Contig 001445:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF039C22+                                                                TTGATG
                      ____________________________________________________________
consensus                                                                   TTGATG
 
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rJMSF039C22+          AAGCTTTTTGGATCAAAACTTGCCAAAACTGGAAAAGTAGACAATGATGCGTCCGAAACA
                      ____________________________________________________________
consensus             AAGCTTTTTGGATCAAAACTTGCCAAAACTGGAAAAGTAGACAATGATGCGTCCGAAACA
 
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rJMSF015J19+                       ATAAGCCGCTTCTCGAATCATCGTGTGCACAGCAGGATTGTCAGTCT
rJMSF039C22+          CAATCGTTTAGTAATAAGCCGCTTCTCGAATCATCGTGTGCACAGCAGGATTGTCAGTCT
                      ____________________________________________________________
consensus             CAATCGTTTAGTAATAAGCCGCTTCTCGAATCATCGTGTGCACAGCAGGATTGTCAGTCT
 
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rJMSF015J19+          CCCGAAGAGGCAATCTTGGAAAGTCATGCTACTGTGCCAACAAATGTCGAACCAAACAAG
rJMSF039C22+          CCCGAAGAGGCAATCTTGGAAAGTCATGCTACTGTGCCAACAAATGTCGAACCAAACAAG
                      ____________________________________________________________
consensus             CCCGAAGAGGCAATCTTGGAAAGTCATGCTACTGTGCCAACAAATGTCGAACCAAACAAG
 
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rJMSF015J19+          AATGACCATAGTACTTTCGACGAGAGTGCTGAAAAGATTTCCAAAAAAGCCCTTGATTCG
rJMSF039C22+          AATGACCATAGTACTTTCGACGAGAGTGCTGAAAAGATTTCCAAAAAAGCCCTTGATTCG
                      ____________________________________________________________
consensus             AATGACCATAGTACTTTCGACGAGAGTGCTGAAAAGATTTCCAAAAAAGCCCTTGATTCG
 
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rJMSF015J19+          GATGCCATGCCAAATAACGAGGAAGGGATTTCGGATAAAACGTCAGCTGCACCTGCTAGC
rJMSF039C22+          GATGCCATGCCAAATAACGAGGAAGGGATTTCGGATAAAACGTCAGCTGCACCTGCTAGC
                      ____________________________________________________________
consensus             GATGCCATGCCAAATAACGAGGAAGGGATTTCGGATAAAACGTCAGCTGCACCTGCTAGC
 
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rJMSF015J19+          GAAGTTCAATGCAGAAACACTGAGAAGACCGCTGAAAATTCTCGTGGAAACCCTTTAGGA
rJMSF039C22+          GAAGTTCAATGCAGAAACACTGAGAAGACCGCTGAAAATTCTCGTGGAAACCCTTTAGGA
                      ____________________________________________________________
consensus             GAAGTTCAATGCAGAAACACTGAGAAGACCGCTGAAAATTCTCGTGGAAACCCTTTAGGA
 
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rJMSF015J19+          CCCGAGTTGCAAGACGTGGGTAATAGTGAGGACAAAGCCTCCGCTAATTTTTCAATTGGT
rJMSF039C22+          CCCGAGTTGCAAGACGTGGGTAATAGTGAGGACAAAGCCTCCGCTAATTTTTCAATTGGT
                      ____________________________________________________________
consensus             CCCGAGTTGCAAGACGTGGGTAATAGTGAGGACAAAGCCTCCGCTAATTTTTCAATTGGT
 
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rJMSF015J19+          AGCCACGATCACGGGGAGGCTAGTTTCTCTTCGGTTGGTCCTATGTCGGGTTTAATTTCT
rJMSF039C22+          AGCCACGATCACGGGGAGGCTAGTTTCTCTTCGGTTGGTCCTATGTCGGGTTTAATTTCT
                      ____________________________________________________________
consensus             AGCCACGATCACGGGGAGGCTAGTTTCTCTTCGGTTGGTCCTATGTCGGGTTTAATTTCT
 
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rJMSF015J19+          TATTCCGGACTAATCCCACATTCCGGGAACATTTCTCTTCGATCGGATAGCAGCACCACC
rJMSF039C22+          TATTCCGGACTAATCCCACATTCCGGGAACATTTCTCTTCGATCGGATAGCAGCACCACC
                      ____________________________________________________________
consensus             TATTCCGGACTAATCCCACATTCCGGGAACATTTCTCTTCGATCGGATAGCAGCACCACC
 
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rJMSF015J19+          AGCGCAAGATCCTTTGCTTTCCCAATACTACAATCCGAGTGGAATAGCAGTCCGGTAAGA
rJMSF039C22+          AGCGCAAGATCCTTTGCTTTCCCAATACTACAATCCGAGTGGAATAGCAGTCCGGTAAGA
                      ____________________________________________________________
consensus             AGCGCAAGATCCTTTGCTTTCCCAATACTACAATCCGAGTGGAATAGCAGTCCGGTAAGA
 
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rJMSF015J19+          ATGGCAAAAGGAGATGGGAGATACCGAAAGAACCGGGGTTGGATGCAGGGCCTTCTTTGC
rJMSF039C22+          ATGGCAAAAGGAGATGGGAGATACCGAAAGAACCGGGGTTGGATGCAGGGCCTTCTTTGC
                      ____________________________________________________________
consensus             ATGGCAAAAGGAGATGGGAGATACCGAAAGAACCGGGGTTGGATGCAGGGCCTTCTTTGC
 
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rJMSF015J19+          TGTAGATTCTAAATTCTTTACTATTTCATTTAGGCTCTTAGGTAAAACGCATATACACAC
rJMSF039C22+          TGTAGATTCTAAATTCTTTACTATTTCATTTAGGCTCTTAGGTAAAACGCATATACACAC
                      ____________________________________________________________
consensus             TGTAGATTCTAAATTCTTTACTATTTCATTTAGGCTCTTAGGTAAAACGCATATACACAC
 
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rJMSF015J19+          ACATCATGAAGACCAGAAGTTTTTTTAAACCGAATGCTATTTGATACATGTTGATACATA
rJMSF039C22+          ACATCATGAAGACCAGAAGTTTTTTTAAACCGAATGCTATTTGATACATGTTGATACATA
                      ____________________________________________________________
consensus             ACATCATGAAGACCAGAAGTTTTTTTAAACCGAATGCTATTTGATACATGTTGATACATA
 
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rJMSF015J19+          TATATATATCTCAAGTTT-CGGGTGCACTGAAGCATATGCAGGCAAC             
rJMSF039C22+          TATATATATCTCAAGTTTGCGGGTGCACTGAAGCATATGCAGGCAACCAGATGTAAAAAC
                      ____________________________________________________________
consensus             TATATATATCTCAAGTTTGCGGGTGCACTGAAGCATATGCAGGCAACCAGATGTAAAAAC