Contig 001468:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF026H04Sequence520008043 (5)745001468 (3)ref|XP_009615190.1|2e-71PREDICTED: ankyrin repeat protein SKIP35 [Nicotiana tomentosiformis] ref|XP_0096
JMSF040K11Sequence398008043 (5)864001468 (3)ref|XP_009615190.1|1e-108PREDICTED: ankyrin repeat protein SKIP35 [Nicotiana tomentosiformis] ref|XP_0096
JMSF044L18Sequence745008043 (5)739001468 (3)ref|XP_009760838.1|7e-29PREDICTED: ankyrin repeat protein SKIP35-like [Nicotiana sylvestris] ref|XP_0097

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF040K11+ CTCACAGCCGCA
                      ____________________________________________________________
consensus CTCACAGCCGCA
 
. : . : . : . : . : . :
rJMSF040K11+ ACATCCAGCAGTCAGGTCGAAGTGGCTGCATATCTTCTCCCTCATGTACCTCAGCCAGTT
                      ____________________________________________________________
consensus ACATCCAGCAGTCAGGTCGAAGTGGCTGCATATCTTCTCCCTCATGTACCTCAGCCAGTT
 
. : . : . : . : . : . :
rJMSF040K11+ CTTGCTGCTCTTAGTATTGAGATTCTCAAGGCAGCTGGTGAACGGAGTGGTGGATCTCTT
                      ____________________________________________________________
consensus CTTGCTGCTCTTAGTATTGAGATTCTCAAGGCAGCTGGTGAACGGAGTGGTGGATCTCTT
 
. : . : . : . : . : . :
rJMSF040K11+ GATGGTGTAGCTTTTCTTCTTCACTCAGACTTCCTTGGTGATCCTGTGGCTACTTATGCT
rJMFF026H04+ TGGTGATCCTGTGGCTACTTATGCT
                      ____________________________________________________________
consensus GATGGTGTAGCTTTTCTTCTTCACTCAGACTTCCTTGGTGATCCTGTGGCTACTTATGCT
 
. : . : . : . : . : . :
rJMSF040K11+ GTCGCAGACAGCATAGCTAGGTCTGATGATGAGGCCGTCACTCCTGAGCTCAGGGCTTTT
rJMFF026H04+ GTCGCAGACAGCATAGCTAGGTCTGATGATGAGGCCGTCACTCCTGAGCTCAGGGCTTTT
                      ____________________________________________________________
consensus GTCGCAGACAGCATAGCTAGGTCTGATGATGAGGCCGTCACTCCTGAGCTCAGGGCTTTT
 
. : . : . : . : . : . :
rJMSF040K11+ CTTCAGGAGCACTGGTCGGAGGCAGCCTTTTTAGATGGACTGGAGCAGGGACAAGAACAT
rJMFF026H04+ CTTCAGGAGCACTGGTCGGAGGCAGCCTTTTTAGATGGACTGGAGCAGGGACAAGAACAT
                      ____________________________________________________________
consensus CTTCAGGAGCACTGGTCGGAGGCAGCCTTTTTAGATGGACTGGAGCAGGGACAAGAACAT
 
. : . : . : . : . : . :
rJMSF040K11+ TACTTGAACATGGTGCGAATTATGAAATGGGGTGAATCTCCAATCCGTTTGTCGGATCTT
rJMFF026H04+ TACTTGAACATGGTGCGAATTATGAAATGGGGTGAATCTCCAATCCGTTTGTCGGATCTT
rJMSF044L18+ AATCCGTTTGTCGGATCTT
                      ____________________________________________________________
consensus TACTTGAACATGGTGCGAATTATGAAATGGGGTGAATCTCCAATCCGTTTGTCGGATCTT
 
. : . : . : . : . : . :
rJMSF040K11+ CCAGCTCCCCTGAGGGTTGCGATAGCATACCTGCCACTGTATAGGGAATGTATCAAGGTG
rJMFF026H04+ CCAGCTCCCCTGAGGGTTGCGATAGCATACCTGCCACTGTATAGGGAATGTATCAAGGTG
rJMSF044L18+ CCAGCTCCCNTGAGGGTTGCGATAGCATACCTGCCACTGTATAGGGAATGTATCAAGGTG
                      ____________________________________________________________
consensus CCAGCTCCCCTGAGGGTTGCGATAGCATACCTGCCACTGTATAGGGAATGTATCAAGGTG
 
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rJMSF040K11+ GGAGGTTGCTTGCTATCACAAAGGCACAGGGGACAGCTAGTGGGAGCTGCAAAAAGACTC
rJMFF026H04+ GGAGGTTGCTTGCTATCACAAAGGCACAGGGGACAGCTAGTGGGAGCTGCAAAAAGACTC
rJMSF044L18+ GGAGGTTGCTTGCTATCACAAAGGCACAGGGGACAGCTAGTGGGAGCTGCAAAAAGACTC
                      ____________________________________________________________
consensus GGAGGTTGCTTGCTATCACAAAGGCACAGGGGACAGCTAGTGGGAGCTGCAAAAAGACTC
 
. : . : . : . : . : . :
rJMSF040K11+ AGTGGTGTCATGCTCATCGAGGCAAACCATGGAAGAGAGTTACTGGCTGTCTTGGAGCAT
rJMFF026H04+ AGTGGTGTCATGCTCATCGAGGCAAACCATGGAAGAGAGTTACTGGCTGTCTTGGAGCAT
rJMSF044L18+ AGTGGTGTCATGCTCATCGAGGCAAACCATGGAAGAGAGTTACTGGCTGTCTTGGAGCAT
                      ____________________________________________________________
consensus AGTGGTGTCATGCTCATCGAGGCAAACCATGGAAGAGAGTTACTGGCTGTCTTGGAGCAT
 
. : . : . : . : . : . :
rJMSF040K11+ CATCTTCCTCCATTTTTGTTATATGCATCAAGCTTTGGGTAGAAAGATAGTAGTACTTGC
rJMFF026H04+ CATCTTCCTCCATTTTTGTTATATGCATCAAGCTTTGGGTAGAAAGATAGTAGTACTTGC
rJMSF044L18+ CATCTTCCTCCATTTTTGTTATATGCATCAAGCTTTGGGTAGAAAGATAGTAGTACTTGC
                      ____________________________________________________________
consensus CATCTTCCTCCATTTTTGTTATATGCATCAAGCTTTGGGTAGAAAGATAGTAGTACTTGC
 
. : . : . : . : . : . :
rJMSF040K11+ AAGAGTTCAAGTTTATGATCGAATCGAAGCATAATAATACAGTAGCTGGGGGCGACTTTG
rJMFF026H04+ AAGAGTTCAAGTTTATGATCGAATCGAAGCATAATAATACAGTAGCTGGGGGCGACTTTG
rJMSF044L18+ AAGAGTTCAAGTTTATGATCGAATCGAAGCATAATAATACAGTAGCTGGGGGCGACTTTG
                      ____________________________________________________________
consensus AAGAGTTCAAGTTTATGATCGAATCGAAGCATAATAATACAGTAGCTGGGGGCGACTTTG
 
. : . : . : . : . : . :
rJMSF040K11+ ATGAATCCTCAATATCTGTCAATTTTCTCACAACATAGTCGGGTTGGGTAACTTGTTTTT
rJMFF026H04+ ATGAATCCTCAATATCTGTCAATTTTCTCACAACATAGTCGGGTTGGGTAACTTGTTTTT
rJMSF044L18+ ATGAATCCTCAATATCTGTCAATTTTCTCACAACATAGTCGGGTTGGGTAACTTGTTTTT
                      ____________________________________________________________
consensus ATGAATCCTCAATATCTGTCAATTTTCTCACAACATAGTCGGGTTGGGTAACTTGTTTTT
 
. : . : . : . : . : . :
rJMSF040K11+ TGGTTTAACGAAACTGAGGTGAGGTTTAGTGCATACCTTGCTGTGCACAGCACCTCTAAA
rJMFF026H04+ TGGTTTAACGAAACTGAGGTGAGGTTTAGTGCATACCTTGCTGTGCACAGCACCTCTAAA
rJMSF044L18+ TGGTTTAACGAAACTGAGGTGAGGTTTAGTGCATACCTTGCTGTGCACAGCACCTCTAAA
                      ____________________________________________________________
consensus TGGTTTAACGAAACTGAGGTGAGGTTTAGTGCATACCTTGCTGTGCACAGCACCTCTAAA
 
. : . : . : . : . : . :
rJMSF040K11+ CTATCCAAGAAAGAAGAATACTAGAGTCAGGAGAAGTTGATACTGCAACCCATCATGTAA
rJMFF026H04+ CTATCCAAGAAAGAAGAATACTAGAGTCAGGAGAAGTTGATACTGCAACCCATCATGTAA
rJMSF044L18+ CTATCCAAGAAAGAAGAATACTAGAGTCAGGAGAAGTTGATACTGCAACCCATCATGTAA
                      ____________________________________________________________
consensus CTATCCAAGAAAGAAGAATACTAGAGTCAGGAGAAGTTGATACTGCAACCCATCATGTAA
 
. : . : . : . : . : . :
rJMSF040K11+ AATAGGTACTTT
rJMFF026H04+ AATAGGTACTTTTGTGGCAGTTATTTTCCTATTGATGATGATGCTGGTATACTGAAAAGT
rJMSF044L18+ AATAGGTACTTTTGTGGCAGTTATTTTCCTATTGATGATGATGCTGGTATACTGAAAAGT
                      ____________________________________________________________
consensus AATAGGTACTTTTGTGGCAGTTATTTTCCTATTGATGATGATGCTGGTATACTGAAAAGT
 
. : . : . : . : . : . :
rJMSF044L18+ GCTATTATCTTCCCCTGAATCATTGTGTGTATATATTATCAATCCTCATCCTATTTTAGT
                      ____________________________________________________________
consensus GCTATTATCTTCCCCTGAATCATTGTGTGTATATATTATCAATCCTCATCCTATTTTAGT
 
. : . : . : . : . : . :
rJMSF044L18+ TTTATTGTATAGTAGTGTGGGTTGAGATGCAGTCATGAATGAAATGCCCCTGCCCCTATG
                      ____________________________________________________________
consensus TTTATTGTATAGTAGTGTGGGTTGAGATGCAGTCATGAATGAAATGCCCCTGCCCCTATG
 
. : . : . : . : . : . :
rJMSF044L18+ GTGGCCCTGCCTTCTCACGTGCATTTCAATGTTTCATGCTTGTGTAANCATGACCATGTT
                      ____________________________________________________________
consensus GTGGCCCTGCCTTCTCACGTGCATTTCAATGTTTCATGCTTGTGTAANCATGACCATGTT