine/threonine-protein kinase SRK2A-like [Glycine max]
JMFF039L08Sequence540001609 (7)679000419 (8)ref|XP_006384980.1|1e-39hypothetical protein POPTR_0004s22770g [Populus trichocarpa] gb|ERP62777.1| hypo
JMFF050E24Sequence631001609 (7)emb|CAE54076.1|3e-22serine/threonine-protein kinase [Fagus sylvatica]645000419 (8)emb|CBI29763.3|2e-18unnamed protein product [Vitis vinifera]
JMFS119C06Sequence621001609 (7)ref|XP_009348751.1|3e-112PREDICTED: serine/threonine-protein kinase SRK2A [Pyrus x bretschneideri]
JMSF010A14Sequence228001609 (7)720000419 (8)ref|XP_009776074.1|5e-58PREDICTED: serine/threonine-protein kinase SRK2A [Nicotiana sylvestris] gb|AAL89

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF012I21+ GAGATAGAACCTCTGGAGCAATATAAGCTGGAGTGCCAACAG
JMFF028B09+ GCCGTCATACTCTCTCCGAGATAGAACCTCTGGAGCAATATAAGCTGGAGTGCCAACAG
                      ____________________________________________________________
consensus GCCGTCATACTCTCTCCGAGATAGAACCTCTGGAGCAATATAAGCTGGAGTGCCAACAG
 
. : . : . : . : . : . :
JMFF012I21+ TCGATTTTGGTCTTGAATGCAGCAGAGATGACTAGGTACAGGGGTAGAGAAAAATGAGCA
JMFF028B09+ TCGATTTTGGTCTTGAATGCAGCAGAGATGACTAGGTACAGGGGTAGAGAAAAATGAGCA
                      ____________________________________________________________
consensus TCGATTTTGGTCTTGAATGCAGCAGAGATGACTAGGTACAGGGGTAGAGAAAAATGAGCA
 
. : . : . : . : . : . :
JMFF012I21+ GCCAACTCTTCTATCAAATGTTACCACGTAATATACATACCTTTGAGTAGCCAAAATCAC
JMFF028B09+ GCCAACTCTTCTATCAAATGTTACCACGTAATATACATACCTTTGAGTAGCCAAAATCAC
JMFS119C06+ GAGTAGCCAAAATCAC
                      ____________________________________________________________
consensus GCCAACTCTTCTATCAAATGTTACCACGTAATATACATACCTTTGAGTAGCCAAAATCAC
 
. : . : . : . : . : . :
JMFF012I21+ AAATCTTCAGGCGAGGCGCCGGGCTTCCATCCAAGAGGGTATTCTCCAGCTTCAGATCTC
JMFF028B09+ AAATCTTCAGGCGAGGCGCCGGGCTTCCATCCAAGAGGGTATTCTCCAGCTTCAGATCTC
JMFS119C06+ AAATCTTAAGACGTGGTGCGGCACTCCCATCCAGTAGGGTATTCTCCAGCTTTAGGTCTC
                      ____________________________________________________________
consensus AAATCTTCAGGCGAGGCGCCGGGCTTCCATCCAAGAGGGTATTCTCCAGCTTCAGATCTC
 
. : . : . : . : . : . :
JMFF012I21+ TATGACATATTTGCAAAGAGTGACAGTAGCTGACTCCAGAAATAAGCTGCTGGAAGAAGT
JMFF028B09+ TATGACATATTTGCAAAGAGTGACAGTAGCTGACTCCAGAAATAAGCTGCTGGAAGAAGT
JMFS119C06+ GATGACATATTTGCAAAGAGTGACAGTAGCTGACTCCTGAAATAAGCTGCTGGAAGCTGT
                      ____________________________________________________________
consensus TATGACATATTTGCAAAGAGTGACAGTAGCTGACTCCAGAAATAAGCTGCTGGAAGAAGT
 
. : . : . : . : . : . :
JMFF012I21+ ACCTAGCCTCATCCTCACTGAATCTTCCCACATTGCAGATGCGTTCAAAGAGCTCTCCAC
JMFF028B09+ ACCTAGCCTCATCCTCACTGAATCTTCCCACATTGCAGATGCGTTCAAAGAGCTCTCCAC
JMFS119C06+ ACCTAGCCTCGTCTTCACTGAACCTTCCCGCATTGCAGATTCGATCAAAAAGCTCTCCAC
                      ____________________________________________________________
consensus ACCTAGCCTCATCCTCACTGAATCTTCCCACATTGCAGATGCGTTCAAAGAGCTCTCCAC
 
. : . : . : . : . : . :
JMFF012I21+ CTGCTGCATATTCCATTACAATGGCAAGATGAGTGGGAGTCAGAACCACCTCCTTGAACC
JMFF028B09+ CTGCTGCATATTCCATTACAATGGCAAGATGAGTGGGAGTCAGAACCACCTCCTTGAACC
JMFS119C06+ CTGCTGCATATTCCATGACAATGGCAAGATGAGTAGGAGTCAATATGACCTCCTTGAACC
                      ____________________________________________________________
consensus CTGCTGCATATTCCATTACAATGGCAAGATGAGTGGGAGTCAGAACCACCTCCTTGAACC
 
. : . : . : . : . : . :
JMFF012I21+ GAATGATGTTCGGGTGACGAAGTGATCTGTGGTTTATGATCTCCCGTGCCACATTCTCAT
JMFF028B09+ GAATGATGTTCGGGTGACGAAGTGATCTGTGGTTTATGATCTCCCGTGCCACATTCTCAT
JMFS119C06+ GAATTATGTTTGGGTGTCGCAGTGATCTATGGTTTATGATCTCCCTGGCCACATTCTCAT
JMFF050E24+ TTATGATCTCCCGTGCCACATTCTCAT
                      ____________________________________________________________
consensus GAATGATGTTCGGGTGACGAAGTGATCTGTGGTTTATGATCTCCCGTGCCACATTCTCAT
 
. : . : . : . : . : . :
JMFF012I21+ CAATCTTAAGTCCTCTCTCGATGTACTTCATGGCCACAAGCTCCTTTGTCTCCTTGTTCC
JMFF028B09+ CAATCTTAAGTCCTCTCTCGATGTACTTCATGGCCACAAGCTCCTTTGTCTCCTTGTTCC
JMFS119C06+ CAATCTTAAAGCCTCTTTCTATGTACTTCATGGCCACGAGCTCCTTCGTCTCCTTGTTCC
JMFF050E24+ CAATCTTAAGTCCTCTCTCGATGTACTTCATGGCCACAAGCTCCTTNGTCTCCTTGTTCC
                      ____________________________________________________________
consensus CAATCTTAAGTCCTCTCTCGATGTACTTCATGGCCACAAGCTCCTTTGTCTCCTTGTTCC
 
. : . : . : . : . : . :
JMFF012I21+ TCATAAGCCT
JMFF028B09+ TCATAAGCCT
JMFS119C06+ TCATGAGCCTCGCCACGCCGAAATTCCCGGAACCTATATCCTTAACAAGCTCGTATTTCT
JMFF050E24+ TCATAAGCCTGGCCACACCGAAATTACCAGACCCAATATCCTTAACAAGCCCATATTTCT
JMFF039L08+ TCATAAGCCTGGCCACACCGAAATTACCAGACCCAATATCCTTAACAAGCCCATATTTCT
JMFF012C04+ TCATAAGCCTGGCCACACCGAAATTACCAGACCCAATATCCTTAACAAGCTCATATTTCT
                      ____________________________________________________________
consensus TCATAAGCCTGGCCACACCGAAATTACCAGACCCAATATCCTTAACAAGCTCATATTTCT
 
. : . : . : . : . : . :
JMFS119C06+ CCATTT
JMFF050E24+ CCATTTTTTCCTTCTAATTTCGCACCTTTTAGCTCAACTACAACGAACTGCAATTTAAAT
JMFF039L08+ CCATTTTTTCCTTCTAATTTCGCACCTTTTAGCTCAACTACAACGAACTGCAATTTAAAT
JMFF012C04+ CCATTTTTTCCTTCTAATTTCGCACCTTTTAGCTCAACTACAACGAACTGCAATTTAAAT
                      ____________________________________________________________
consensus CCATTTTTTCCTTCTAATTTCGCACCTTTTAGCTCAACTACAACGAACTGCAATTTAAAT
 
. : . : . : . : . : . :
JMFF050E24+ CTGCTAAAGTTTCAACCTTTAAGCACTACTTAAACTGGAAACAAGAATAATTTTCCACCC
JMFF039L08+ CTGCTAAAGTTTCAACCTTTAAGCACTACTTAAACTGGAAACAAGAATAATTTTCCACCC
JMSF010A14+ CTAAAGTTTCAACCTTTAAGCACTACTTAAACTGGAAACAAGAATAATTTTCCACCC
JMFF012C04+ CTGCTAAAGTTTCAACCTTTAAGCACTACTTAAACTGGAAACAAGAATAATTTTCCACCC
                      ____________________________________________________________
consensus CTGCTAAAGTTTCAACCTTTAAGCACTACTTAAACTGGAAACAAGAATAATTTTCCACCC
 
. : . : . : . : . : . :
JMFF050E24+ AGAAGCTCGAATTCGAAAAACCACAACTAAGCAAAACAGAATTTCACCAATTTATAGCTG
JMFF039L08+ AGAAGCTCGAATTCGAAAAACCACAACTAAGCAAAACAGAATTTCACCAATTTATAGCTG
JMSF010A14+ AGAAGCTCGAATTCGAAAAACCACAACTAAGCAAAACAGAATTTCACCAATTTATAGCTG
JMFF012C04+ AGAAGCTCGAATTCGAAAAACCACAACTAAGCAAAACAGAATTTCACCAATTTATAGCTG
                      ____________________________________________________________
consensus AGAAGCTCGAATTCGAAAAACCACAACTAAGCAAAACAGAATTTCACCAATTTATAGCTG
 
. : . : . : . : . : . :
JMFF050E24+ AATCAGGGGGAATCAACAGAACATCCGGAAGTCGGCAAAGGAGAGATTTGGGTTTACAGC
JMFF039L08+ AATCAGGGGGAATCAACAGAACATCCGGAAGTCGGCAAAGGAGAGATTTGGGTTTACAGC
JMSF010A14+ AATCAGGGGGAATCAACAGAACATCCGGAAGTCGGCAAAGGAGAGATTTGGGTTTACAGC
JMFF012C04+ AATCAGGGGGAATCAACAGAACATCCGGAAGTCGGCAAAGGAGAGATTTGGGTTTACAGC
                      ____________________________________________________________
consensus AATCAGGGGGAATCAACAGAACATCCGGAAGTCGGCAAAGGAGAGATTTGGGTTTACAGC
 
. : . : . : . : . : . :
JMFF050E24+ GGATTCCACGATCAGAAGGGAAAAGAATGGTATTTGCAGCTGCTTTCCACAGAGACTTGA
JMFF039L08+ GGATTCCACGATCAGAAGGGAAAAGAATGGTATTTGCAGCTGCTTTCCACAGAGACTTGA
JMSF010A14+ GGATTCCACGATCAGAAGGGAAAAGAATGGTATTTGCAGCTGCTTTCC
JMFF012C04+ GGATTCCACGATCAGAAGGGAAAAGAATGGTATTTGCAGCTGCTTTCCACAGAGACTTGA
                      ____________________________________________________________
consensus GGATTCCACGATCAGAAGGGAAAAGAATGGTATTTGCAGCTGCTTTCCACAGAGACTTGA
 
. : . : . : . : . : . :
JMFF050E24+ GAAAAAGCAAAGGAATTTTGAAGATCACGGGTGGGTGATGGGATTGGGAGGAGTATGGGC
JMFF039L08+ GAAAAAGCAAAGGAATTTTGAAGATCACGGGTGGGTGATGGGATTGGGAGGAGTATGGGC
JMFF012C04+ GAAAAAGCAAAGGAATTTTGAAGATCACGGGTGGGTGATGGGATTGGGAGGAGTATGGGC
                      ____________________________________________________________
consensus GAAAAAGCAAAGGAATTTTGAAGATCACGGGTGGGTGATGGGATTGGGAGGAGTATGGGC
 
. : . : . : . : . : . :
JMFF050E24+ GGTGGCAGAAAGAAAAGATTCCCGGAATTTCAGAGAAGTCTATTATTAGATGAGAACATG
JMFF039L08+ GGTGGCAGAAAGAAAAGATTCCCGGAATTTCAGAGAAGTCTATTATTAGATGAGAACATG
JMFF012C04+ GGTGGCAGAAAGAAAAGATTCCCGGAATTTCAGAGAAGTCTATTATTAGATGAGAACATG
                      ____________________________________________________________
consensus GGTGGCAGAAAGAAAAGATTCCCGGAATTTCAGAGAAGTCTATTATTAGATGAGAACATG
 
. : . : . : . : . : . :
JMFF050E24+ GAAAGAAAAACCGATGGTCTAATAAAGATAGTGAGAGAAGTGATGAGAAATGAGAATATC
JMFF039L08+ GAAAGAAAAACCGATGGTCTAATAAAGATAGTGAGAGAAGTGATGAGAAATGAGAATATC
JMFF012C04+ GAAAGAAAAACCGATGGTCTAATAAAGATAGTGAGAGAAGTGATGAGAAATGAGAATATC
                      ____________________________________________________________
consensus GAAAGAAAAACCGATGGTCTAATAAAGATAGTGAGAGAAGTGATGAGAAATGAGAATATC