Contig 001578:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006N13Sequence483001578 (7)ref|XP_006352525.1|8e-20PREDICTED: ethylene-responsive transcription factor 3-like [Solanum tuberosum]571001578 (7)ref|XP_009770784.1|9e-33PREDICTED: ethylene-responsive transcription factor 3-like [Nicotiana sylvestri
JMFF050M06Sequence569001578 (7)ref|XP_009770784.1|4e-23PREDICTED: ethylene-responsive transcription factor 3-like [Nicotiana sylvestri601001578 (7)ref|XP_009770784.1|3e-21PREDICTED: ethylene-responsive transcription factor 3-like [Nicotiana sylvestri
JMFN005N20Sequence617001578 (7)ref|XP_009770784.1|2e-40PREDICTED: ethylene-responsive transcription factor 3-like [Nicotiana sylvestri
JMFN037P15Sequence610001578 (7)gb|AET99099.1|2e-26ethylene response factor 2 [Solanum tuberosum]
JMFN041J02Sequence630001578 (7)gb|AET99099.1|1e-25ethylene response factor 2 [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF050M06- TCCATCGCCGGCGGCAGGTTGAGATCG
rJMFF006N13- GCTGTGGAGTGAANATCGCAGACGTCATCCATCGCCGGCGGNAGGTTGAGATCG
JMFN005N20+ TCCATCGCCGGCGGCAGGTTGAGATCG
                      ____________________________________________________________
consensus GCTGTGGAGTGAANATCGCAGACGTCATCCATCGCCGGCGGCAGGTTGAGATCG
 
. : . : . : . : . : . :
rJMFF050M06- AAACACAATGGTTTTCTGAAAGACGATGAAGCGATGTTTTCACAGTCCCCGTCGTCGACA
rJMFF006N13- AAACACNATGGTTTTCTGAAAGACGATGAANCGATGTTTTCACAGTCCCCGTCGTCGACA
JMFN005N20+ AAACACAATGGTTTTCTGAAAGACGATGAAGCGATGTTTTCACAGTCCCCGTCGTCGACA
                      ____________________________________________________________
consensus AAACACAATGGTTTTCTGAAAGACGATGAAGCGATGTTTTCACAGTCCCCGTCGTCGACA
 
. : . : . : . : . : . :
rJMFF050M06- ACAGACGACGAAGAATCGCAGTCGCTATGACAATCATCCGGAGCTATTGGAGGCGACCTC
rJMFF006N13- ACAGACGACGAATAATCGCAGTCGCTATGACAATCATCCGGAGCTATTGGAGGCGACCTC
JMFN005N20+ ACAGACGACGAAGAATCGCAGTCGCTATGACAATCATCCGGAGCTATTGGAGGCGACCTC
                      ____________________________________________________________
consensus ACAGACGACGAAGAATCGCAGTCGCTATGACAATCATCCGGAGCTATTGGAGGCGACCTC
 
. : . : . : . : . : . :
rJMFF050M06- GGGTGGCGGCGATTAGGCGTCGCCGCCGTCTGCGGCGGCGGAGGCGGCCTTGGCCCACTG
rJMFF006N13- GGGTGGCGGNGATTAGGCGTCGCCGCCGNCTGCGGCGGCGGAGGCGGCCTTGGCCCACTG
JMFN005N20+ GGGTGGCGGCGATTAGGCGTCGCCGCCGTCTGCGGCGGCGGAGGCGGCCTTGGCCCACTG
JMFN037P15+ GGCGGCGGAGGCGGCCTTGGCCCACTG
JMFN041J02+ TCGCCGCCGTCTGCGGCGGCGGAGGCGGCCTTGGCCCACTG
                      ____________________________________________________________
consensus GGGTGGCGGCGATTAGGCGTCGCCGCCGTCTGCGGCGGCGGAGGCGGCCTTGGCCCACTG
 
. : . : . : . : . : . :
rJMFF050M06- AAAGACTCCACCGTGCTACTCATGCTGCTGGAGGCGGGTCGGGGTCTCTGGGAAATCGTA
rJMFF006N13- AAANACTCCACCGTGCTACTCATGCTGCTGGAGGCGGGTCGGGGTCTCTGGGAAATCNTA
JMFN005N20+ AAAGACTCCACCGTGCTACTCATGCTGCTGGAGGCGGGTCGGGGTCTCTGGGAAATCGTA
JMFN037P15+ AAAGACTCCACCGTGCTACTCATGCTGCTGGAGGCGGGTCGGGGTCTCTGGGAAATCGTA
JMFN041J02+ AAAGACTCCACCGTGCTACTCATGCTGCTGGAGGCGGGTCGGGGTCTCTGGGAAATCGTA
JMFF050M06+ GGGAAATCGTA
                      ____________________________________________________________
consensus AAAGACTCCACCGTGCTACTCATGCTGCTGGAGGCGGGTCGGGGTCTCTGGGAAATCGTA
 
. : . : . : . : . : . :
rJMFF050M06- TGAGGATCCTGACCGTGCATCAGGGAACCGATGAACGGATTTTTAGGGATTGAGGTCTGG
rJMFF006N13- TGANGATCCTGACCGTGCATCAAGGAACCGATGAACGGATTTTTAAGGATTGAGGTCTGG
JMFN005N20+ TGAGGATCCTGACCGTGCATCAGGGAACCGATGAACGGATTTTTAGGGATTGAGGTCTGG
JMFN037P15+ TGAGGATCCTGACCGTGCATCAGGGAACCGATGAACGGATTTTTAGGGATTGAGGTCTGG
JMFN041J02+ TGAGGATCCTGACCGTGCATCAGGGAACCGATGAACGGATTTTTAGGGATTGAGGTCTGG
JMFF050M06+ TGAGGATCCTGACCGTGCATCAGGGAACCGATGAACGGATTTTTAGGGATTGAGGTCTGG
JMFF006N13+ TGG
                      ____________________________________________________________
consensus TGAGGATCCTGACCGTGCATCAGGGAACCGATGAACGGATTTTTAGGGATTGAGGTCTGG
 
. : . : . : . : . : . :
rJMFF050M06- TTGTAAGGAGGTAGTTGAGAAGTCGCCGGAGGTGGGAAGTTGGTCTTGGCTTTCGGGCCT
rJMFF006N13- TTGTAAGGANGTAGTTGAGAAGTCGCCGGAGGTGGGAAGTTGGTCTTGGCTTTCGGGCCT
JMFN005N20+ TTGTAAGGAGGTAGTTGAGAAGTCGCCGGAGGTGGGAAGTTGGTCTTGGCTTTCGGGCCT
JMFN037P15+ TTGTAAGGAGGTAGTTGAGAAGTCGCCGGAGGTGGGAAGTTGGTCTTGGCTTTCGGGCCT
JMFN041J02+ TTGTAAGGAGGTAGTTGAGAAGTCGCCGGAGGTGGGAAGTTGGTCTTGGCTTTCGGGCCT
JMFF050M06+ TNGTAAGGAGGTAGTTGAGAAGTCGCCGGAGGTGGGAAGTTGGTCTTGGCTTTCGGGCCT
JMFF006N13+ TTGTAAGGAGGTAGTTGAGAAGTCGCCGGAGGTGGGAAGTTGGTCTTGGCTTTCGGGCCT
                      ____________________________________________________________
consensus TTGTAAGGAGGTAGTTGAGAAGTCGCCGGAGGTGGGAAGTTGGTCTTGGCTTTCGGGCCT
 
. : . : . : . : . : . :
rJMFF050M06- TTTAGTTTCCTGGCGGCGGCGTCGTATGCTCGAGCGGCTTCCTCGGCGGAGAGAAAGGTC
rJMFF006N13- TTTAGTTTCCTGGCGGCGGCGTCTNATGCTCGAGCGGCTTCCTCGGNGNANAGANAGGTC
JMFN005N20+ TTTAGTTTCCTGGCGGCGGCGTCGTATGCTCGAGCGGCTTCCTCGGCGGAGAGAAAGGTC
JMFN037P15+ TTTAGTTTCCTGGCGGCGGCGTCGTATGCTCGAGCGGCTTCCTCGGCGGAGAGAAAGGTC
JMFN041J02+ TTTAGTTTCCTGGCGGCGGCGTCGTATGCTCGAGCGGCTTCCTCGGCGGAGAGAAAGGTC
JMFF050M06+ TTTAGTTTCCTGGCGGCGGCGTCGTATGCTCGAGCGGCTTCCTCGGCGGAGAGAAAGGTC
JMFF006N13+ TTTAGTTTCCTGGCGGCGGCGTCGTATGCTCGAGCGGCTTCCTCGGCGGAGAGAAAGGTC
                      ____________________________________________________________
consensus TTTAGTTTCCTGGCGGCGGCGTCGTATGCTCGAGCGGCTTCCTCGGCGGAGAGAAAGGTC
 
. : . : . : . : . : . :
rJMFF050M06- CCCAGCCATAGACGGGTCTTCTTCA
rJMFF006N13- CCCANNCATAGACGGGTCTTCTTCAACGGGTCTCTGATCTCGGCCGCNAATTTACCCCAN
JMFN005N20+ CCCAGCCATAGACGGGTCTTCTTCAACGGGTCTCTGATCTCGGCCGCGAATTTACCCCAC
JMFN037P15+ CCCAGCCATAGACGGGTCTTCTTCAACGGGTCTCTGATCTCGGCCGCGAATTTACCCCAC
JMFN041J02+ CCCAGCCATAGACGGGTCTTCTTCAACGGGTCTCTGATCTCGGCCGCGAATTTACCCCAC
JMFF050M06+ CCCAGCCATAGACGGGTCTTCTTCAACGGGTCTCTGATCTCGGCCGCGAATTTACCCCAC
JMFF006N13+ CCCAGCCATAGACGGGTCTTCTTCAACGGGTCTCTGATCTCGGCCGCGAATTTACCCCAC
                      ____________________________________________________________
consensus CCCAGCCATAGACGGGTCTTCTTCAACGGGTCTCTGATCTCGGCCGCGAATTTACCCCAC
 
. : . : . : . : . : . :
rJMFF006N13- GCTCTCTTTCTAACCCCGCGGAATCTTACCTCTTTA
JMFN005N20+ GCTCTCTTTCTAACCCCGCGGAATCTTACCTCTTTAAGCTCACCGGATCCGAT
JMFN037P15+ GCTCTCTTTCTAACCCCGCGGAATCTTACCTCTTTAAGCTCACCGGATCCGATGGCACCT
JMFN041J02+ GCTCTCTTTCTAACCCCGCGGAATCTTACCTCTTTAAGCTCACCGGATCCGATGGCACCT
JMFF050M06+ GCTCTCTTTCTAACCCCGCGGAATCTTACCTCTTTAAGCTCACCGGATCCGATGGCACCT
JMFF006N13+ GCTCTCTTTCTAACCCCGCGGAATCTTACCTCTTTAAGCTCACCGGATCCGATGGCACCT
                      ____________________________________________________________
consensus GCTCTCTTTCTAACCCCGCGGAATCTTACCTCTTTAAGCTCACCGGATCCGATGGCACCT
 
. : . : . : . : . : . :
JMFN037P15+ CCGGCGGCGGCGGCGGCTGCTCTGCCTCTGGCCATCACCCAAAGCCAAAGAACAAACTCA
JMFN041J02+ CCGGCGGCGGCGGCGGCTGCTCTGCCTCTGGCCATCACCCAAAGCCAAAGAACAAACTCA
JMFF050M06+ CCGGCGGCGGCGGCGGCTGCTCTGCCTCTGGCCATCACCCAAAGCCAAAGAACAAGCTCA
JMFF006N13+ CCGGCGGCGGCGGCGGCTGCTCTGCCTCTGGCCATCACCCAAAGCCAAAGAACAAGCTCA
                      ____________________________________________________________
consensus CCGGCGGCGGCGGCGGCTGCTCTGCCTCTGGCCATCACCCAAAGCCAAAGAACAAGCTCA
 
. : . : . : . : . : . :
JMFN037P15+ GATTATGAAAACAAAGATATAATCAAGCATCCAGCGCCATAGAAGAAACTCTATGCTTTG
JMFN041J02+ GATTATGAAAACAAAGATATAATCAAGCATCCAGCGCCATAGAAGAAACTCTATGCTTTG
JMFF050M06+ GATTATGAAAACAAAGATATAATCAAGCATCCAGCGCCATAGAAGAAACTCTATGCTTTG
JMFF006N13+ GATTATGAAAACAAAGATATAATCAAGCATCCAGCGCCATAGAAGAAACTCTATGCTTTG
                      ____________________________________________________________
consensus GATTATGAAAACAAAGATATAATCAAGCATCCAGCGCCATAGAAGAAACTCTATGCTTTG
 
. : . : . : . : . : . :
JMFN037P15+ CTTTGCTTCTTCTTCTTCTTCCTCCCCCCACTACAGTAAAACTCAGTTTCTGTCTCCGCC
JMFN041J02+ CTTTGCTTCTTCTTCTTCTTCCTCCCCCCACTACAGTAAAACTCAGTTTCTGTCTCCGCC
JMFF050M06+ CTTTGCTTCTTCTTCTTCTTCCTCCCCCCACTACAGTAAAACTCAGTTTCTGTCTCCGCC
JMFF006N13+ CTTTGCTTCTTCTTCTTCTTCCTCCCCCCACTACAGTAAAACTCAGTTTCTGTCTCCGCC
                      ____________________________________________________________
consensus CTTTGCTTCTTCTTCTTCTTCCTCCCCCCACTACAGTAAAACTCAGTTTCTGTCTCCGCC
 
. : . : . : . : . : . :
JMFN037P15+ GTGCGCGGCGTTTGTGGATGAGTACCTAAGTAGAGACTAGAGA
JMFN041J02+ GTGCGCGGCGTTTGTGGATGAGTACCTAAGTAGAGACTAGAGA
JMFF050M06+ GTGCGCGGCGTTTGTGGATGAGTACCTAAGTAGAGACTAGAGAGAAGCTTTTAGATTGTG
JMFF006N13+ GTGCGCGGCGTTTGTGGATGAGTACCTAAGTAGAGACTAGAGAGAAGCTTTTAGATTGTG
                      ____________________________________________________________
consensus GTGCGCGGCGTTTGTGGATGAGTACCTAAGTAGAGACTAGAGAGAAGCTTTTAGATTGTG