Contig 001464:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN003E16Sequence627001464 (3)sp|Q9M7R0.1|ALL8_OLEEU2e-61RecName: Full=Calcium-binding allergen Ole e 8; AltName: Full=PCA18/PCA23; AltN
JMSF043L13Sequence714001464 (3)sp|Q9M7R0.1|ALL8_OLEEU8e-61RecName: Full=Calcium-binding allergen Ole e 8; AltName: Full=PCA18/PCA23; AltN669001464 (3)sp|Q9M7R0.1|ALL8_OLEEU5e-61RecName: Full=Calcium-binding allergen Ole e 8; AltName: Full=PCA18/PCA23; AltN

Alignment

This contig is upended


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JMSF043L13+ TTTTTTTTTTGACAGAGATAGTATTTATAACTATGAAAAAACAGTGATATTTTA
                      ____________________________________________________________
consensus TTTTTTTTTTGACAGAGATAGTATTTATAACTATGAAAAAACAGTGATATTTTA
 
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JMSF043L13+ TAAATAAAATATCAAAGTACTTCCTATTTATAGCAATTAATACTATTATTATTGCGGCGA
                      ____________________________________________________________
consensus TAAATAAAATATCAAAGTACTTCCTATTTATAGCAATTAATACTATTATTATTGCGGCGA
 
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JMSF043L13+ CAATGCAACATGATACCCTACATCCACGCACACCAAAATCATGTGCGTGGCAGCGTATTA
                      ____________________________________________________________
consensus CAATGCAACATGATACCCTACATCCACGCACACCAAAATCATGTGCGTGGCAGCGTATTA
 
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JMSF043L13+ CGCGTCTAGTCTGGATGATGGACGGCTACTGCTTGTTCGTCATCATCTTTTTAAACTCCT
JMFN003E16+ AACTCCT
rJMSF043L13- AACTCCT
                      ____________________________________________________________
consensus CGCGTCTAGTCTGGATGATGGACGGCTACTGCTTGTTCGTCATCATCTTTTTAAACTCCT
 
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JMSF043L13+ CGAAGCTCACGCTGCCGTCGCCGTCGGAATCCACCGATTTGATCATCCCGACGCAGGCGT
JMFN003E16+ CGAAGCTCACGCTGCCGTCGCCGTCGGAATCCACCGATTTGATCATCCCGACGCAGGCGT
rJMSF043L13- CGAAGCTCACGCTGCCGTCGCCGTCGGAATCCACCGATTTGATCATCCCGACGCAGGCGT
                      ____________________________________________________________
consensus CGAAGCTCACGCTGCCGTCGCCGTCGGAATCCACCGATTTGATCATCCCGACGCAGGCGT
 
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JMSF043L13+ CCATGGTGCAGTGCTCGCCGAGGCGGGTGAGGATCTTGTGCAGCTCCGCGGCGGAGATTA
JMFN003E16+ CCATGGTGCAGTGCTCGCCGAGGCGGGTGAGGATCTTGTGCAGCTCCGCGGCGGAGATTA
rJMSF043L13- CCATGGTGCAGTGCTCGCCGAGGCGGGTGAGGATCTTGTGCAGCTCCGCGGCGGAGATTA
                      ____________________________________________________________
consensus CCATGGTGCAGTGCTCGCCGAGGCGGGTGAGGATCTTGTGCAGCTCCGCGGCGGAGATTA
 
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JMSF043L13+ AGCCGTTCCTATCCTCGTCGTAGAGGTCGAACGCCTCGCGGAGCTCGTTCATGCCGCCAT
JMFN003E16+ AGCCGTTCCTATCCTCGTCGTAGAGGTCGAACGCCTCGCGGAGCTCGTTCATGCCGCCAT
rJMSF043L13- AGCCGTTCCTATCCTCGTCGTAGAGGTCGAACGCCTCGCGGAGCTCGTTCATGCCGCCAT
                      ____________________________________________________________
consensus AGCCGTTCCTATCCTCGTCGTAGAGGTCGAACGCCTCGCGGAGCTCGTTCATGCCGCCAT
 
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JMSF043L13+ CGCCGTCGCCCTTGCAGAAGCCGGCGAACTCCTGGAGGTTGATGAATCCGTCCTTGTCGG
JMFN003E16+ CGCCGTCGCCCTTGCAGAAGCCGGCGAACTCCTGGAGGTTGATGAATCCGTCCTTGTCGG
rJMSF043L13- CGCCGTCGCCCTTGCAGAAGCCGGCGAACTCCTGGAGGTTGATGAATCCGTCCTTGTCGG
                      ____________________________________________________________
consensus CGCCGTCGCCCTTGCAGAAGCCGGCGAACTCCTGGAGGTTGATGAATCCGTCCTTGTCGG
 
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JMSF043L13+ TGTCTATTCCCTCCATAATCCTCCCCAGTTCCTCATGCGAGATGTCGGATCCCAGGGCCT
JMFN003E16+ TGTCTATTCCCTCCATAATCCTCCCCAGTTCCTCAGGCGAGATGTCGGATCCCAGGGCCT
rJMSF043L13- TGTCTATTCCCTCCATAATCCTCCCCAGTTCCTCATGCGAGATGTCGGATCCCAGGGCCT
                      ____________________________________________________________
consensus TGTCTATTCCCTCCATAATCCTCCCCAGTTCCTCATGCGAGATGTCGGATCCCAGGGCCT
 
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JMSF043L13+ TCATGACGCCGGCGAGCTCCTCCGCCGAGATCTTGCCGTCGCCGTTGGAGTCGAACCGCT
JMFN003E16+ TCATGACGCCGGCGAGCTCCTCCGCCGAGATCTTGCCGTCGCCGTTGGAGTCGAACCGCT
rJMSF043L13- TCATGACGCCGGCGAGCTCCTCCGCCGAGATCTTGCCGTCGCCGTTGGAGTCGAACCGCT
                      ____________________________________________________________
consensus TCATGACGCCGGCGAGCTCCTCCGCCGAGATCTTGCCGTCGCCGTTGGAGTCGAACCGCT
 
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JMSF043L13+ CGAACACCTTCTGAACCTCCTGCGGGTCCTGCAGGTTCACCGTCGGCCTCGTACTAGGGT
JMFN003E16+ CGAACACCTTCTGAACCTCCTGCGGGTCCTGCAGGTTCACCGTCGGCCTCGTACTAGGGT
rJMSF043L13- CGAACACCTTCTGAACCTCCTGCGGGTCCTGCAGGTTCACCGTCGGCCTCGTACTAGGGT
                      ____________________________________________________________
consensus CGAACACCTTCTGAACCTCCTGCGGGTCCTGCAGGTTCACCGTCGGCCTCGTACTAGGGT
 
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JMSF043L13+ TTGCATTCGTCGCCATTGCCGTTAATATTTGAGAGATAGAGAAGATTTAGTTCACCTACC
JMFN003E16+ TTGCATTCGTCGCCATTGCCGTTAATATTTGAGAGATAGA
rJMSF043L13- TTGCATTCGTCGCCATTGCCGTTAATATTTGAGAGATAGAGAAGATTTAGTTCACCTACC
                      ____________________________________________________________
consensus TTGCATTCGTCGCCATTGCCGTTAATATTTGAGAGATAGAGAAGATTTAGTTCACCTACC