Contig 001481:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF022G16Sequence494012002 (2)ref|XP_004235290.1|5e-26PREDICTED: cell division cycle 20.2, cofactor of APC complex [Solanum lycopersi729001481 (2)ref|XP_006347559.1|5e-115PREDICTED: cell division cycle 20.1, cofactor of APC complex-like [Solanum tube
JMSF046M20Sequence632012002 (2)ref|XP_011075818.1|7e-41PREDICTED: cell division cycle 20.2, cofactor of APC complex-like [Sesamum indi747001481 (2)ref|XP_009626994.1|4e-114PREDICTED: cell division cycle 20.2, cofactor of APC complex-like [Nicotiana to

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF022G16+ CCAGCAGTTGGCTAGTGGAGG
rJMSF046M20+ CTCTGGNCCAGCAGTTGGCTAGTGGAGG
                      ____________________________________________________________
consensus CTCTGGNCCAGCAGTTGGCTAGTGGAGG
 
. : . : . : . : . : . :
rJMSF022G16+ GAATGATAATCTCCTCCACATATGGGACAGATCTACAGCTTCTTCCAACTCCTCAACACA
rJMSF046M20+ GAATGATAATCTCCTCCACATATGGGACAGATCTACAGCTTCTTCCAACTCCTCAACACA
                      ____________________________________________________________
consensus GAATGATAATCTCCTCCACATATGGGACAGATCTACAGCTTCTTCCAACTCCTCAACACA
 
. : . : . : . : . : . :
rJMSF022G16+ GTGGCTTCACAGGCTTGAGGATCACACAGCTGCTGTTAAGGCGCTTGCTTGGTGTCCATT
rJMSF046M20+ GTGGCTTCACAGGCTTGAGGATCACACAGCTGCTGTTAAGGCGCTTGCTTGGTGTCCATT
                      ____________________________________________________________
consensus GTGGCTTCACAGGCTTGAGGATCACACAGCTGCTGTTAAGGCGCTTGCTTGGTGTCCATT
 
. : . : . : . : . : . :
rJMSF022G16+ TCAGGGTAACTTGCTGGCCTCCGGTGGAGGTGGAGGCGACAGGTGCATAAAGTTCTGGAA
rJMSF046M20+ TCAGGGTAACTTGCTGGCCTCCGGTGGAGGTGGAGGCGACAGGTGCATAAAGTTCTGGAA
                      ____________________________________________________________
consensus TCAGGGTAACTTGCTGGCCTCCGGTGGAGGTGGAGGCGACAGGTGCATAAAGTTCTGGAA
 
. : . : . : . : . : . :
rJMSF022G16+ TACCCATACTGGCGCTTGTGTGAATTCAGTTGACACAGGATCACAGGTCTGTGCACTGCT
rJMSF046M20+ TACCCATACTGGCGCTTGTGTGAATTCAGTTGACACAGGATCACAGGTCTGTGCACTGCT
                      ____________________________________________________________
consensus TACCCATACTGGCGCTTGTGTGAATTCAGTTGACACAGGATCACAGGTCTGTGCACTGCT
 
. : . : . : . : . : . :
rJMSF022G16+ CTGGAACAAGAATGAGCGTGAACTGCTAAGCTCACATGGATTTACTCAGAACCAGCTTAC
rJMSF046M20+ CTGGAACAAGAATGAGCGTGAACTGCTAAGCTCACATGGATTTACTCAGAACCAGCTTAC
                      ____________________________________________________________
consensus CTGGAACAAGAATGAGCGTGAACTGCTAAGCTCACATGGATTTACTCAGAACCAGCTTAC
 
. : . : . : . : . : . :
rJMSF022G16+ CCTCTGGAAATACCCATCAATGGTAAAGATGGCAGAGCTTACGGGACATACATCCCGAGT
rJMSF046M20+ CCTCTGGAAATACCCATCAATGGTAAAGATGGCAGAGCTTACGGGACATACATCCCGAGT
                      ____________________________________________________________
consensus CCTCTGGAAATACCCATCAATGGTAAAGATGGCAGAGCTTACGGGACATACATCCCGAGT
 
. : . : . : . : . : . :
rJMSF022G16+ TCTTTTCATGGCTCAGAGTCCAGATGGTTGCACAGTTGCTTCTGCAGCAGGAGATGAAAC
rJMSF046M20+ TCTTTTCATGGCTCAGAGTCCAGATGGTTGCACAGTTGCTTCTGCAGCAGGAGATGAAAC
                      ____________________________________________________________
consensus TCTTTTCATGGCTCAGAGTCCAGATGGTTGCACAGTTGCTTCTGCAGCAGGAGATGAAAC
 
. : . : . : . : . : . :
rJMSF022G16+ ACTGAGATTCTGGAATGCTTTTGGAACCCCTGAAGTAGCAAAACAGGCACCAAAATCAAA
rJMSF046M20+ ACTGAGATTCTGGAATGCTTTTGGAACCCCTGAAGTAGCAAAACAGGCACCAAAATCAAA
                      ____________________________________________________________
consensus ACTGAGATTCTGGAATGCTTTTGGAACCCCTGAAGTAGCAAAACAGGCACCAAAATCAAA
 
. : . : . : . : . : . :
rJMSF022G16+ TCCAGAGCCCTTCGCTCATGTCAACCGAATTCGCTGAACAACCACCCACCCCACCCTCTG
rJMSF046M20+ TCCAGAGCCCTTCGCTCATGTCAACCGAATTCGCTGAACAACCACCCACCCCACCCTCTG
                      ____________________________________________________________
consensus TCCAGAGCCCTTCGCTCATGTCAACCGAATTCGCTGAACAACCACCCACCCCACCCTCTG
 
. : . : . : . : . : . :
rJMSF022G16+ CCCTGAGATATCTCCTTTGCACAAAAAATTTATTTGAGTTCCCTTTTTGTTTTTGGGAAC
rJMSF046M20+ CCCTGAGATATCTCCTTTGCACAAAAAATTTATTTGAGTTCCCTTTTTGTTTTTGGGAAC
                      ____________________________________________________________
consensus CCCTGAGATATCTCCTTTGCACAAAAAATTTATTTGAGTTCCCTTTTTGTTTTTGGGAAC
 
. : . : . : . : . : . :
rJMSF022G16+ AAACAAGAAAATCTGTTGTTTGAAATGTATCTAATAACTTGTATTTTTGCCTCTTTTTTT
rJMSF046M20+ AAACAAGAAAATCTGTTGTTTGAAATGTATCTAATAACTTGTATTTTTGCCTC-TTTTTT
                      ____________________________________________________________
consensus AAACAAGAAAATCTGTTGTTTGAAATGTATCTAATAACTTGTATTTTTGCCTCTTTTTTT
 
. : . : . : . : . : . :
rJMSF022G16+ TGGGTACTTTGTTTCATCTGTTGGTCACCTATTGTGACAAATCAC
rJMSF046M20+ TGGGTACTTTGTTTCATCTGTTGGTCACCTATTGTGACAAATCACCAAAGAATCAGCATA
                      ____________________________________________________________
consensus TGGGTACTTTGTTTCATCTGTTGGTCACCTATTGTGACAAATCACCAAAGAATCAGCATA