Contig 001459:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP020F02Sequence266001459 (3)
JMSF024C11Sequence377003846 (2)726001459 (3)ref|XP_006339953.1|248PREDICTED: uncharacterized protein LOC102588626 [Solanum tuberosum]
JMSF042P14Sequence437003846 (2)674001459 (3)ref|XP_010090004.1|7e-69hypothetical protein L484_027234 [Morus notabilis] gb|EXB38801.1| hypothetical p

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF024C11+ TTCTACA
                      ____________________________________________________________
consensus TTCTACA
 
. : . : . : . : . : . :
rJMSF024C11+ ATTCCCCATNGAGAAAGATGTGTCTTTGATTTGTAATACAATTCGGTCTTGGCATATTGT
rJMSF042P14+ TCTTGGCATATTGT
                      ____________________________________________________________
consensus ATTCCCCATNGAGAAAGATGTGTCTTTGATTTGTAATACAATTCGGTCTTGGCATATTGT
 
. : . : . : . : . : . :
rJMSF024C11+ TGGACGTCTTGGTGGATGTAATTCAATGAATATGCAATTGTCACAGTCGCCTATGGACAA
rJMSF042P14+ TGGACGTCTTGGTGGATGTAATTCAATGAATATGCAATTGTCACAGTCGCCTATGGACAA
                      ____________________________________________________________
consensus TGGACGTCTTGGTGGATGTAATTCAATGAATATGCAATTGTCACAGTCGCCTATGGACAA
 
. : . : . : . : . : . :
rJMSF024C11+ AAGACCAAGTTATGATGCAATTCAAGGGGCAAATGTAACACCAAGTACATTTTATAACAT
rJMSF042P14+ AAGACCAAGTTATGATGCAATTCAAGGGGCAAATGTAACACCAAGTACATTTTATAACAT
                      ____________________________________________________________
consensus AAGACCAAGTTATGATGCAATTCAAGGGGCAAATGTAACACCAAGTACATTTTATAACAT
 
. : . : . : . : . : . :
rJMSF024C11+ AGGTGATCTTGAGATTCAAGATAATTTAGCTCGCATTTGGGTCGATATTGGGACGAGTGA
rJMSF042P14+ AGGTGATCTTGAGATTCAAGATAATTTAGCTCGCATTTGGGTCGATATTGGGACGAGTGA
                      ____________________________________________________________
consensus AGGTGATCTTGAGATTCAAGATAATTTAGCTCGCATTTGGGTCGATATTGGGACGAGTGA
 
. : . : . : . : . : . :
rJMSF024C11+ ACCACTACTCTTGGATATACTAATCAATGCATTGACACAGATAAGTTCTGACTATATAGG
rJMSF042P14+ ACCACTACTCTTGGATATACTAATCAATGCATTGACACAGATAAGTTCTGACTATATAGG
                      ____________________________________________________________
consensus ACCACTACTCTTGGATATACTAATCAATGCATTGACACAGATAAGTTCTGACTATATAGG
 
. : . : . : . : . : . :
rJMSF024C11+ AATTAAGCAAGTAGTATTTGGTGGATCTGAATTTGAGGGGTGGAAAGAGAACTTGAAATC
rJMSF042P14+ AATTAAGCAAGTAGTATTTGGTGGATCTGAATTTGAGGGGTGGAAAGAGAACTTGAAATC
                      ____________________________________________________________
consensus AATTAAGCAAGTAGTATTTGGTGGATCTGAATTTGAGGGGTGGAAAGAGAACTTGAAATC
 
. : . : . : . : . : . :
rJMSF024C11+ GGAGGATTTGGGCTACAATGTACACAAGATTTAGCTGCCGGTGCAGAGTGCAGAATGGCA
rJMSF042P14+ GGAGGATTTGGGCTACAATGTACACAAGATTTAGCTGCCGGTGCAGAGTGCAGAATGGCA
                      ____________________________________________________________
consensus GGAGGATTTGGGCTACAATGTACACAAGATTTAGCTGCCGGTGCAGAGTGCAGAATGGCA
 
. : . : . : . : . : . :
rJMSF024C11+ ACGTGCAGAGTGTCTAGCTGCCGGTTATTATAAAGTCCAGTTTGTTTCAAGAGATGCCAC
JMCP020F02- GCAGAGTGTCTAGCTGCCGGTTATTATAAGGTCCAGTTTGTTTCAAGAGATGCCAC
rJMSF042P14+ ACGTGCAGAGTGTCTAGCTGCCGGTTATTATAAAGTCCAGTTTGTTTCAAGAGATGCCAC
                      ____________________________________________________________
consensus ACGTGCAGAGTGTCTAGCTGCCGGTTATTATAAAGTCCAGTTTGTTTCAAGAGATGCCAC
 
. : . : . : . : . : . :
rJMSF024C11+ TGCAAGCATTATGTTCTAGATGGAGATATCTAAGCATCCTGATAGTCTACCTGATTTCAT
JMCP020F02- TGCAAGCATTATGTTCTAGATGGAGATATCTAAGCATCCTGATAGTCTACCTGATTTCAT
rJMSF042P14+ TGCAAGCATTATGTTCTAGATGGAGATATCTAAGCATCCTGATAGTCTACCTGATTTCAT
                      ____________________________________________________________
consensus TGCAAGCATTATGTTCTAGATGGAGATATCTAAGCATCCTGATAGTCTACCTGATTTCAT
 
. : . : . : . : . : . :
rJMSF024C11+ GAACTAGAACATTATGATCTTCTACATTTGTAACATGTACTATATTTGATTAGAGTCATC
JMCP020F02- GAACTAGAACATTATGATCTTCCACATTTGTAACATGTACTATATTTGATTAGAGTCATC
rJMSF042P14+ GAACTAGAACATTATGATCTTCTACATTTGTAACATGTACTATATTTGATTAGAGTCATC
                      ____________________________________________________________
consensus GAACTAGAACATTATGATCTTCTACATTTGTAACATGTACTATATTTGATTAGAGTCATC
 
. : . : . : . : . : . :
rJMSF024C11+ AGCTATTGCGCTAACTCAAAAAGTGTATAAAGTAGAGAATATTTTAGAACACCTGACTGT
JMCP020F02- AGCTATTGCGCTAACTCAAAAAGTGTATAAAGTAGAGAATATTTTAGAACACCTGACTGT
rJMSF042P14+ AGCTATTGCGCTAACTCAAAAAGTGTATAAAGTAGAGAATATTTTAGAACACCTGACTGT
                      ____________________________________________________________
consensus AGCTATTGCGCTAACTCAAAAAGTGTATAAAGTAGAGAATATTTTAGAACACCTGACTGT
 
. : . : . : . : . : . :
rJMSF024C11+ TAGCTAAGAATTTGTGTCTGGGGTGTCATTTCAATTGCTTCTGTAATCTTAGGC
JMCP020F02- TAGCTAAGAATTTGTGTCTGGGGTGTC
rJMSF042P14+ TAGCTAAGAATTTGTGTCTGGGGTGTCATTTCAATTGCTTCTGTAATCTTAGGCATGCAT
                      ____________________________________________________________
consensus TAGCTAAGAATTTGTGTCTGGGGTGTCATTTCAATTGCTTCTGTAATCTTAGGCATGCAT