clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFN033B20 | Sequence | 613 | 001455 (3) | ref|XP_010101099.1| | 6e-121 | putative pectinesterase/pectinesterase inhibitor 17 [Morus notabilis] gb|EXC4524 | |||||
JMSF003E16 | Sequence | 265 | 006356 (13) | ref|XP_004234932.2| | 1e-15 | PREDICTED: probable pectinesterase/pectinesterase inhibitor 17 [Solanum lycoper | 750 | 001455 (3) | ref|XP_006367816.1| | 2e-137 | PREDICTED: probable pectinesterase/pectinesterase inhibitor 17-like [Solanum tu |
JMSF041L05 | Sequence | 712 | 006356 (13) | ref|XP_009627969.1| | 2e-90 | PREDICTED: probable pectinesterase/pectinesterase inhibitor 17 [Nicotiana tomen | 662 | 001455 (3) | ref|XP_006367816.1| | 1e-112 | PREDICTED: probable pectinesterase/pectinesterase inhibitor 17-like [Solanum tu |
This contig is upended
. : . : . : . : . : . :
JMFN033B20- ACTACAAGACCATCAAAGACGCCCTCGATGCCGCCGGTAAGAGGAGCGGGAGCGG
____________________________________________________________
consensus ACTACAAGACCATCAAAGACGCCCTCGATGCCGCCGGTAAGAGGAGCGGGAGCGG
. : . : . : . : . : . :
JMFN033B20- AAGATTTGTTATACATATAAAACGCGGCGTTTACAATGAAAACCTTGACATTGGGAACAA
____________________________________________________________
consensus AAGATTTGTTATACATATAAAACGCGGCGTTTACAATGAAAACCTTGACATTGGGAACAA
. : . : . : . : . : . :
JMFN033B20- ACTGAAGAACATAATGCTTGTTGGTGACGGAATGAGATATACTTACATCTCCGGCAGCCG
____________________________________________________________
consensus ACTGAAGAACATAATGCTTGTTGGTGACGGAATGAGATATACTTACATCTCCGGCAGCCG
. : . : . : . : . : . :
JMFN033B20- GAGCGTCGTCGGTGGCTCCACCACCTTCAACTCTGCAACTGTTGCGGTGACCGGGGATGG
____________________________________________________________
consensus GAGCGTCGTCGGTGGCTCCACCACCTTCAACTCTGCAACTGTTGCGGTGACCGGGGATGG
. : . : . : . : . : . :
JMFN033B20- GTTTATAGCACAGGGCATAACATTCCGGAACACCGCCGGGCCGGAGAACCACCAGGCCGT
rJMSF003E16+ CACCGCCGGGCCGGAGAACCACCAGGCCGT
____________________________________________________________
consensus GTTTATAGCACAGGGCATAACATTCCGGAACACCGCCGGGCCGGAGAACCACCAGGCCGT
. : . : . : . : . : . :
JMFN033B20- GGCGTTGAGGTCCGGCGCCGATCTTTCCGTCTTCTACAAATGCGGATTCGAAGGCTACCA
rJMSF003E16+ GGCGTTGAGGTCCGGCGCCGATCTTTCCGTCTTCTACAAATGCGGATTCGAAGGCTACCA
____________________________________________________________
consensus GGCGTTGAGGTCCGGCGCCGATCTTTCCGTCTTCTACAAATGCGGATTCGAAGGCTACCA
. : . : . : . : . : . :
JMFN033B20- AGACACCCTCTACGCCCACTCCCAACGACAGTTCTACAAAGATTGTTACATCTACGGAAC
rJMSF003E16+ AGACACCCTCTACGCCCACTCCCAACGACAGTTCTACAAAGATTGTTACATCTACGGAAC
rJMSF041L05+ TACGCCCACTCCCAACGACAGTTCTACAAAGATTGTTACATCTACGGAAC
____________________________________________________________
consensus AGACACCCTCTACGCCCACTCCCAACGACAGTTCTACAAAGATTGTTACATCTACGGAAC
. : . : . : . : . : . :
JMFN033B20- CGTCGACTTCATCTTCGGAAACGCCGCCGTTGTTTTCCAGAACTGTATGATATACGCAAG
rJMSF003E16+ CGTCGACTTCATCTTCGGAAACGCCGCCGTTGTTTTCCAGAACTGTATGATATACGCAAG
rJMSF041L05+ CGTCGACTTCATCTTCGGAAACGCCGCCGTTGTTTTCCAGAACTGTATGATATACGCAAG
____________________________________________________________
consensus CGTCGACTTCATCTTCGGAAACGCCGCCGTTGTTTTCCAGAACTGTATGATATACGCAAG
. : . : . : . : . : . :
JMFN033B20- GAAGCCGATGGACAAGCAGAAGATCACCATAACGGCCCAGGGCCGGACCGACCCGAACCA
rJMSF003E16+ GAAGCCGATGGACAAGCAGAAGATCACCATAACGGCCCAGGGCCGGACCGACCCGAACCA
rJMSF041L05+ GAAGCCGATGGACAAGCAGAAGATCACCATAACGGCCCAGGGCCGGACCGACCCGAACCA
____________________________________________________________
consensus GAAGCCGATGGACAAGCAGAAGATCACCATAACGGCCCAGGGCCGGACCGACCCGAACCA
. : . : . : . : . : . :
JMFN033B20- GAACACCGGAATCTCTATCCACAACTCGCGAGTCATGGCGGCGGCGGACCTCAAGCCGGT
rJMSF003E16+ GAACACCGGAATCTCTATCCACAACTCGCGAGTCATGGCGGCGGCGGACCTCAAGCCGGT
rJMSF041L05+ GAACACCGGAATCTCTATCCACAACTCGCGAGTCATGGCGGCGGCGGACCTCAAGCCGGT
____________________________________________________________
consensus GAACACCGGAATCTCTATCCACAACTCGCGAGTCATGGCGGCGGCGGACCTCAAGCCGGT
. : . : . : . : . : . :
JMFN033B20- TTTGAGTTCCTTCAAGAC
rJMSF003E16+ TTTGAGTTCCTTCAAGACTTTCTTGGGTAGGCCGTGGAAGGAATATTCTCGAACCGTTTT
rJMSF041L05+ TTTGAGTTCCTTCAAGACTTTCTTGGGTAGGCCGTGGAAGGAATATTCTCGAACCGTTTT
____________________________________________________________
consensus TTTGAGTTCCTTCAAGACTTTCTTGGGTAGGCCGTGGAAGGAATATTCTCGAACCGTTTT
. : . : . : . : . : . :
rJMSF003E16+ TCTTCAGACGTACATGGAGTCTGTAGTTGACCCGGCAGGTTGGCTCGAGTGGGACGGCCA
rJMSF041L05+ TCTTCAGACGTACATGGAGTCTGTAGTTGACCCGGCAGGTTGGCTCGAGTGGGACGGCCA
____________________________________________________________
consensus TCTTCAGACGTACATGGAGTCTGTAGTTGACCCGGCAGGTTGGCTCGAGTGGGACGGCCA
. : . : . : . : . : . :
rJMSF003E16+ GTTTGCGTTGAAGACGCTGTTTTATGGCGAATACAAGAACTCTGGACCGGGTTCGTCGAC
rJMSF041L05+ GTTTGCGTTGAAGACGCTGTTTTATGGCGAATACAAGAACTCTGGACCGGGTTCGTCGAC
____________________________________________________________
consensus GTTTGCGTTGAAGACGCTGTTTTATGGCGAATACAAGAACTCTGGACCGGGTTCGTCGAC
. : . : . : . : . : . :
rJMSF003E16+ GGGTCAGAGAGTCCGGTGGGGTGGCTACCGCGTTATCAGCAGTGCAAGTGAGGCGGCCCG
rJMSF041L05+ GGGTCAGAGAGTCCGGTGGGGTGGCTACCGCGTTATCAGCAGTGCAAGTGAGGCGGCCCG
____________________________________________________________
consensus GGGTCAGAGAGTCCGGTGGGGTGGCTACCGCGTTATCAGCAGTGCAAGTGAGGCGGCCCG
. : . : . : . : . : . :
rJMSF003E16+ GTTCAGCGTCGAGAATTTTATCGCGGGCCGGTCGTGGTTGCCGGCGACCAACGTTCCGTT
rJMSF041L05+ GTTCAGCGTCGAGAATTTTATCGCGGGCCGGTCGTGGTTGCCGGCGACCAACGTTCCGTT
____________________________________________________________
consensus GTTCAGCGTCGAGAATTTTATCGCGGGCCGGTCGTGGTTGCCGGCGACCAACGTTCCGTT
. : . : . : . : . : . :
rJMSF003E16+ TAACGCTGGACTGTGAAAATGGTGACTCAGTATGTGCAATATCTTCTGTGTTTTATATCC
rJMSF041L05+ TAACGCTGGACTGTGAAAATGGTGACTCAGTATGTGCAATATCTTCTGTGTTTTATATCC
____________________________________________________________
consensus TAACGCTGGACTGTGAAAATGGTGACTCAGTATGTGCAATATCTTCTGTGTTTTATATCC
. : . : . : . : . : . :
rJMSF003E16+ TTTATTATTTTGTTTAGTTTTATTTTATTTCATCTTTTTTACCGTCTTTAATGTATTTAT
rJMSF041L05+ TTTATTATTTTGTTTAGTTTTATTTTATTTCATTTTTTTTACCGTCTTTAATGTATTTAT
____________________________________________________________
consensus TTTATTATTTTGTTTAGTTTTATTTTATTTCATTTTTTTTACCGTCTTTAATGTATTTAT