| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMCP015A10 | Sequence | 574 | 001540 (13) | gb|KFL94796.1| | 6e-18 | putative YSIRK type signal peptide [Lactobacillus gasseri SJ-9E-US] | |||||
| JMCP015B09 | Sequence | 575 | 001540 (13) | gb|KFL94796.1| | 1e-18 | putative YSIRK type signal peptide [Lactobacillus gasseri SJ-9E-US] | |||||
| JMCP015E10 | Sequence | 569 | 001540 (13) | gb|KFL94796.1| | 5e-18 | putative YSIRK type signal peptide [Lactobacillus gasseri SJ-9E-US] | |||||
| JMCP015F08 | Sequence | 611 | 001540 (13) | gb|KFL94796.1| | 7e-18 | putative YSIRK type signal peptide [Lactobacillus gasseri SJ-9E-US] | |||||
| JMCP015G03 | Sequence | 604 | 001540 (13) | gb|KFL94796.1| | 7e-18 | putative YSIRK type signal peptide [Lactobacillus gasseri SJ-9E-US] | |||||
| JMCP015G08 | Sequence | 304 | 001540 (13) | gb|KFL94796.1| | 7e-06 | putative YSIRK type signal peptide [Lactobacillus gasseri SJ-9E-US] | |||||
| JMCP015H02 | Sequence | 614 | 001540 (13) | gb|KFL94796.1| | 7e-18 | putative YSIRK type signal peptide [Lactobacillus gasseri SJ-9E-US] | |||||
| JMCP016A01 | Sequence | 605 | 001540 (13) | gb|KFL94796.1| | 7e-18 | putative YSIRK type signal peptide [Lactobacillus gasseri SJ-9E-US] | |||||
| JMCP016C01 | Sequence | 612 | 001540 (13) | gb|KFL94796.1| | 7e-18 | putative YSIRK type signal peptide [Lactobacillus gasseri SJ-9E-US] | |||||
| JMCP016F09 | Sequence | 610 | 001540 (13) | gb|KFL94796.1| | 7e-18 | putative YSIRK type signal peptide [Lactobacillus gasseri SJ-9E-US] | |||||
| JMCP016G03 | Sequence | 383 | 001540 (13) | gb|KFL94796.1| | 1e-09 | putative YSIRK type signal peptide [Lactobacillus gasseri SJ-9E-US] | |||||
| JMCP016H06 | Sequence | 508 | 001540 (13) | gb|KFL94796.1| | 3e-18 | putative YSIRK type signal peptide [Lactobacillus gasseri SJ-9E-US] | |||||
| JMCP016H11 | Sequence | 607 | 001540 (13) | gb|KFL94796.1| | 7e-18 | putative YSIRK type signal peptide [Lactobacillus gasseri SJ-9E-US] | |||||
This contig is upended
. : . : . : . : . : . :
JMCP015H02+ TATATAATTCCATA
JMCP016C01+ TAATTCCATA
JMCP016F09+ TAATTCCATA
rJMCP016H11+ TTCCATA
rJMCP016A01+ CCATA
JMCP015G03+ CAat
rJMCP016H06+ TTCCATA
rJMCP015F08+ TAATTCCATA
____________________________________________________________
consensus TATATAATTCCATA
. : . : . : . : . : . :
JMCP015H02+ ATTATATCCTCGTGGATCTTGGATGGAGCAAGAGGAATAGAGATTGCTTTGGACAGCTTA
JMCP016C01+ ATTATATCCTCGTGGATCTTcGATGGAGCAAGAGGAATAGAGATTGCTTTGGACAGCTTA
JMCP016F09+ ATTATATCCTCGTGGATCTTGGATGGAGCAAGAGGAATAGAGATTGCTTTGGACAGCTTA
rJMCP016H11+ ATTATATCCTCGTGGATCTTGGATGGAGCAAGAGGAATAGAGATTGCTTTGGACAGCTTA
rJMCP016A01+ ATTATATCCTCGTGGATCTTcGATGGAGCAAGAGGAATAGAGATTGCTTTGGACAGgaTA
JMCP015G03+ taatTtaggTgcTGctTCaacctaGGAGCAAGAGGAATAGAGATTGCTTTGGACAGCTTA
rJMCP015A10+ AGCAAGAGGAATAGAGATTGCTaaGGACAGCTTA
rJMCP015E10+ GAGGAATAGActaacCTaaGctCAGCTTA
JMCP015B09+ GGAGCAAGAGGAATAGAGATTGCTaaGGACAGCTTA
rJMCP016H06+ ATTATATCCTCGTGGATCTTGGATGGAGCAAGAGGAATAGAGATTGCTTTGGACAGCTTA
rJMCP015F08+ ATTATATCCTCGTGGATgaacctaGGAGCAAGAGGAATAGAGATTGCTTTGGACAGCTTA
____________________________________________________________
consensus ATTATATCCTCGTGGATCTTGGATGGAGCAAGAGGAATAGAGATTGCTTTGGACAGCTTA
. : . : . : . : . : . :
JMCP015H02+ TTATTGAACACCGTTTCACCATGCCATAAACTTCACTGCTCCGGTGATCCGTTTAAAGGA
JMCP016C01+ TTATTGAACACCGTTTCACCATGCCATAAtgaTCACTcgaCCGGTGATCCGTTTAAAGGA
JMCP016F09+ TTATTGAACACCGTTTCACCATGCCATAAACTTCACTGCTCCGGTGATCCGTTTAAAGGA
rJMCP016H11+ TTATTGAACACCGTTTCACCATGCCATAAACTTCtCTGCTCCGGTGATCCGTTTAAAGGA
rJMCP016A01+ TTATTGAACACCGTTTCACCATGCCATAAtCTTCtgacgaCCGGTGATCCcTTTAAAGGA
JMCP015G03+ TTATTGAACACCGTTTCACCATGCCATAAACTTCACTGCTCCGGTGATCCGTTTAAAGGA
rJMCP015A10+ TTATTGAACACCGTTTCACCATGCCATAAACTTCACTGCTCCGGTGATCCGTTTAAAGGA
rJMCP015E10+ TTATTGAAgtggcaTTCACCAacCCATAAACTTCAgacgaCCGGTGATCCGTTTAAAGGA
JMCP015B09+ TTATTGAACACCGTTTCACCATGCCATAAACTTCACTGCTCCGGTGATCCGTTTAAAGGA
rJMCP016H06+ TTATTGAACACCGTTTCACCATGCCATAAACTTCACTGCTCCGGTGATCCGTTTAAAGGA
rJMCP015F08+ TTATTGAACACCGTTTCACCATGCCATAAACTTCACTGCTCCGGTGATCCGTTTAAAGGA
____________________________________________________________
consensus TTATTGAACACCGTTTCACCATGCCATAAACTTCACTGCTCCGGTGATCCGTTTAAAGGA
. : . : . : . : . : . :
JMCP015H02+ TGATTTGGCATCGTCGGCTCCGATAGCATTGCCGGAGAATCATACTTCAAAGGATGACTT
JMCP016C01+ TGATTTGGCAagcaCcGgaCCGATAGCATTGCCGGAGAATCATACTTCAAAGGATGACTT
JMCP016F09+ TGATTTGGCATCGTCGGCTCCGATAGCATTGCCGGAGAATCATACTTCAAAGGATGACTT
rJMCP016H11+ TGATTTGGCAagcagcGCTCCGATAGCATTGCCGGAGAATCATACTTCAAAGGATGACaT
rJMCP016A01+ TGATTTGGCAagcagccgaCCGATAGCATTGCCGGAGAATCATAgaTCAAAGGATGtCaT
JMCP015G03+ TGATTTGGCATCGTCGGCTCCGATAGCATTGCCGGAGAATCATACTTCAAAGGATGACTT
rJMCP015A10+ TGATTTGGCATgcaCGGCTCCGATAGCATTGCCGGAGAATCATACTTCAAAGGATGACTT
rJMCP015E10+ TGAaaacGCAagcaCGGCTCCGATAGCATTGCCGGAGAATCATACTTCAAAGGATGtgaa
JMCP015B09+ TGATaacGCAaCGaCcGCTCCGATAGCATTGCCGGAGAATCATACTTCAAAGGATGACTa
rJMCP016H06+ TGATTTGGCATCGTCGGCTCCGATAGCATTGCCGGAGAATCATACTTCAAAGGATGACTT
rJMCP015F08+ TGATTTGGCATgcagcGCTCCGATAGCATTGCCGGAGAATCATACTTCAAAGGATGACTT
____________________________________________________________
consensus TGATTTGGCATCGTCGGCTCCGATAGCATTGCCGGAGAATCATACTTCAAAGGATGACTT
. : . : . : . : . : . :
JMCP015H02+ GGCATCGTCGGCTCCGATAGCATTGCCGGAGAATCATACTTTAAAGGATGATTTGGCATC
JMCP016C01+ GGCAagcaCcGCTCCGATAGCATTGCCGGAGAATCATACTTTAAAGGATGATTTGGCATg
JMCP016F09+ GGCATgcTCGGCTCCGATAGCATTGCCGGAGAATCATACTTTAAAGGATGATTTGGCATC
rJMCP016H11+ cGCATgcaCcGCTCgcATAGCATTGCgcGAGAATCATACTTTAAAGGATGATTTGGCAag
rJMCP016A01+ GGCAagcaCccgagCGATAGCATTGCCGGAGAATCATACTTTAAAGGATGATTTGGCAag
JMCP015G03+ GGCATCGTCGGCTCCGATAGCATTGCCGGAGAATCATACTTTAAAGGATGATTTGGCATC
rJMCP015A10+ GGCATgcTCGGCTCCGATAGCATTGCCGGAGAATCATACTTTAAAGGATGATTTGGCATg
rJMCP015E10+ cGCAagcaCGGCTCCGATAGCATTGCCGGAGAATCATACTTTAAAGGATGATTTGGCATC
JMCP015B09+ cGCATCGTCGGCTCCGATAGCATTGCCGGAGAATCATACTTTAAAGGATGATTTGGCATC
rJMCP016H06+ GGCAagcTCGGCTCCGATAGCATTGCCGGAGAATCATACTTTAAAGGATGATTTGGCATC
rJMCP016G03+ ACTTTAttGctaGtaaaccgtaa
rJMCP015F08+ cGCATgcaCGGCTCCGATAGCATTGCCGGAGAATCATACTTTAAAGGATGATTTGGCATg
____________________________________________________________
consensus GGCATCGTCGGCTCCGATAGCATTGCCGGAGAATCATACTTTAAAGGATGATTTGGCATC
. : . : . : . : . : . :
JMCP015H02+ GTCGGCTCCGATAGCATTGCCGGAGAATCATACTTCAAATGATAATTTGGCATCGTCGGC
JMCP016C01+ cTCGGCTCCGATAGCATTGCCGGAGAATCATACTTCAAATGATAATTTGGCAaCcTCGGC
JMCP016F09+ GTCGGCTCCGATAGCATTGCCGGAGAATCATACTTCAAATGATAATTTGGCATCcTCGGC
rJMCP016H11+ cagcGCTCCGATAGCATTGggcGAGAATCATAgaTCAAATGATAtaaaccgtagcagccg
rJMCP016A01+ cagcGCTCCGATAGCATTGCCGGAGAATCATACTTCAAATGATAATaTGGCAaCcagcGC
JMCP015G03+ GTCGGCTCCGATAGCATTGCCGGAGAATCATACTTCAAATGATAATTTGGCATCGTCGGC
rJMCP015A10+ cTCGGCTCCGATAGCATTGCCGGAGAATCATACTTCAAATGATAATTTGGCATCGTCGGC
rJMCP015E10+ GTCGGCTCCGATAGCATTGCCGGAGAATCATACTTCAAATGATAATTTGGCATCGTCGGC
JMCP015B09+ GTCGGCTCCGATAGCATTGCCGGAGAATCATACTTCAAATGATAATTTGGCATCGTCGGC
rJMCP016H06+ GTCGGCTCCGATAGCATTGCCGGAGAATCATACTTCAAATGATAATTTGGCATCGTCGGC
rJMCP016G03+ cagccgaggctatcCAaacggcctctATCATtgaaCtttTGATAtaaaccgtagcagccg
JMCP015G08+ ATGAaAtaatccgtagcagcGg
rJMCP015F08+ cTCGGCTCCGATAGCATTGCCGGAGAATCATACTTCAAATGATAATTTGGCATCGTCGGC
____________________________________________________________
consensus GTCGGCTCCGATAGCATTGCCGGAGAATCATACTTCAAATGATAATTTGGCATCGTCGGC
. : . : . : . : . : . :
JMCP015H02+ TCCGATAGCATTGCAGGAGATTCATACTTTAAAGGATGATTTGGCATCGTCGGCTCCGAT
JMCP016C01+ TCCGATAGCATTGCAGGAGATTCATACTTTAAAGGATGATTTGGCAaCGTCGGCTCCGAT
JMCP016F09+ TCCGATAGCATTGCAGGAGATTCATACTTTAAAGGATGATTTGGCAaCGTCGGCTCCGAT
rJMCP016H11+ TCCctatGCATaGCAGGAGATTgtaACTTTAAAGGATGATaacGCAagcagcGgagCGAT
rJMCP016A01+ TCCGATAGCATTGCAGGAGATTCATACTTTAAAGGATGATTTGGCAaCcTCGGCTCCGAT
JMCP015G03+ TCCGATAGCATTGCAGGAGATTCATACTTTAAAGGATGATTTGGCATCGTCGGCTCCGAT
rJMCP015A10+ TCCGATAGCATTGCAGGAGATTCATACTTTAAAGGATGATTTGGCATCGTCGGCTCCGAT
rJMCP015E10+ TCCGATAGCATTGCAGGAGATTCATACTTTAAAGGATGATTTGGCATCGTCGGCTCCGAT
JMCP015B09+ TCCGATAGCATTGCAGGAGATTCATACTTTAAAGGATGATTTGGCATCGTCGGCTCCGAT
rJMCP016H06+ TCCGATAGCATTGCAGGAGATTCATACTTTAAAGGATGATTTGGCATCGTCGGCTCCGAT
rJMCP016G03+ aggGtatGCATTGCAcGAGATTgtaACTTTAAtccATGATaaccgtagcagcGCTggcAT
JMCP015G08+ aggctatcgtaacgtGGAcATTgtaACTTTAttGGATGATaacGCtagcagccgaggcta
rJMCP015F08+ TCCGATAGCATTGCAGGAGATTCATACTTTAAAGGATGATTTGGCATCGTCGGCTCCGAT
____________________________________________________________
consensus TCCGATAGCATTGCAGGAGATTCATACTTTAAAGGATGATTTGGCATCGTCGGCTCCGAT
. : . : . : . : . : . :
JMCP015H02+ AGCATTGCCGGAGAATCATACTTTAAAGGATGATTTGGCATCGTCGGCTCCGATAGCATT
JMCP016C01+ AGCATTGCCGGAGAATCATACTTTAAAGGATGATTTGGCATCGTCGGCTCCGATAGCATT
JMCP016F09+ AGCATTGCCGGAGAATCATACTTTAAAGGATGATTTGGCATCGTCGGCTCCGATAGCATT
rJMCP016H11+ tGCAaacCCGGAGAATCATACTTTAAAGGATGATaacGCATCGTgccCTCCGATAGCATa
rJMCP016A01+ AGCATTGCCGGAGAATCATACTTTAAAGGATGATTTGGCATCcTCGGCTCCGATAGCATT
JMCP015G03+ AGCATTGCCGGAGAATCATACTTTAAAGGATGATTTGGCATCGTCGGCTCCGATAGCATT
rJMCP015A10+ AGCATTGCCGGAGAATCATACTTTAAAGGATGATTTGGCATCGTCGGCTCCGATAGCATT
rJMCP015E10+ AGCATTGCCGGAGAATCATACTTTAAAGGATGATTTGGCATCGTCGGCTCCGATAGCATT
JMCP015B09+ AGCATTGCCGGAGAATCATACTTTAAAGGATGATTTGGCATCGTCGGCTCCGATAGCATT
rJMCP016H06+ AGCATTGCCGGAGAATCATACTTTAAAGGATGATTTGGCATCGTCGcgaggcATAGCATT
rJMCP016G03+ AGCATacggGGAGAATCATACTTTAAAGGATGATaaccgtagcTCGcCTCCGATAGCATT
JMCP015G08+ AGgtaacggGGAGAtagATACTTTAtAcctaGtaaacGCtagcagccgaggcATAGgtaT
rJMCP015F08+ AGCATTGCCGGAGAATCATACTTTAAAGGATGATTTGGCATCGTCGGCTCCGATAGCATT
____________________________________________________________
consensus AGCATTGCCGGAGAATCATACTTTAAAGGATGATTTGGCATCGTCGGCTCCGATAGCATT
. : . : . : . : . : . :
JMCP015H02+ GCAGGAGAATCATACTTTAAAGGATGATGATTTGGCATCATAGTAATTGGCCTCGCCATG
JMCP016C01+ GCAGGAGAATCATACTTTAAAGGATGATGATTTGGCATCATAGTAATTGGCCTCGCCATG
JMCP016F09+ GCAGGAGAATCATACTTTAAAGGATGATGATTTGGCATCATAGTAATTGGCCTCGCCATG
rJMCP016H11+ cCAGGAGAATCATACTTTAAAGGATGATGATTacGCATCATAGTAATTGGCCTCGCCATG
rJMCP016A01+ GCAGGAGAATCATACTTTAAAGGATGATGATTTGGCATCATAGTAATTGGCCTCGCCATG
JMCP015G03+ GCAGGAGAATCATACTTTAAAGGATGATGATTTGGCATCATAGTAATTGGCCTCGCCATG
rJMCP015A10+ GCAGGAGAATCATACTTTAAAGGATGATGATTTGGCATCATAGTAATTGGCCTCGCCATG
rJMCP015E10+ GCAGGAGAATCATACTTTAAAGGATGATGATTTGGCATCATAGTAATTGGCCTCGCCATG
JMCP015B09+ GCAGGAGAATCATACTTTAAAGGATGATGATTTGGCATCATAGTAATTGGCCTCGCCATG
rJMCP016H06+ GCAGGAGAATCATACTTTAAAGGATGATGATTTGGCATCATAGTAATTGGCCagcggtac
rJMCP016G03+ GCAGGAGAATCATACTTTAAAGGATGATGATTTccgATCATAGTAATTGGCCTCGggtac
JMCP015G08+ GCAGGAGAATCtatCTTTAAtccATGATGtaaacGgtagtatcatATTGGCCTCGggtac
rJMCP015F08+ GCAGGAGAATCATACTTTAAAGGATGATGATTTGGCATCATAGTAATTGGCCTCGCCATG
____________________________________________________________
consensus GCAGGAGAATCATACTTTAAAGGATGATGATTTGGCATCATAGTAATTGGCCTCGCCATG
. : . : . : . : . : . :
JMCP015H02+ CTTGAGTTAAGAAGAAGGTGAGAAATGAGCAGAAATGCTCCAATGGTAAGCCGTGAAGAA
JMCP016C01+ CTTGAGTTAAGAAGAAGGTGAGAAATGAGCAGAAATGCTCgttTGGTAAGCCGTGAAGAA
JMCP016F09+ CTTGAGTTAAGAAGAAGGTGAGAAATGAGCAGAAATGCTCCAATGGTAAGCCGTGAAGAA
rJMCP016H11+ CTaGAGTTAAGAAGAAGGTGAGAAATGAGCAGAAATGCaggAATGGTAAGCCGTGAAGAA
rJMCP016A01+ CTTGAGTTAAGAAGAAGGTGAGAAATGAGCAGAAATGCTCgttTGGTAAGCCGTGAAGAA
JMCP015G03+ CTTGAGTTAAGAAGAAGGTGAGAAATGAGCAGAAATGCTCCAATGGTAAGCCGTGAAGAA
rJMCP015A10+ CTTGAGTTAAGAAGAAGGTGAGAAATGAGCAGAAATGCTCCAATGGTAAGCCGTGAAGAA
rJMCP015E10+ CTTGAGTTAAGAAGAAGGTGAGAAATGAGCAGAAATGCTCCAATGGTAAGCCGTGAAGAA
JMCP015B09+ CTTGAGTTAAGAAGAAGGTGAGAAATGAGCAG-AATGCTCCAATGGTAAGCCGTGAAGAA
rJMCP016H06+ gaaGAGTTAAGAAGAAGGTGA
rJMCP016G03+ CaactcTTAAGAAGAAGGTGAGAAATGAGCAGAAATGCTCCAATGGTAAGCCGTGttcAA
JMCP015G08+ gaactGTTttcAAGAAGGTGAGAAATGAGCAGAAATcgTgCAtaccattGCCGaGtAGAA
rJMCP015F08+ CTTGAGTTAAGAAGAAGGTGAGAAATGAGCAGAAATGCTCCAATGGTAAGCCGTGAAGAA
____________________________________________________________
consensus CTTGAGTTAAGAAGAAGGTGAGAAATGAGCAGAAATGCTCCAATGGTAAGCCGTGAAGAA
. : . : . : . : . : . :
JMCP015H02+ GGAGAGGCCATGGCGGTGGGAATTCAATTGAAAGAGGGTTTTATAATATATTTTGAGGTC
JMCP016C01+ GGAGAGGCgtaGGCGGTGGGAATTgttTTGAAAGAGGGTTTTATAATATATTTTGAGGTC
JMCP016F09+ GGAGAGGCCATGGCGGTGGGAATTCttTTGAAAGAGGGTTTTATAATATATTTTGAGGTC
rJMCP016H11+ GGAGAGGCCtaGGCGGTGGGAATTgttTTGAAAGAGGGTTTTATAATATATTTaGAGGTC
rJMCP016A01+ GGAGAGGCgtaGGCGGTGGGAATTgttTTGAAAGAGGGTTTTATAATATATTTTGAGGTC
JMCP015G03+ GGAGAGGCCATGGCGGTGGGAATTCAATTGAAAGAGGGTTTTATAATATATTTTGAGGTC
rJMCP015A10+ GGAGAGGCCATGGCGGTGGGAATTCAATTGAAAGAGGGTTTTATAATATATTTTGAGGTC
rJMCP015E10+ GGAGAGGCCATGGCGGTGGGAATTCAATTGAAAGAGGGTTTTATAATATATTTTGAGGTC
JMCP015B09+ GGAGAGGCCATGGCGGTGGGAATTCAATTGAAAGAGGGTTTTATAATATATTTTGAGGTC
rJMCP016G03+ GGAGAGGCCtacGCGGTGGGAATTCAATTGAAAGAGGGTTTTATAATATATTTTGAGGTC
JMCP015G08+ GGAGAGGCCATGGCGGTGGGAATTCAATTGAAAGAGGGTTTT
rJMCP015F08+ GGAGAGGCCATGGCGGTGGGAATTCAATTGAAAGAGGGTTTTATAATATATTTTGAGGTC
____________________________________________________________
consensus GGAGAGGCCATGGCGGTGGGAATTCAATTGAAAGAGGGTTTTATAATATATTTTGAGGTC