Contig 001562:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF039P23+                              CTAGAAAAGCTATTATTGTTACCCATGTGAATGCTGAATAA
JMFF036L04+                                                                     AA
                      ____________________________________________________________
consensus                                CTAGAAAAGCTATTATTGTTACCCATGTGAATGCTGAATAA
 
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JMFF039P23+           CGACTCAGTCGATGTAACGCTCCATTCCATGGGTGCACTAGACCTGCTGCCGAATACAGA
JMFF036L04+           CGACTCAGTCGATGTAACGCTCCATTCCATGGGTGCACTAGACCTGCTGCCGAATACAGA
                      ____________________________________________________________
consensus             CGACTCAGTCGATGTAACGCTCCATTCCATGGGTGCACTAGACCTGCTGCCGAATACAGA
 
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JMFF039P23+           GAATGGAATTCGATTGGGATCGTAGCCCGAAGGCTGGCCTATGGGTATCATGGCCCATTT
JMFF036L04+           GAATGGAATTCGATTGGGATCGTAGCCCGAAGGCT-GCCTATGGGTATCATGGCCCATTT
JMFF004D07+                                                 CTATGGGTATCATGGCCCATTT
                      ____________________________________________________________
consensus             GAATGGAATTCGATTGGGATCGTAGCCCGAAGGCTGGCCTATGGGTATCATGGCCCATTT
 
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JMFF039P23+           ATGTGGACTAGTTGAAATATCTGGATAGGATACAGGGATAGGTGACTGTGGTTCCGGGCT
JMFF036L04+           ATGTGGACTAGTTGAAATATCTGGATAGGATACAGGGATAGGTGACTGTGGTTCCGGGCT
JMFF004D07+           ATGTGGACTAGTTGAAATATCTGGATAGGATACAGGGATAGGTGACTGTGGTTCCGGGCT
                      ____________________________________________________________
consensus             ATGTGGACTAGTTGAAATATCTGGATAGGATACAGGGATAGGTGACTGTGGTTCCGGGCT
 
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JMFF039P23+           GTCAGGTTCATCATCATAGCAACAAGGGGGGGAAGAAGAAGAAGAAGAAGAGGAAGAGGA
JMFF036L04+           GTCAGGTTCATCATCATAGCAACAAGGGGGGGAAGAAGAAGAAGAAGAAGAGGAAGAGGA
JMFF004D07+           GTCAGGTTCATCATCATAGCAACAAGGGGGGGAAGAAGAAGAAGAAGAAGAGGAAGAGGA
                      ____________________________________________________________
consensus             GTCAGGTTCATCATCATAGCAACAAGGGGGGGAAGAAGAAGAAGAAGAAGAGGAAGAGGA
 
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JMFF039P23+           GGGGGATTCTACAGGTGAGGATAAAGAAGAGGAGGAACCAGAAGTTGTGCATTCAAGAAG
JMFF036L04+           GGGGGATTCTACAGGTGAGGATAAAGAAGAGGAGGAACCAGAAGTTGTGCATTCAAGAAG
JMFF004D07+           GGGGGATTCTACAGGTGAGGATAAAGAAGAGGAGGAACCAGAAGTTGTGCATTCAAGAAG
                      ____________________________________________________________
consensus             GGGGGATTCTACAGGTGAGGATAAAGAAGAGGAGGAACCAGAAGTTGTGCATTCAAGAAG
 
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JMFF039P23+           CTGATCATGAACATTATTGTGCTTACTCCTATAGGGCTTTCCTAAAGGTTCATCTTCACT
JMFF036L04+           CTGATCATGAACATTATTGTGCTTACTCCTATAGGGCTTTCCTAAAGGTTCATCTTCACT
JMFF004D07+           CTGATCATGAACATTATTGTGCTTACTCCTATAGGGCTTTCCTAAAGGTTCATCTTCACT
                      ____________________________________________________________
consensus             CTGATCATGAACATTATTGTGCTTACTCCTATAGGGCTTTCCTAAAGGTTCATCTTCACT
 
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JMFF039P23+           CCTATACCGATTCTCCATTCCCATTTT                                 
JMFF036L04+           CCTATACCGATTCTCCATTCCCATTTTCACCTTGGATTGGCACAAACCTTTTCAGGGTTG
JMFF004D07+           CCTATACCGATTCTCCATTCCCATTTTCACCTTGGATTGGCACAAACCTTTTCAGGGTTG
                      ____________________________________________________________
consensus             CCTATACCGATTCTCCATTCCCATTTTCACCTTGGATTGGCACAAACCTTTTCAGGGTTG
 
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JMFF036L04+           TTACAGATCCAAGGATACTTCTCCTCTTTAATTGTATGTTGCCTACATCAAATCCCTTCC
JMFF004D07+           TTACAGATCCAAGGATACTTCTCCTCTTTAATTGTATGTTGCCTACATCAAATCCCTTCC
                      ____________________________________________________________
consensus             TTACAGATCCAAGGATACTTCTCCTCTTTAATTGTATGTTGCCTACATCAAATCCCTTCC
 
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JMFF036L04+           CTTCCCTTCATCTTCTACTTCATCCTAAGATAGGATAGAAATCCACCCATGAATATATCT
JMFF004D07+           CTTCCCTTCATCTTCTACTTCATCCTAAGATAGGATAGAAATCCACCCATGAATATATCT
                      ____________________________________________________________
consensus             CTTCCCTTCATCTTCTACTTCATCCTAAGATAGGATAGAAATCCACCCATGAATATATCT
 
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JMFF036L04+           TCATGGGAATTGGATTGGATAGATTGATAGACGTTTAAAAGATGGCGATTGGAAGAAAAG
JMFF004D07+           TCATGGGAATTGGATTGGATAGATTGATAGACGTTTAAAAGATGGCGATTGGAAGAAAAG
                      ____________________________________________________________
consensus             TCATGGGAATTGGATTGGATAGATTGATAGACGTTTAAAAGATGGCGATTGGAAGAAAAG