Contig 001500: Sequence
BLAST Hits against nr-aa DB Show
Alignment
This contig is upended
. : . : . : . : . : . :
rJMSF052F21+ CTGGCAATCCGGAG
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consensus CTGGCAATCCGGAG
. : . : . : . : . : . :
rJMSF052F21+ CTGCCACCAGCATCCACCAGAACGGCGTCGCGGGATCCGCCGCCTTCCCGCTCCACCGCC
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consensus CTGCCACCAGCATCCACCAGAACGGCGTCGCGGGATCCGCCGCCTTCCCGCTCCACCGCC
. : . : . : . : . : . :
rJMSF052F21+ TCCGTCTCTTCCGTCGCCAGATCGTTCCTTCCGGCTCGCCGCCGCCTCCGCCTCGATCCG
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consensus TCCGTCTCTTCCGTCGCCAGATCGTTCCTTCCGGCTCGCCGCCGCCTCCGCCTCGATCCG
. : . : . : . : . : . :
rJMSF052F21+ TCCAATAATCTCTATTTCCCTTATGAACCAGGGAAGCAGGTGAGGAGTGCGGTTAGGATT
rJMSF050P23+ CAGGGAAGCAGGTGAGGAGTGCNGTTAGGATT
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consensus TCCAATAATCTCTATTTCCCTTATGAACCAGGGAAGCAGGTGAGGAGTGCGGTTAGGATT
. : . : . : . : . : . :
rJMSF052F21+ AAGAATACTAGCAAATCGCATGTCGCATTTAAGTTTCAAACGACTGCGCCAAAGAGCTGT
rJMSF050P23+ AAGAATACTAGCAAATCGCATGTCGCATTTAAGTTTCAAACGACTGCGCCAAAGAGCTGT
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consensus AAGAATACTAGCAAATCGCATGTCGCATTTAAGTTTCAAACGACTGCGCCAAAGAGCTGT
. : . : . : . : . : . :
rJMSF052F21+ TACATGCGGCCTCCAGGTGGGATTCTTGAGCCCGGTGAAAGCATCATTGCTACGGTCTTC
rJMSF050P23+ TACATGCGGCCTCCAGGTGGGATTCTTGAGCCCGGTGAAAGCATCATTGCTACGGTCTTC
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consensus TACATGCGGCCTCCAGGTGGGATTCTTGAGCCCGGTGAAAGCATCATTGCTACGGTCTTC
. : . : . : . : . : . :
rJMSF052F21+ AAATTTGTGGAGCAGCCGGAAAACAACGAAAAGTCCATGGATCAAAAGAGCAAGGTGAAG
rJMSF050P23+ AAATTTGTGGAGCAGCCGGAAAACAACGAAAAGTCCATGGATCAAAAGAGCAAGGTGAAG
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consensus AAATTTGTGGAGCAGCCGGAAAACAACGAAAAGTCCATGGATCAAAAGAGCAAGGTGAAG
. : . : . : . : . : . :
rJMSF052F21+ TTTAAGATAATGAGCTTGAAGGTGAAAGAAGGAAGCGATTATGTACCTGAGATGTTTGAT
rJMSF050P23+ TTTAAGATAATGAGCTTGAAGGTGAAAGAAGGAAGCGATTATGTACCTGAGATGTTTGAT
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consensus TTTAAGATAATGAGCTTGAAGGTGAAAGAAGGAAGCGATTATGTACCTGAGATGTTTGAT
. : . : . : . : . : . :
rJMSF052F21+ GAGCAAAAGGATCAAGCAACGGTAGAGAGAATCTTGCGTGTGGTGTTCCTGGATGCTGAG
rJMSF050P23+ GAGCAAAAGGATCAAGCAACGGTAGAGAGAATCTTGCGTGTGGTGTTCCTGGATGCTGAG
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consensus GAGCAAAAGGATCAAGCAACGGTAGAGAGAATCTTGCGTGTGGTGTTCCTGGATGCTGAG
. : . : . : . : . : . :
rJMSF052F21+ CATACTTCTCCAGCAATGGAGAAACTAAAGCGTCAATTGGCCGAAGCTGATGCTGCAGTA
rJMSF050P23+ CATACTTCTCCAGCAATGGAGAAACTAAAGCGTCAATTGGCCGAAGCTGATGCTGCAGTA
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consensus CATACTTCTCCAGCAATGGAGAAACTAAAGCGTCAATTGGCCGAAGCTGATGCTGCAGTA
. : . : . : . : . : . :
rJMSF052F21+ GAAGCTCGCAAGAAGCCTCCGGTTGATACAGGCCCGAAAGTCGTGGGTGAAGGTCTTGTA
rJMSF005I04+ GCAAGAAGCCTCCGGTTGATACAGGCCCGAAAGTCGNGGGTGAAGGTCTTGTA
rJMSF050P23+ GAAGCTCGCAAGAAGCCTCCGGTTGATACAGGCCCGAAAGTCGTGGGTGAAGGTCTTGTA
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consensus GAAGCTCGCAAGAAGCCTCCGGTTGATACAGGCCCGAAAGTCGTGGGTGAAGGTCTTGTA
. : . : . : . : . : . :
rJMSF052F21+ ATCGATGAATGGAAGGAGCGGAGGGAAAAGTATCTCGCTAAGCAACAAGTTGAGGCGGTG
rJMSF005I04+ ATCGANGAANGGAAGGAGCGGAGGGAAAAGTATCTCNCTAAGCANCAAGTTGAGGCGGTG
rJMSF050P23+ ATCGATGAATGGAAGGAGCGGAGGGAAAAGTATCTCGCTAAGCAACAAGTTGAGGCGGTG
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consensus ATCGATGAATGGAAGGAGCGGAGGGAAAAGTATCTCGCTAAGCAACAAGTTGAGGCGGTG
. : . : . : . : . : . :
rJMSF052F21+ GATTCGTCCTAGAGGGCTAATATATATTTTTTTCCAATGTAAGTGCCTCTTTGATTGAAA
rJMSF005I04+ GATTCNTCCTAGAGGGCTAATATATATTTTTTTCCAANGTAAGTGCCTCTTTGANTGAAA
rJMSF050P23+ GATTCGTCCTAGAGGGCTAATATATATTTTTTTCCAATGTAAGTGCCTCTTTGATTGAAA
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consensus GATTCGTCCTAGAGGGCTAATATATATTTTTTTCCAATGTAAGTGCCTCTTTGATTGAAA
. : . : . : . : . : . :
rJMSF052F21+ AGGAAATACCGTACAAAATCCTACCCCCGTTTATACCCGGTTCGCCCCTTTTGAAGTCTC
rJMSF005I04+ AGGAAATNCCGTACAAAATCCTACCCCCGTTTATACCCGGTTCGCCCCTTTTGAAGTCTC
rJMSF050P23+ AGGAAATACCGTACAAAATCCTACCCCCGTTTATACCCGGTTCGCCCCTTTTGAAGTCTC
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consensus AGGAAATACCGTACAAAATCCTACCCCCGTTTATACCCGGTTCGCCCCTTTTGAAGTCTC
. : . : . : . : . : . :
rJMSF052F21+ GAGTGGAGGATGGGCAGTGTTGTGCTCTNTAAAGAAGAATAATGTATGTGAG
rJMSF005I04+ GAGTGGAGGATGG
rJMSF050P23+ GAGTGGAGGATGGGCAGCGTTGTGCTCTGTAAAGAAGAATAATGTATGTGAGTGTTATTT
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consensus GAGTGGAGGATGGGCAGTGTTGTGCTCTGTAAAGAAGAATAATGTATGTGAGTGTTATTT