Contig 001531:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP002G05Sequence245001531 (2)
JMCP002H05Sequence245001531 (2)

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMCP002G05+                                                                 AGTCC
rJMCP002H05+                                                                 AGTCC
                      ____________________________________________________________
consensus                                                                    AGTCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMCP002G05+          TAACAAAAATGTATGTTTTGCATGAGGAAAAAACAGCCACATCAATAAAAAACAATGCTA
rJMCP002H05+          TAACAAAAATGTATGTTTTGCATGAGGAAAAAACAGCCACATCAATAAAAAACAATGCTA
                      ____________________________________________________________
consensus             TAACAAAAATGTATGTTTTGCATGAGGAAAAAACAGCCACATCAATAAAAAACAATGCTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMCP002G05+          AAATTTTTAAGTTGACAAAAACCAAGAAAAAACAATTCGCATGGTTGCTCTAAACAAACA
rJMCP002H05+          AAATTTTTAAGTTGACAAAAACCAAGAAAAAACAATTCGCATGGTTGCTCTAAACAAACA
                      ____________________________________________________________
consensus             AAATTTTTAAGTTGACAAAAACCAAGAAAAAACAATTCGCATGGTTGCTCTAAACAAACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMCP002G05+          AACAAAAAAGAATCTGACATTGACTGACAAAAACAACTAAAAGTCAAGAGTTGAAGTTTC
rJMCP002H05+          AACAAAAAAGAATCTGACATTGACTGACAAAAACAACTAAAAGTCAAGAGTTGAAGTTTC
                      ____________________________________________________________
consensus             AACAAAAAAGAATCTGACATTGACTGACAAAAACAACTAAAAGTCAAGAGTTGAAGTTTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMCP002G05+          TGAGCAGTTAAACCGCACATAGATAGCTAAACCGCAATGCTTCATGATCAGAGGCAGACA
rJMCP002H05+          TGAGCAGTTAAACCGCtgtatGATAGCTAAACCGCAATGCTTCATGATCAGAGGCAGACA
                      ____________________________________________________________
consensus             TGAGCAGTTAAACCGCACATAGATAGCTAAACCGCAATGCTTCATGATCAGAGGCAGACA