Contig 001442:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017G11Sequence108016269571001442 (5)gb|KDP47007.1|2e-42hypothetical protein JCGZ_10734 [Jatropha curcas]
JMFN033H15Sequence572001442 (5)gb|KDP47007.1|2e-52hypothetical protein JCGZ_10734 [Jatropha curcas]
JMSF004P16Sequence197003540 (11)326001442 (5)
JMSF032N21Sequence650010830 (7)ref|XP_009801502.1|2e-118PREDICTED: delta(24)-sterol reductase-like isoform X1 [Nicotiana sylvestris] re538001442 (5)gb|ABD60147.1|3e-43diminuto [Morus alba]
JMSF038O20Sequence655010830 (7)ref|XP_009801502.1|3e-82PREDICTED: delta(24)-sterol reductase-like isoform X1 [Nicotiana sylvestris] re678001442 (5)gb|EYU19065.1|6e-74hypothetical protein MIMGU_mgv1a003798mg [Erythranthe guttata] gb|EYU19066.1| hy

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF038O20+ TTTGCCCACACAGACTATA
                      ____________________________________________________________
consensus TTTGCCCACACAGACTATA
 
. : . : . : . : . : . :
rJMSF038O20+ CAGGCTCCCGATCAAGACCATGGTGTACCCCGAGCCAGGATTTGAGCTGCACCGCAGGCA
                      ____________________________________________________________
consensus CAGGCTCCCGATCAAGACCATGGTGTACCCCGAGCCAGGATTTGAGCTGCACCGCAGGCA
 
. : . : . : . : . : . :
rJMFF017G11+ CAGATGTACNCTGACGTTGGTGTTTNCTATACACCTGCCTC
rJMSF032N21+ CAGATGTACACTGACGTTGGTGTNTACTATACACCTGCCTC
JMFN033H15- CAGATGTACACTGACGTTGGTGTCTACTATACACCTGCCTC
rJMSF038O20+ GGGCGATACACATTACGCTCAGATGTACACTGACGTTGGTGTCTACTATACACCTGCCTC
                      ____________________________________________________________
consensus GGGCGATACACATTACGCTCAGATGTACACTGACGTTGGTGTCTACTATACACCTGCCTC
 
. : . : . : . : . : . :
rJMFF017G11+ CGTNTTTAGAGGNGAAGTGTTTGATGGTTCATTGGCTGTGCAACGAATGGAGGAGTGGTT
rJMSF032N21+ CGTCTTTAGAGGCGAAGTGTTTGATGGTTCATTGGCTGTGCAACGAATGGAGGAGTGGTT
JMFN033H15- CGTCTTTAGAGGCGAAGTGTTTGATGGTTCATTGGCTGTGCAACGAATGGAGGAGTGGTT
rJMSF038O20+ CGTCTTTAGAGGCGAAGTGTTTGATGGTTCATTGGCTGTGCAACGAATGGAGGAGTGGTT
                      ____________________________________________________________
consensus CGTCTTTAGAGGCGAAGTGTTTGATGGTTCATTGGCTGTGCAACGAATGGAGGAGTGGTT
 
. : . : . : . : . : . :
rJMFF017G11+ GATTGAGAACCNCGGTTTCCAGCCNCAATATGCTGTGTTTGAGTTGACCGAGAAGAACTT
rJMSF032N21+ GATTGAGAACCNCGGTTTCCAGCCNCAATATGCTGTGTNTGAGTTGACCGAGAAGAACTT
JMFN033H15- GATTGAGAACCACGGTTTCCAGCCACAATATGCTGTGTCTGAGTTGACCGAGAAGAACTT
rJMSF038O20+ GATTGAGAACCNCGGTTTCCAGCCNCAATATGCTGTGTCTGAGTTGACCGAGAAGAACTT
                      ____________________________________________________________
consensus GATTGAGAACCACGGTTTCCAGCCACAATATGCTGTGTCTGAGTTGACCGAGAAGAACTT
 
. : . : . : . : . : . :
rJMFF017G11+ TTGGAGGATGTTTGATGCTGGGCTNTACGAGCNCTGCAGACGCAAGTATAAGGCCGTGGG
rJMSF032N21+ NTGGAGGATGTTTGATGCTGGGCTNTACGAGCNCTGCAGACGCAAGTATAAGGCCGTGGG
JMFN033H15- CTGGAGGATGTTTGATGCTGGGCTCTACGAGCACTGCAGACGCAAGTATAAGGCCGTGGG
rJMSF038O20+ CTGGAGGATGTTTGATGCTGGGCTCTACGAGCNCTGCAGACGCAAGTATAAGGCCGTGGG
                      ____________________________________________________________
consensus CTGGAGGATGTTTGATGCTGGGCTCTACGAGCACTGCAGACGCAAGTATAAGGCCGTGGG
 
. : . : . : . : . : . :
rJMFF017G11+ CNCCTTCATGAGCGTGTNCTNCAAATNGAAGAAAGGAAGGAAGACCGAGAAGGAGGTGCA
rJMSF032N21+ CNCCTTCATGAGCGTGTACTACAAATCGAAGAAAGGAAGGAAGACCGAGAAGGAGGTGCN
rJMSF004P16+ AAATCGAAGAAAGGAAGGAAGACCGAGAAGGAGGTGCA
JMFN033H15- CACCTTCATGAGCGTGTACTACAAATCGAAGAAAGGAAGGAAGACCGAGAAGGAGGTGCA
rJMSF038O20+ CACCTTCATGAGCGTGTACTACAAATCGAAGAAAGGAAGGAAGACCGAGAAGGAGGTGCA
                      ____________________________________________________________
consensus CACCTTCATGAGCGTGTACTACAAATCGAAGAAAGGAAGGAAGACCGAGAAGGAGGTGCA
 
. : . : . : . : . : . :
rJMFF017G11+ GGATGCCGAGAAAGAGAAAGCTGAAGTCGAGACCCCTGATTGTGATTAGTGTTTTGCATC
rJMSF032N21+ GGATGCCGAGAAAGAGAAAGCTGAAGTCGAGACCCCTGATTGTGATTAGTGTTTTGCATC
rJMSF004P16+ GGATGCCGAGAAAGAGAAAGCTGAAGTCGAGACCCCTGATTGNGATTAGTGTTTTGCATC
JMFN033H15- GGATGCCGAGAAAGAGAAAGCTGAAGTCGAGACCCCTGATTGTGATTAGTGTTTTGCATC
rJMSF038O20+ GGATGCCGAGAAAGAGAAAGCTGAAGTCGAGACCCCTGATTGTGATTAGTGTTTTGCATC
                      ____________________________________________________________
consensus GGATGCCGAGAAAGAGAAAGCTGAAGTCGAGACCCCTGATTGTGATTAGTGTTTTGCATC
 
. : . : . : . : . : . :
rJMFF017G11+ GTATTGATTTTAGGTTGGAGTGGTGATTAGTNTTTTGCATCGTATCGATTTTAGGTTGGG
rJMSF032N21+ GTATTGATTTTAGGTTGGAGTGGNGATTAGTCTTTTGCATCGTATCGATTTTAGGTTGGG
rJMSF004P16+ GNATTGATTTTAGGTTGGAGTGGTGATTAGTCTTNTGCATCGTATCGATTTTAGGTTGGG
JMFN033H15- GTATTGATTTTAGGTTGGAGTGGTGATTAGTCTTTTGCATCGTATCGATTTTAGGTTGGG
rJMSF038O20+ GTATTGATTTTAGGTTGGAGTGGTGATTAGTCTTTTGCATCGTATCGATTTTAGGTTGGG
                      ____________________________________________________________
consensus GTATTGATTTTAGGTTGGAGTGGTGATTAGTCTTTTGCATCGTATCGATTTTAGGTTGGG
 
. : . : . : . : . : . :
rJMFF017G11+ GTTTGGACTCGAANGTCGTGGTTAGGGTTCATGTGTTTGTGGCCATTTGTCATTTCTGTA
rJMSF032N21+ GTTTGGACTCGAANGTCGTGGTTAGGGTTCANGTGTTTGTGGCCNTTTGTCNTTTCTGTA
rJMSF004P16+ GTTTGGACTCGAANGTCGTGGTTAGGGTTCNNGTGTNTGTGGCCNTTTGNCATNTCCGTA
JMFN033H15- GTTTGGACTCGAATGTCGTGGTTAGGGTTCATGTGTTTGTGGCCATTTGTCATTTCTGTA
rJMSF038O20+ GTTTGGACTCGAATGTCGTGGTTAGGGTTCATGTGTTTGTGGCCNTTTGTCATTTCTGTA
                      ____________________________________________________________
consensus GTTTGGACTCGAATGTCGTGGTTAGGGTTCATGTGTTTGTGGCCATTTGTCATTTCTGTA
 
. : . : . : . : . : . :
rJMFF017G11+ GTTTTTTTTTTTCTTTCTGAAGTTTGTGTATTTGGGTTCAGTACTCTGACTCTTTTATCT
rJMSF032N21+ GTTTTTTTTTTTCTTTCTGAAGTTTGTGTATTTGGGTTTAGTACTCTGACTCTTTTATCT
rJMSF004P16+ GTTTNTTTTTTTCTTTCTGAAGTTTGTGTATTTGGGTTTAGTACTCTGACTCTTTTATCT
JMFN033H15- GTTTTTTTTTTTCTTTCTGAAGTTTGTGTATTTGGGTTTAGTACTCTGACTCTTTTATCT
rJMSF038O20+ G-TTTTTTTTTTCTTTCTGAAGTTTGTGTATTTGGGTTTAGTACTCTGACTCTTTTATCT
                      ____________________________________________________________
consensus GTTTTTTTTTTTCTTTCTGAAGTTTGTGTATTTGGGTTTAGTACTCTGACTCTTTTATCT
 
. : . : . : . : . : . :
rJMFF017G11+ CTGTGTTGGTGAGAGGTTGTATTTCAGTTGTGTCATA
rJMSF032N21+ CTGTGTTGGTGAGAGGT
rJMSF004P16+ CTGTGTTGGNGAGAGGTTGTATTTCAGTTGTGTCATA
JMFN033H15- CTGTGTTGGTGAGAGGTTGTATTTCAGTTGTGTCATA
rJMSF038O20+ CTGTGTTGGTGAGAGGTTGTATTTCAGTTGTGTCATAAGAGGCCATATTGAACTAATTCA
                      ____________________________________________________________
consensus CTGTGTTGGTGAGAGGTTGTATTTCAGTTGTGTCATAAGAGGCCATATTGAACTAATTCA