| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF003M24 | Sequence | 559 | 001560 (4) | ref|XP_007016405.1| | 4e-40 | Kinase superfamily protein isoform 3, partial [Theobroma cacao] gb|EOY34024.1| K | |||||
| JMFF009M05 | Sequence | 519 | 001560 (4) | ref|XP_007016405.1| | 2e-31 | Kinase superfamily protein isoform 3, partial [Theobroma cacao] gb|EOY34024.1| K | |||||
| JMFF048L20 | Sequence | 448 | 001560 (4) | ref|XP_007016405.1| | 8e-17 | Kinase superfamily protein isoform 3, partial [Theobroma cacao] gb|EOY34024.1| K | 438 | 018081 | |||
| JMSF023F04 | Sequence | 673 | 001560 (4) | gb|KDP20446.1| | 6e-101 | hypothetical protein JCGZ_05291 [Jatropha curcas] | |||||
This contig is upended
. : . : . : . : . : . :
JMSF023F04+ GCAAGCCCTTTAGCAGCTCCAA
____________________________________________________________
consensus GCAAGCCCTTTAGCAGCTCCAA
. : . : . : . : . : . :
JMSF023F04+ GAGCAACTTTCAAACGCAGATACCAAGAGAGAGGTTGGAAATACGAGCCCCTCCTGAACA
____________________________________________________________
consensus GAGCAACTTTCAAACGCAGATACCAAGAGAGAGGTTGGAAATACGAGCCCCTCCTGAACA
. : . : . : . : . : . :
JMSF023F04+ AATGGTTCTCCAAACTACCCTTGGGCATAAACTCATACACCAAAAGACGATGTTCATCCT
____________________________________________________________
consensus AATGGTTCTCCAAACTACCCTTGGGCATAAACTCATACACCAAAAGACGATGTTCATCCT
. : . : . : . : . : . :
JMSF023F04+ CTAAACAATACCCAATCAGTTTCACAAGATTCGGATGACAAAACTGCCCCAAATAGTTCA
____________________________________________________________
consensus CTAAACAATACCCAATCAGTTTCACAAGATTCGGATGACAAAACTGCCCCAAATAGTTCA
. : . : . : . : . : . :
JMSF023F04+ CTTCTGCCAGCCATTCTCTGTGCCCCTGAAAACCTTCTTGGTTTAACCGCTTTACCGCAA
____________________________________________________________
consensus CTTCTGCCAGCCATTCTCTGTGCCCCTGAAAACCTTCTTGGTTTAACCGCTTTACCGCAA
. : . : . : . : . : . :
JMSF023F04+ CTACTATGCCAGTACCAGGCCTAGATGCAGCTAGCGAGTTCTCATCAAGCCAGCCCTTAT
____________________________________________________________
consensus CTACTATGCCAGTACCAGGCCTAGATGCAGCTAGCGAGTTCTCATCAAGCCAGCCCTTAT
. : . : . : . : . : . :
JMSF023F04+ AAACCGACCCGAATCCACCTTCTCCCAGCACACTATCGGGACGGAAGTTCCTGGTGGCCA
JMFF009M05+ CCACCTTCTCCCAGCACACTATCGGGACGGAAGTTCCTGGTGGCCA
JMFF048L20+ CTATCGGGACGGAAGTTCCTGGTGGCCA
JMFF003M24+ CCACCTTCTCCCAGCACACTATCGGGACGGAAGTTCCTGGTGGCCA
____________________________________________________________
consensus AAACCGACCCGAATCCACCTTCTCCCAGCACACTATCGGGACGGAAGTTCCTGGTGGCCA
. : . : . : . : . : . :
JMSF023F04+ TTCTTAGATCAGCAAACGTAAAGCGTTTCAGATTGGGGGACTGCAAGATCTCCCCCTCAC
JMFF009M05+ TTCTTAGATCAGCAAACGTAAAGCGTTTCAGATTGGGGGACTGCAAGATCTCCCCCTCAC
JMFF048L20+ TTCTTAGATCAGCAAACGTAAAGCGTTTCAGATTGGGGGACTGCAAGATCTCCCCCTCAC
JMFF003M24+ TTCTTAGATCAGCAAACGTAAAGCGTTTCAGATTGGGGGACTGCAAGATCTCCCCCTCAC
____________________________________________________________
consensus TTCTTAGATCAGCAAACGTAAAGCGTTTCAGATTGGGGGACTGCAAGATCTCCCCCTCAC
. : . : . : . : . : . :
JMSF023F04+ TCCTGGGAGTTGGTAGCACAGAACTGCTACTTGAATTTTTCGAATCACTCCCTTCTGCGC
JMFF009M05+ TCCTGGGAGTTGGTAGCACAGAACTGCTACTTGAATTTTTCGAATCACTCCCTTCTGCGC
JMFF048L20+ TCCTGGGAGTTGGTAGCACAGAACTGCTACTTGAATTTTTCGAATCACTCCCTTCTGCGC
JMFF003M24+ TCCTGGGAGTTGGTAGCACAGAACTGCTACTTGAATTTTTCGAATCACTCCCTTCTGCGC
____________________________________________________________
consensus TCCTGGGAGTTGGTAGCACAGAACTGCTACTTGAATTTTTCGAATCACTCCCTTCTGCGC
. : . : . : . : . : . :
JMSF023F04+ TAACATATTTCGAGCTTAGCCCTGTATTAGGAGGACTTTCAGCTTTGATTCTGGCACTCA
JMFF009M05+ TAACATATTTCGAGTTTAGCCCTGTATTAGGAGGACTTTCAGCTTTGATTCTGGCACTCA
JMFF048L20+ TAACATATTTCGAGTTTAGCCCTGTATTAGGAGGACTTTCAGCTTTGATTCTGGCACTCA
JMFF003M24+ TAACATATTTCGAGTTTAGCCCTGTATTAGGAGGACTTTCAGCTTTGATTCTGGCACTCA
____________________________________________________________
consensus TAACATATTTCGAGTTTAGCCCTGTATTAGGAGGACTTTCAGCTTTGATTCTGGCACTCA
. : . : . : . : . : . :
JMSF023F04+ AGCAAATACCCATCAGAAAAGACCAGGCTTTACTCACTATCTTCTTCACCAAACTTAATT
JMFF009M05+ AGCAAATACCCATCAGAAAAGACCAGGCTTTACTCACTATCTTCTTCACCAAACTTAATT
JMFF048L20+ AGCAAATACCCATCAGAAAAGACCAGGCTTTACTCACTATCTTCTTCACCAAACTTAATT
JMFF003M24+ AGCAAATACCCATCAGAAAAGACCAGGCTTTACTCACTATCTTCTTCACCAAACTTAATT
____________________________________________________________
consensus AGCAAATACCCATCAGAAAAGACCAGGCTTTACTCACTATCTTCTTCACCAAACTTAATT
. : . : . : . : . : . :
JMSF023F04+ TTTTGCTCTCTTTCTCTTCCTCAGAGAACAAGAACAACCCAGCTCAGCTC
JMFF009M05+ TTTTGCTCTCTTTCTCTTCCTCAGAGAACAAGAACAACCCAGCTCAGCTCAGCCCTGATT
JMFF048L20+ TTTTGCTCTCTTTCTCTTCCTCAGAGAACAAGAACAACCCAGCTCAGCTCAGCCCTGATT
JMFF003M24+ TTTTGCTCTCTTTCTCTTCCTCAGAGAACAAGAACAACCCAGCTCAGCTCAGCCCTGATT
____________________________________________________________
consensus TTTTGCTCTCTTTCTCTTCCTCAGAGAACAAGAACAACCCAGCTCAGCTCAGCCCTGATT
. : . : . : . : . : . :
JMFF009M05+ ATGATTTGATCTTTATCTTTAAGAGAAGGGATTAGAGGAGTAAATGGCTGCTTTTCAGAG
JMFF048L20+ ATGATTTGATCTTTATCTTTAAGAGAAGGGATTAGAGGAGTAAATGGCTGCTTTTCAGAG
JMFF003M24+ ATGATTTGATCTTTATCTTTAAGAGAAGGGATTAGAGGAGTAAATGGCTGCTTTTCAGAG
____________________________________________________________
consensus ATGATTTGATCTTTATCTTTAAGAGAAGGGATTAGAGGAGTAAATGGCTGCTTTTCAGAG
. : . : . : . : . : . :
JMFF009M05+ GTTTCCATGAAGAAGCTGATGATAGAAAGAGGGGACGAGCTTTTGTTTGACGGTTTGACT
JMFF048L20+ GTTTCCATGAAGAAGCTGATGATAGAAAGAGGGGACGAGCTTTTGTTTGACGGTTTGACT
JMFF003M24+ GTTTCCATGAAGAAGCTGATGATAGAAAGAGGGGACGAGCTTTTGTTTGACGGTTTGACT
____________________________________________________________
consensus GTTTCCATGAAGAAGCTGATGATAGAAAGAGGGGACGAGCTTTTGTTTGACGGTTTGACT