Contig 001482:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF047I07-                                                AAATGCAATGATAATAATATTT
                      ____________________________________________________________
consensus                                                   AAATGCAATGATAATAATATTT
 
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JMSF047I07+                                        TCCTGAAGCCTTTTGCAATCAAGAAGATAGG
rJMSF047I07-          ACTCCTCCAGCTGAGGCTTTGAAAATGCATCCTGAAGCCTTTTGCAATCAAGAAGATAGG
                      ____________________________________________________________
consensus             ACTCCTCCAGCTGAGGCTTTGAAAATGCATCCTGAAGCCTTTTGCAATCAAGAAGATAGG
 
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JMSF047I07+           CAAAACCGTACGCCATGTTCTTCAAGGTTGCGTCGTGCAGTTCTGCGGAGGAGGTGGCGG
rJMSF047I07-          CAAAACCGTACGCCATGTTCTTCAAGGTTGCGTCGTGCAGTTCTGCGGAGGAGGTGGCGG
                      ____________________________________________________________
consensus             CAAAACCGTACGCCATGTTCTTCAAGGTTGCGTCGTGCAGTTCTGCGGAGGAGGTGGCGG
 
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JMSF047I07+           TGGCGTCGGTGGAGAAGAAAACCCTAAACCCCCTAACAAAGGCCTCTCTTGCGGTGGTCT
rJMSF047I07-          TGGCGTCGGTGGAGAAGAAAACCCTAAACCCCCTAACAAAGGCCTCTCTTGCGGTGGTCT
                      ____________________________________________________________
consensus             TGGCGTCGGTGGAGAAGAAAACCCTAAACCCCCTAACAAAGGCCTCTCTTGCGGTGGTCT
 
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JMSF047I07+           CGCAGCACAAGTTGGTCATCACCCCCGTCACAATCACCTCTTTTGCACCCATCTCACTCA
rJMSF047I07-          CGCAGCACAAGTTGGTCATCACCCCCGTCACAATCACCTCTTTTGCACCCATCTCACTCA
                      ____________________________________________________________
consensus             CGCAGCACAAGTTGGTCATCACCCCCGTCACAATCACCTCTTTTGCACCCATCTCACTCA
 
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JMSF047I07+           GACTCTGCTCTAAGTTTGTGCCTGCGAAGGCGCTGTAAGTAGTCTTTTCAACCACCAAAT
rJMSF047I07-          GACTCTGCTCTAAGTTTGTGCCTGCGAAGGCGCTGTAAGTAGTCTTTTCAACCACCAAAT
                      ____________________________________________________________
consensus             GACTCTGCTCTAAGTTTGTGCCTGCGAAGGCGCTGTAAGTAGTCTTTTCAACCACCAAAT
 
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JMSF047I07+           CGGAATCCGTCCGGCCCAGCTGGGGGATGAGCTCCGCCTCAACGGTGCCGTCCATGATGA
rJMSF047I07-          CGGAATCCGTCCGGCCCAGCTGGGGGATGAGCTCCGCCTCAACGGTGCCGTCCATGATGA
                      ____________________________________________________________
consensus             CGGAATCCGTCCGGCCCAGCTGGGGGATGAGCTCCGCCTCAACGGTGCCGTCCATGATGA
 
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JMSF047I07+           GGTCGCCGTCCCACCACTCGTACAGCATGCCGTAGTCATCCGGAGACTTGTGGCGGTGGC
rJMSF047I07-          GGTCGCCGTCCCACCACTCGTACAGCATGCCGTAGTCATCCGGAGACTTGTGGCGGTGGC
                      ____________________________________________________________
consensus             GGTCGCCGTCCCACCACTCGTACAGCATGCCGTAGTCATCCGGAGACTTGTGGCGGTGGC
 
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JMSF047I07+           GCGTGAATATCACGCGCATCGACTGTCCGCGGCAGAGGTCGATGGTGGCCTTGATCGCCG
rJMSF047I07-          GCGTGAATATCACGCGCATCGACTGTCCGCGGCAGAGGTCGATGGTGGCCTTGATCGCCG
                      ____________________________________________________________
consensus             GCGTGAATATCACGCGCATCGACTGTCCGCGGCAGAGGTCGATGGTGGCCTTGATCGCCG
 
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JMSF047I07+           GCAGAATAGGCTTGGCCATGGAGTAGAAGTAGTTCTGCATGTCGATCACCAACAGGACGG
rJMSF047I07-          GCAGAATAGGCTTGGCCATGGAGTAGAAGTAGTTCTGCATGTCGATCACCAACAGGACGG
                      ____________________________________________________________
consensus             GCAGAATAGGCTTGGCCATGGAGTAGAAGTAGTTCTGCATGTCGATCACCAACAGGACGG
 
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JMSF047I07+           CGGATTTGGGGTCTGGATCTCGCTTCCTGACGTCATATTTCTGGTAAGATGACATTTTGG
rJMSF047I07-          CGGATTTGGGGTCTGGATCTCGCTTCCTGACGTCATATTTCTGGTAAGATGACATTTTGG
                      ____________________________________________________________
consensus             CGGATTTGGGGTCTGGATCTCGCTTCCTGACGTCATATTTCTGGTAAGATGACATTTTGG
 
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JMSF047I07+           TTTTGTGAGGTCCAGAGATATCTCTCTAGATTTTTCAGAGAAGTCTTCTAGCAGCACCCC
rJMSF047I07-          TTTTGTGAGGTCCAGAGATATCTCTCTAGATTTTTCAGAGAAGTCTTCTAGCAGCACCCC
                      ____________________________________________________________
consensus             TTTTGTGAGGTCCAGAGATATCTCTCTAGATTTTTCAGAGAAGTCTTCTAGCAGCACCCC