clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF001M18 | Sequence | 529 | 001548 (5) | ref|XP_009592200.1| | 2e-79 | PREDICTED: ras-related protein RABH1b [Nicotiana tomentosiformis] | |||||
JMFF027J24 | Sequence | 524 | 001548 (5) | ref|XP_010559077.1| | 2e-78 | PREDICTED: ras-related protein RABH1b [Tarenaya hassleriana] | 256 | 018028 | |||
JMSF012O01 | Sequence | 376 | 005218 (7) | ref|XP_009614819.1| | 67.8 | PREDICTED: uncharacterized protein LOC104107662 [Nicotiana tomentosiformis] | 748 | 001548 (5) | ref|XP_004229706.1| | 9e-91 | PREDICTED: ras-related protein RABH1b [Solanum lycopersicum] |
JMSF028G01 | Sequence | 641 | 001548 (5) | ref|XP_006354635.1| | 7e-111 | PREDICTED: ras-related protein RABH1b-like [Solanum tuberosum] | 761 | 001548 (5) | ref|XP_004229706.1| | 2e-113 | PREDICTED: ras-related protein RABH1b [Solanum lycopersicum] |
This contig is upended
. : . : . : . : . : . :
rJMSF012O01- TATCCTTGAATCTAATAAAACTGCTTTTTGTTATACAAAA
____________________________________________________________
consensus TATCCTTGAATCTAATAAAACTGCTTTTTGTTATACAAAA
. : . : . : . : . : . :
rJMSF012O01- CTGCAAAAATCCATACAAATTTTGACCAAAAGGGGTGGCATAGGTCTATAACTGATATAG
rJMSF028G01- AAATTTTGACCAAAAGGGGTGGCATAGGTCTATAACTGATATAG
____________________________________________________________
consensus CTGCAAAAATCCATACAAATTTTGACCAAAAGGGGTGGCATAGGTCTATAACTGATATAG
. : . : . : . : . : . :
rJMSF012O01- AAATGACTCGCAAGTAAACTATAATGGTAATCTACTATATGTTCAACACTTTCTGATAGA
rJMSF028G01- AAATGACTCGCAAGTAAACTATAATGGTAATCTACTATATGTTCAACACTTTCTGATAGA
____________________________________________________________
consensus AAATGACTCGCAAGTAAACTATAATGGTAATCTACTATATGTTCAACACTTTCTGATAGA
. : . : . : . : . : . :
rJMSF012O01- TCAACAATGGCTAGGACTCAAATGCAATCAAGGACAGGCTTTACAGATCCGCTTTAGGTT
rJMSF028G01- TCAACAATGGCTAGGACTCAAATGCAATCAAGGACAGGCTTTACAGATCCGCTTTAGGTT
____________________________________________________________
consensus TCAACAATGGCTAGGACTCAAATGCAATCAAGGACAGGCTTTACAGATCCGCTTTAGGTT
. : . : . : . : . : . :
rJMSF012O01- CAAAGGCAGCATGTAAGATCCAGACACGGGATTGAGATGTTCAAACATGTTGTTAACAGG
rJMSF028G01- CAAAGGCAGCATGTAAGATCCAGACACGGGATTGAGATGTTCAAACATGTTGTTAACAGG
____________________________________________________________
consensus CAAAGGCAGCATGTAAGATCCAGACACGGGATTGAGATGTTCAAACATGTTGTTAACAGG
. : . : . : . : . : . :
rJMSF012O01- CACATCCTCCTGACTGTTGTGACTGTGCAGGATTTGTACTGCTTGACTTGAGGTTCACAT
rJMSF028G01- CACATCCTCCTGACTGTTGTGACTGTGCAGGATTTGTACTGCTTGACTTGAGGTTCACAT
____________________________________________________________
consensus CACATCCTCCTGACTGTTGTGACTGTGCAGGATTTGTACTGCTTGACTTGAGGTTCACAT
. : . : . : . : . : . :
rJMSF012O01- CAACCATGTCGTCTTGCTTAGCTGACGATAATGTCTCCATTCCTGGCAGGGCTGCAGCAA
rJMSF028G01- CAACCATGTCGTCTTGCTTAGCTGACGATAATGTCTCCATTCCTGGCAAGGCTGCAGCAA
____________________________________________________________
consensus CAACCATGTCGTCTTGCTTAGCTGACGATAATGTCTCCATTCCTGGCAGGGCTGCAGCAA
. : . : . : . : . : . :
rJMSF012O01- TTTTCCTAAATAGTGGCTTTATATTGAAGCCAGCCTTTGCACTGGTTTCAATAAACATGA
rJMSF028G01- TTTTCCTAAATAGTGGCTTTATATTGAAGCCAGCCTTTGCACTGGTTTCAATAAACATGA
JMSF028G01+ AGTGGCTTTATATTGAAGCCAGCCTTTGCACTGGTTTCAATAAACATGA
____________________________________________________________
consensus TTTTCCTAAATAGTGGCTTTATATTGAAGCCAGCCTTTGCACTGGTTTCAATAAACATGA
. : . : . : . : . : . :
rJMSF012O01- CATTTAGTTCCCGCGATTTAGCTTCTCCCTCCTCTATTGAAACTTGCCTTTTTTCAACAA
rJMSF028G01- CATTTAGTTCCCGCGATTTAGCTTCTCCCTCCTCTATTGAAACTTGCCTTTTTTCAACAA
JMSF028G01+ CATTTAGTTCCCGCGATTTAGCTTCTCCCTCCTCTATTGAAACTTGCCTTTTTTCAACAA
____________________________________________________________
consensus CATTTAGTTCCCGCGATTTAGCTTCTCCCTCCTCTATTGAAACTTGCCTTTTTTCAACAA
. : . : . : . : . : . :
rJMSF012O01- GGTCAGTTTTATTCCCAACAAGAACAATGATAACATCACTCCCACGCTCAGTTCGAACCT
rJMSF028G01- GGTCAGTTTTATTCCCAACAAGAACAATGATAACATCACTCCCACGCTCAGTTCGAACCT
JMSF028G01+ GGTCAGTTTTATTCCCAACAAGAACAATGATAACATCACTCCCACGCTCAGTTCGAACCT
JMFF027J24+ AACAAGGACAATTATAACATCACTCCCACGCTCAGTCCGAACCT
JMFF001M18+ TTCCCAACAAGGACAATTATAACATCACTCCCACGCTCAGTCCGAACCT
____________________________________________________________
consensus GGTCAGTTTTATTCCCAACAAGAACAATGATAACATCACTCCCACGCTCAGTTCGAACCT
. : . : . : . : . : . :
rJMSF012O01- CCTCAATCCACTTTGCAGTATTAAGGAAGGACTGCCTACTTGCAACATCATACACAATAA
rJMSF028G01- CCTCAATCCACTTTGCAGTATTAAGGAAGGACTGCCTACTTGCAACATCATACACAATAA
JMSF028G01+ CCTCAATCCACTTTGCAGTATTAAGGAAGGACTGCCTACTTGCAACATCATACACAATAA
JMFF027J24+ CCTCTACCCACTTTGAAGTGTTAAGGAAAGACTGCCGGCTTGCAACATCATACACAATAA
JMFF001M18+ CCTCTACCCACTTTGAAGTGTTAAGGAAAGACTGCCGGCTTGCAACATCATACACAATAA
____________________________________________________________
consensus CCTCAATCCACTTTGCAGTATTAAGGAAGGACTGCCTACTTGCAACATCATACACAATAA
. : . : . : . : . : . :
rJMSF012O01- CAGCAACAGATGAGTCCCTGATGTAGCTTGGTATAAGACTCCTAAATCTCTCTTGCCCTG
rJMSF028G01- CAGCAACAGATGAGTCCCTGATGTAGCTTGGTATAAGACTCCTAAATCTCTCTTGCCCTG
JMSF028G01+ CAGCAACAGATGAGTCCCTGATGTAGCTTGGTATAAGACTCCTAAATCTCTCTTGCCCTG
JMFF027J24+ CAGCAACAGATGAGTCCCTAATATAGCTGGGTATAAGACTCCTGAATCTCTCTTGCCCTG
JMFF001M18+ CAGCAACAGATGAGTCCCTAATATAGCTGGGTATAAGACTCCTGAATCTCTCTTGCCCTG
____________________________________________________________
consensus CAGCAACAGATGAGTCCCTGATGTAGCTTGGTATAAGACTCCTAAATCTCTCTTGCCCTG
. : . : . : . : . : . :
rJMSF012O01- CAGTATCCCAANGCTGCAGTCTNACTGTACGATCTTCA
rJMSF028G01- CAGTATCCCAAAGCTGCAGTCTTACTGTACGATCTTCAAGGTACATTGTCTTTGACAGGA
JMSF028G01+ CAGTATCCCAAAGCTGCAGTCTTACTGTACGATCTTCAAGGTACATTGTCTTTGACAGGA
JMFF027J24+ CTGTATCCCAAAGCTGCAATCTCACTGTACGATCTTCAAGGTACATTGTCTTTGACAGGA
JMFF001M18+ CTGTATCCCAAAGCTGCAATCTCACTGTACGATCTTCAAGGTACATTGTCTTTGACAGGA
____________________________________________________________
consensus CAGTATCCCAAAGCTGCAGTCTTACTGTACGATCTTCAAGGTACATTGTCTTTGACAGGA
. : . : . : . : . : . :
rJMSF028G01- AATCAATGCCAATTGTTGCCTGGTATGTGTTATCGAACTGGTCGTACATAAAGCGAG
JMSF028G01+ AATCAATGCCAATTGTTGCCTGGTATGTGTTATCGAACTTGTCGTACATAAAGCGAGTGA
JMFF027J24+ AATCAATACCAATAGTTGCCTGATAAGTGGTATCGAATTTATCGTACATGAAGCGAGTAA
JMFF001M18+ AATCAATACCAATAGTTGCCTGATAAGTGGTATCGAATTTATCGTACATGAAGCGAGTAA
____________________________________________________________
consensus AATCAATGCCAATTGTTGCCTGGTATGTGTTATCGAACTTGTCGTACATAAAGCGAGTAA
. : . : . : . : . : . :
JMSF028G01+ TGATACTGGTTTTGCCGACAGACTGGTCTCCTAAGAAGACGAGCTTGTACTTAGCGAGGG
JMFF027J24+ TGATACTGGTTTTCCCCACGGATTGATCTCCTAAGAATACGAGCTTGTACTTGGCAAGAG
JMFF001M18+ TGATACTGGTTTTCCCCACGGATTGATCTCCTAAGAATACGAGCTTGTACTTGGCAAGAG
____________________________________________________________
consensus TGATACTGGTTTTCCCCACGGATTGATCTCCTAAGAATACGAGCTTGTACTTGGCAAGAG
. : . : . : . : . : . :
JMSF028G01+ CGGAAACCGGAGCCATCAATCTGATC
JMFF027J24+ CCGAAACTGGAGCCATCTATCTGATCTACTCGTTTGACTTCTGGATTATGAAATCCGTGG
JMFF001M18+ CCGAAACTGGAGCCATCTATCTGATCTACTCGTTTGACTTCTGGATTATGAAATCCGTGG
____________________________________________________________
consensus CCGAAACTGGAGCCATCTATCTGATCTACTCGTTTGACTTCTGGATTATGAAATCCGTGG
. : . : . : . : . : . :
JMFF027J24+ ATCGGATCAGGACTTTTCCGACGGAGTATTTTATAAATCGCCGGAAAATGATCGGAGGCG
JMFF001M18+ ATCGGATCAGGACTTTTCCGACGGAGTATTTTATAAATCGCCGGAAAATGATCGGAGGCG
____________________________________________________________
consensus ATCGGATCAGGACTTTTCCGACGGAGTATTTTATAAATCGCCGGAAAATGATCGGAGGCG
. : . : . : . : . : . :
JMFF027J24+ CGTCGAAGACAGCAATGTGAGAGAGGGACGTGCGTTCTAGACTTCTAGGTATTTGTATTC
JMFF001M18+ CGTCGAAGACAGCAATGTGAGAGAGGGACGTGCGTTCTAGACTTCTAGGTATTTGTATTC
____________________________________________________________
consensus CGTCGAAGACAGCAATGTGAGAGAGGGACGTGCGTTCTAGACTTCTAGGTATTTGTATTC