Contig 001533:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMCP001H05+                                                           CACTTTGCACA
rJMCP003G03+                                                          GCACTTTGCACA
                      ____________________________________________________________
consensus                                                             GCACTTTGCACA
 
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rJMCP001H05+          GTGGGGCGTCAAGAAAGATATAAAACGCGATTTTCAACTCttggaggtggaagaggACTC
rJMCP003G03+          GTGGGGCGTCAAGAAAGATATAAAACGCGATTTTCAACTCAACCTCCACCTCCTCCACTC
                      ____________________________________________________________
consensus             GTGGGGCGTCAAGAAAGATATAAAACGCGATTTTCAACTCAACCTCCACCTTCTCCACTC
 
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rJMCP001H05+          TCCTCCATCTCTCTCTGCTCTGCGAACCCGAAGATATCTCGCAGAGATTTTGTACGCAAA
rJMCP003G03+          TCCTCCATCTCTCTCTGCTCTGCGAACCCGAAGATATCTCGCAGAGATTTTGTACGCAAA
                      ____________________________________________________________
consensus             TCCTCCATCTCTCTCTGCTCTGCGAACCCGAAGATATCTCGCAGAGATTTTGTACGCAAA
 
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rJMCP001H05+          AATACTCAGAGCTCCCTCTCACTATATCTAAAACCCTTGTGTTTTTACCGACCAATTTTC
rJMCP003G03+          AATACTCAGAGCTCCCTCTCACTATATCTAAAACCCTTGTGTTTTTACCGACCAATTTTC
                      ____________________________________________________________
consensus             AATACTCAGAGCTCCCTCTCACTATATCTAAAACCCTTGTGTTTTTACCGACCAATTTTC
 
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rJMCP001H05+          ATTTTGAATTTTTTTCGTTCGGCTTTGCGCAAGTATTTCTTCCCCTTCCATCTCCATTCT
rJMCP003G03+          ATTTTGAATTTTTTTCGTTCGGTTTTGCGCAAGTATTTCTTCCCCTTCCATCTCCATTCT
                      ____________________________________________________________
consensus             ATTTTGAATTTTTTTCGTTCGGTTTTGCGCAAGTATTTCTTCCCCTTCCATCTCCATTCT
 
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rJMCP001H05+          CACTTCGCTGGGAATTCCACTCAGGCAATTGAGCGGCGCCGaggaggaaggcggtGGTGC
rJMCP003G03+          CACTTCGCTGGGAATTCCACTCAGGCAATTGAGCGGCGCCGTCCTCC-TCCGCCAGGTGC
                      ____________________________________________________________
consensus             CACTTCGCTGGGAATTCCACTCAGGCAATTGAGCGGCGCCGTCCTCCTTCCGCCAGGTGC
 
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rJMCP001H05+          AAATTTCACTTTCCAATTTTGGGAGCGCATGAAAAATGCGTTTTTGTGTGTTTGCGTTGC
rJMCP003G03+          AAATTTCACTTTCCAATTTTGGGAGCGCATGAAAAATGCGTTTTTGTGTGTTTGCGTTGC
                      ____________________________________________________________
consensus             AAATTTCACTTTCCAATTTTGGGAGCGCATGAAAAATGCGTTTTTGTGTGTTTGCGTTGC