Contig 001556:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002P12Sequence462001556 (2)gb|KDO55794.1|3e-24hypothetical protein CISIN_1g011293mg [Citrus sinensis] gb|KDO55795.1| hypotheti
JMSF018I06Sequence609001556 (2)ref|XP_009804409.1|7e-80PREDICTED: diacylglycerol kinase 5-like [Nicotiana sylvestris]806001339 (2)ref|XP_006365993.1|4e-94PREDICTED: diacylglycerol kinase 5-like isoform X1 [Solanum tuberosum]

Alignment

This contig is upended


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JMSF018I06+                                                                 AGGAAT
                      ____________________________________________________________
consensus                                                                   AGGAAT
 
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JMSF018I06+           GAGAGCACAGCCTGGGTATCTGTTCCTGGATTCTTCTTTCCCCATCCAAATGCAAACGGG
                      ____________________________________________________________
consensus             GAGAGCACAGCCTGGGTATCTGTTCCTGGATTCTTCTTTCCCCATCCAAATGCAAACGGG
 
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JMSF018I06+           AGGTTGTTTCCAGTTCCCAAAGGCATGGTAGCTATTGGTGGTGACCGAGATAGTTTGAGA
                      ____________________________________________________________
consensus             AGGTTGTTTCCAGTTCCCAAAGGCATGGTAGCTATTGGTGGTGACCGAGATAGTTTGAGA
 
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JMSF018I06+           TCAGAAACAACTCCGAGAAGCCAGCCAGCTGTGCCATCCCCGCCTGCAACAATAATTCTC
                      ____________________________________________________________
consensus             TCAGAAACAACTCCGAGAAGCCAGCCAGCTGTGCCATCCCCGCCTGCAACAATAATTCTC
 
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JMSF018I06+           AATCTCTCTTCGAGTTTTCGACTTAAAACATCACCATTGCTCTTGAGCTTTTCTAGATTC
                      ____________________________________________________________
consensus             AATCTCTCTTCGAGTTTTCGACTTAAAACATCACCATTGCTCTTGAGCTTTTCTAGATTC
 
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JMSF018I06+           AGATACAACCTACGCAAAACCTGATCAGGTGCTTCTTCTCCCAAATCAAAGACCTGGTGC
JMFF002P12+                                TGATCAGGTGCTTCTTCTCCCAAATCAAAGACCTGGTGC
                      ____________________________________________________________
consensus             AGATACAACCTACGCAAAACCTGATCAGGTGCTTCTTCTCCCAAATCAAAGACCTGGTGC
 
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JMSF018I06+           TTGTTGAGCAGAGAGCGAAAAGTGGTAAGAAGATCTCCACCCAGCTGGCCCCCACTTCTA
JMFF002P12+           TTGTTGAGCAGAGAGCGAAAAGTGGTAAGAAGATCTCCACCCAGCTGGCCCCCACTTCTA
                      ____________________________________________________________
consensus             TTGTTGAGCAGAGAGCGAAAAGTGGTAAGAAGATCTCCACCCAGCTGGCCCCCACTTCTA
 
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JMSF018I06+           GAATTGACGAACACTAGCACCGGGCAGGGTACATCCGGTAAACTCTCGGTCTCACCAACG
JMFF002P12+           GAATTGACGAACACTAGCACCGGGCAGGGTACATCCGGTAAACTCTCGGTCTCACCAACG
                      ____________________________________________________________
consensus             GAATTGACGAACACTAGCACCGGGCAGGGTACATCCGGTAAACTCTCGGTCTCACCAACG
 
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JMSF018I06+           ACCTCAGGCACAAAGATATACGTCGGAATATAGAACTCCCTTGTGATGGGATCATCGGAG
JMFF002P12+           ACCTCAGGCACAAAGATATACGTCGGAATATAGAACTCCCTTGTGATGGGATCATCGGAG
                      ____________________________________________________________
consensus             ACCTCAGGCACAAAGATATACGTCGGAATATAGAACTCCCTTGTGATGGGATCATCGGAG
 
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JMSF018I06+           AATTTAAAACTCATCACTAAATTTCAGCCTGAAATGGATGTCGATTCGTGTTTTTTTACA
JMFF002P12+           AATTTAAAACTCATCACTAAATTTCAGCCTGAAATGGATGTCGATTCGTGTTTTTTTACA
                      ____________________________________________________________
consensus             AATTTAAAACTCATCACTAAATTTCAGCCTGAAATGGATGTCGATTCGTGTTTTTTTACA
 
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JMSF018I06+           CTTTTCCGGCGCAATCAGAATCAGTATCAAAGAGTGTGAAGAGTTTCTTGGAGTATGAAA
JMFF002P12+           CTTTTCCGGCGCAATCAGAATCAGTATCAAAGAGTGTGAAGAGTTTCTTGGAGTATGAAA
                      ____________________________________________________________
consensus             CTTTTCCGGCGCAATCAGAATCAGTATCAAAGAGTGTGAAGAGTTTCTTGGAGTATGAAA
 
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JMSF018I06+           T                                                           
JMFF002P12+           TCAGATCTCGGATTCTCGGACACGAAGCGTATAACTAACCAATCCGCAATATCCGTTACT
                      ____________________________________________________________
consensus             TCAGATCTCGGATTCTCGGACACGAAGCGTATAACTAACCAATCCGCAATATCCGTTACT
 
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JMFF002P12+           TTATTCCCAGCACATTGTTGGGCAGTGGAGAGTTGACCGGTTCGGAGATTTATTTAATGC
                      ____________________________________________________________
consensus             TTATTCCCAGCACATTGTTGGGCAGTGGAGAGTTGACCGGTTCGGAGATTTATTTAATGC