Contig 001450:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF023L16Sequence596005092 (2)ref|XP_006353223.1|1e-10PREDICTED: uncharacterized protein LOC102593154 isoform X2 [Solanum tuberosum]716001450 (2)ref|XP_009802514.1|2e-30PREDICTED: uncharacterized protein LOC104248031 isoform X2 [Nicotiana sylvestri
JMSF040P22Sequence689005092 (2)ref|XP_006353223.1|2e-10PREDICTED: uncharacterized protein LOC102593154 isoform X2 [Solanum tuberosum]792001450 (2)ref|XP_009802514.1|2e-45PREDICTED: uncharacterized protein LOC104248031 isoform X2 [Nicotiana sylvestri

Alignment

This contig is upended


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rJMSF040P22+                                                          GAGGATGATGTA
                      ____________________________________________________________
consensus                                                             GAGGATGATGTA
 
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rJMSF023L16+                                                                 CTGCA
rJMSF040P22+          TTGAATAACAATTTCAATATATTGCGGATGTTTGGCAGAATATATGGACCTTCGGCTGCA
                      ____________________________________________________________
consensus             TTGAATAACAATTTCAATATATTGCGGATGTTTGGCAGAATATATGGACCTTCGGCTGCA
 
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rJMSF023L16+          CCAGTCATCCTGGCACAGTGCATAACAGAAGCAGAAGGGAAGTATGATAGTCTTTTGAAA
rJMSF040P22+          CCAGTCATCCTGGCACAGTGCATAACAGAAGCAGAAGGGAAGTATGATAGTCTTTTGAAA
                      ____________________________________________________________
consensus             CCAGTCATCCTGGCACAGTGCATAACAGAAGCAGAAGGGAAGTATGATAGTCTTTTGAAA
 
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rJMSF023L16+          GCTCTTGACCCCGAATTATCTGTTAGCCATCAGAGAAGATGTGAAGAAGCTACTAAAGAA
rJMSF040P22+          GCTCTTGACCCCGAATTATCTGTTAGCCATCAGAGAAGATGTGAAGAAGCTACTAAAGAA
                      ____________________________________________________________
consensus             GCTCTTGACCCCGAATTATCTGTTAGCCATCAGAGAAGATGTGAAGAAGCTACTAAAGAA
 
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rJMSF023L16+          GGTGGGAAGACATGTGGTCCTTCTCTCGGGACATGGTGCATACCTCCTATCATTGCAGAC
rJMSF040P22+          GGTGGGAAGACATGTGGTCCTTCTCTCGGGACATGGTGCATACCTCCTATCATTGCAGAC
                      ____________________________________________________________
consensus             GGTGGGAAGACATGTGGTCCTTCTCTCGGGACATGGTGCATACCTCCTATCATTGCAGAC
 
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rJMSF023L16+          GAGGATCTATACCGGTCTAAAGTTTTGAGGTCCGATCCAAGCTAAGCCATAAGCTAGGGA
rJMSF040P22+          GAGGATCTATACCGGTCTAAAGTTTTGAGGTCCGATCCAAGCTAAGCCATAAGCTAGGGA
                      ____________________________________________________________
consensus             GAGGATCTATACCGGTCTAAAGTTTTGAGGTCCGATCCAAGCTAAGCCATAAGCTAGGGA
 
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rJMSF023L16+          GCAACCAAATCAGATGAGATGTCAGACCGAAACCAACTTGCAGAACTCACAAAAGATGGA
rJMSF040P22+          GCAACCAAATCAGATGAGATGTCAGACCGAAACCAACTTGCAGAACTCACAAAAGATGGA
                      ____________________________________________________________
consensus             GCAACCAAATCAGATGAGATGTCAGACCGAAACCAACTTGCAGAACTCACAAAAGATGGA
 
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rJMSF023L16+          GCTTAGGTTGTTCAACGTATACAATGAATATAATGAACATACAATGTATGTTCAATGTCT
rJMSF040P22+          GCTTAGGTTGTTCAACGTATACAATGAATATAATGAACATACAATGTATGTTCAATGTCT
                      ____________________________________________________________
consensus             GCTTAGGTTGTTCAACGTATACAATGAATATAATGAACATACAATGTATGTTCAATGTCT
 
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rJMSF023L16+          CAATTAATCAAGTTTTCACTTTCTTCTACCTTGCCAACACGTTTTTTTTACTCGAAACAA
rJMSF040P22+          CAATTAATCAAGTTTTCACTTTCTTCTACCTTGCCAACACGTTTTTTTTACTCGAAACAA
                      ____________________________________________________________
consensus             CAATTAATCAAGTTTTCACTTTCTTCTACCTTGCCAACACGTTTTTTTTACTCGAAACAA
 
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rJMSF023L16+          TGGAAAGAGCATTCATAAGCATCTACAGTAGCATTCAAATCATCATAAAATCACATTTCC
rJMSF040P22+          TGGAAAGAGCATTCATAAGCATCTACAGTAGCATTCAAATCATCATAAAATCACATTTCC
                      ____________________________________________________________
consensus             TGGAAAGAGCATTCATAAGCATCTACAGTAGCATTCAAATCATCATAAAATCACATTTCC
 
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rJMSF023L16+          ATGTCCTCGATTTGCTGATCGTCTTCCCAGAACCCATCTGATATCTCTTTGTAGTCATCA
rJMSF040P22+          ATGTCCTCGATTTGCTGATCGTCTTCCCAGAACCCATCTGATATCTCTTTGTAGTCATCA
                      ____________________________________________________________
consensus             ATGTCCTCGATTTGCTGATCGTCTTCCCAGAACCCATCTGATATCTCTTTGTAGTCATCA
 
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rJMSF023L16+          TCCGTGTCGCAAGCCACAAAGTCCTATGGCAGATAGCCAGATGAAGCCGAAAAATCAGAG
rJMSF040P22+          TCCGTGTCGCAAGCCACAAAGTCCTATGGCAGATAGCCAGATGAAGCCGAAAAATCAGAG
                      ____________________________________________________________
consensus             TCCGTGTCGCAAGCCACAAAGTCCTATGGCAGATAGCCAGATGAAGCCGAAAAATCAGAG
 
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rJMSF023L16+          CATTTGTCCTGGCCAAGGCAAATATTTTTTATTGCTAGTTACCGAGTCTAAGGGACTCTA
rJMSF040P22+          CATTTGTCCTGGCCAAGGCAAATATTTTTTATTGCTAGTTACCGAGTCTAAGGGACTCTA
                      ____________________________________________________________
consensus             CATTTGTCCTGGCCAAGGCAAATATTTTTTATTGCTAGTTACCGAGTCTAAGGGACTCTA
 
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rJMSF023L16+          AATGTGAAAAGACAGCAATTCAATGTTTTCTCAGTTGCAAAAAAA               
rJMSF040P22+          AATGTGAAAAGACAGCAATTCAATGTTTTCTCAGTTGCAAAAAAAACAGGCCATGTTCTT
                      ____________________________________________________________
consensus             AATGTGAAAAGACAGCAATTCAATGTTTTCTCAGTTGCAAAAAAAACAGGCCATGTTCTT