Contig 001500:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF005I04Sequence213002474 (3)261001500 (3)ref|XP_004251492.1|2e-05PREDICTED: vesicle-associated protein 4-1-like [Solanum lycopersicum]
JMSF050P23Sequence226002474 (3)692001500 (3)ref|XP_009616169.1|1e-104PREDICTED: vesicle-associated protein 4-1-like isoform X2 [Nicotiana tomentosif
JMSF052F21Sequence162002474 (3)846001500 (3)ref|XP_009616169.1|9e-114PREDICTED: vesicle-associated protein 4-1-like isoform X2 [Nicotiana tomentosif

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF052F21+ CTGGCAATCCGGAG
                      ____________________________________________________________
consensus CTGGCAATCCGGAG
 
. : . : . : . : . : . :
rJMSF052F21+ CTGCCACCAGCATCCACCAGAACGGCGTCGCGGGATCCGCCGCCTTCCCGCTCCACCGCC
                      ____________________________________________________________
consensus CTGCCACCAGCATCCACCAGAACGGCGTCGCGGGATCCGCCGCCTTCCCGCTCCACCGCC
 
. : . : . : . : . : . :
rJMSF052F21+ TCCGTCTCTTCCGTCGCCAGATCGTTCCTTCCGGCTCGCCGCCGCCTCCGCCTCGATCCG
                      ____________________________________________________________
consensus TCCGTCTCTTCCGTCGCCAGATCGTTCCTTCCGGCTCGCCGCCGCCTCCGCCTCGATCCG
 
. : . : . : . : . : . :
rJMSF052F21+ TCCAATAATCTCTATTTCCCTTATGAACCAGGGAAGCAGGTGAGGAGTGCGGTTAGGATT
rJMSF050P23+ CAGGGAAGCAGGTGAGGAGTGCNGTTAGGATT
                      ____________________________________________________________
consensus TCCAATAATCTCTATTTCCCTTATGAACCAGGGAAGCAGGTGAGGAGTGCGGTTAGGATT
 
. : . : . : . : . : . :
rJMSF052F21+ AAGAATACTAGCAAATCGCATGTCGCATTTAAGTTTCAAACGACTGCGCCAAAGAGCTGT
rJMSF050P23+ AAGAATACTAGCAAATCGCATGTCGCATTTAAGTTTCAAACGACTGCGCCAAAGAGCTGT
                      ____________________________________________________________
consensus AAGAATACTAGCAAATCGCATGTCGCATTTAAGTTTCAAACGACTGCGCCAAAGAGCTGT
 
. : . : . : . : . : . :
rJMSF052F21+ TACATGCGGCCTCCAGGTGGGATTCTTGAGCCCGGTGAAAGCATCATTGCTACGGTCTTC
rJMSF050P23+ TACATGCGGCCTCCAGGTGGGATTCTTGAGCCCGGTGAAAGCATCATTGCTACGGTCTTC
                      ____________________________________________________________
consensus TACATGCGGCCTCCAGGTGGGATTCTTGAGCCCGGTGAAAGCATCATTGCTACGGTCTTC
 
. : . : . : . : . : . :
rJMSF052F21+ AAATTTGTGGAGCAGCCGGAAAACAACGAAAAGTCCATGGATCAAAAGAGCAAGGTGAAG
rJMSF050P23+ AAATTTGTGGAGCAGCCGGAAAACAACGAAAAGTCCATGGATCAAAAGAGCAAGGTGAAG
                      ____________________________________________________________
consensus AAATTTGTGGAGCAGCCGGAAAACAACGAAAAGTCCATGGATCAAAAGAGCAAGGTGAAG
 
. : . : . : . : . : . :
rJMSF052F21+ TTTAAGATAATGAGCTTGAAGGTGAAAGAAGGAAGCGATTATGTACCTGAGATGTTTGAT
rJMSF050P23+ TTTAAGATAATGAGCTTGAAGGTGAAAGAAGGAAGCGATTATGTACCTGAGATGTTTGAT
                      ____________________________________________________________
consensus TTTAAGATAATGAGCTTGAAGGTGAAAGAAGGAAGCGATTATGTACCTGAGATGTTTGAT
 
. : . : . : . : . : . :
rJMSF052F21+ GAGCAAAAGGATCAAGCAACGGTAGAGAGAATCTTGCGTGTGGTGTTCCTGGATGCTGAG
rJMSF050P23+ GAGCAAAAGGATCAAGCAACGGTAGAGAGAATCTTGCGTGTGGTGTTCCTGGATGCTGAG
                      ____________________________________________________________
consensus GAGCAAAAGGATCAAGCAACGGTAGAGAGAATCTTGCGTGTGGTGTTCCTGGATGCTGAG
 
. : . : . : . : . : . :
rJMSF052F21+ CATACTTCTCCAGCAATGGAGAAACTAAAGCGTCAATTGGCCGAAGCTGATGCTGCAGTA
rJMSF050P23+ CATACTTCTCCAGCAATGGAGAAACTAAAGCGTCAATTGGCCGAAGCTGATGCTGCAGTA
                      ____________________________________________________________
consensus CATACTTCTCCAGCAATGGAGAAACTAAAGCGTCAATTGGCCGAAGCTGATGCTGCAGTA
 
. : . : . : . : . : . :
rJMSF052F21+ GAAGCTCGCAAGAAGCCTCCGGTTGATACAGGCCCGAAAGTCGTGGGTGAAGGTCTTGTA
rJMSF005I04+ GCAAGAAGCCTCCGGTTGATACAGGCCCGAAAGTCGNGGGTGAAGGTCTTGTA
rJMSF050P23+ GAAGCTCGCAAGAAGCCTCCGGTTGATACAGGCCCGAAAGTCGTGGGTGAAGGTCTTGTA
                      ____________________________________________________________
consensus GAAGCTCGCAAGAAGCCTCCGGTTGATACAGGCCCGAAAGTCGTGGGTGAAGGTCTTGTA
 
. : . : . : . : . : . :
rJMSF052F21+ ATCGATGAATGGAAGGAGCGGAGGGAAAAGTATCTCGCTAAGCAACAAGTTGAGGCGGTG
rJMSF005I04+ ATCGANGAANGGAAGGAGCGGAGGGAAAAGTATCTCNCTAAGCANCAAGTTGAGGCGGTG
rJMSF050P23+ ATCGATGAATGGAAGGAGCGGAGGGAAAAGTATCTCGCTAAGCAACAAGTTGAGGCGGTG
                      ____________________________________________________________
consensus ATCGATGAATGGAAGGAGCGGAGGGAAAAGTATCTCGCTAAGCAACAAGTTGAGGCGGTG
 
. : . : . : . : . : . :
rJMSF052F21+ GATTCGTCCTAGAGGGCTAATATATATTTTTTTCCAATGTAAGTGCCTCTTTGATTGAAA
rJMSF005I04+ GATTCNTCCTAGAGGGCTAATATATATTTTTTTCCAANGTAAGTGCCTCTTTGANTGAAA
rJMSF050P23+ GATTCGTCCTAGAGGGCTAATATATATTTTTTTCCAATGTAAGTGCCTCTTTGATTGAAA
                      ____________________________________________________________
consensus GATTCGTCCTAGAGGGCTAATATATATTTTTTTCCAATGTAAGTGCCTCTTTGATTGAAA
 
. : . : . : . : . : . :
rJMSF052F21+ AGGAAATACCGTACAAAATCCTACCCCCGTTTATACCCGGTTCGCCCCTTTTGAAGTCTC
rJMSF005I04+ AGGAAATNCCGTACAAAATCCTACCCCCGTTTATACCCGGTTCGCCCCTTTTGAAGTCTC
rJMSF050P23+ AGGAAATACCGTACAAAATCCTACCCCCGTTTATACCCGGTTCGCCCCTTTTGAAGTCTC
                      ____________________________________________________________
consensus AGGAAATACCGTACAAAATCCTACCCCCGTTTATACCCGGTTCGCCCCTTTTGAAGTCTC
 
. : . : . : . : . : . :
rJMSF052F21+ GAGTGGAGGATGGGCAGTGTTGTGCTCTNTAAAGAAGAATAATGTATGTGAG
rJMSF005I04+ GAGTGGAGGATGG
rJMSF050P23+ GAGTGGAGGATGGGCAGCGTTGTGCTCTGTAAAGAAGAATAATGTATGTGAGTGTTATTT
                      ____________________________________________________________
consensus GAGTGGAGGATGGGCAGTGTTGTGCTCTGTAAAGAAGAATAATGTATGTGAGTGTTATTT