| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF007E09 | Sequence | 467 | 016694 | ref|XP_011080691.1| | 7e-85 | PREDICTED: sodium-dependent phosphate transport protein 1, chloroplastic [Sesam | 773 | 001439 (3) | ref|XP_009777113.1| | 2e-84 | PREDICTED: probable anion transporter 1, chloroplastic [Nicotiana sylvestris] |
| JMSF037G24 | Sequence | 684 | 000889 (2) | ref|XP_009631060.1| | 2e-63 | PREDICTED: sodium-dependent phosphate transport protein 1, chloroplastic [Nicot | 663 | 001439 (3) | ref|XP_009777113.1| | 9e-52 | PREDICTED: probable anion transporter 1, chloroplastic [Nicotiana sylvestris] |
| JMSF038G24 | Sequence | 583 | 000889 (2) | ref|XP_009631060.1| | 5e-44 | PREDICTED: sodium-dependent phosphate transport protein 1, chloroplastic [Nicot | 822 | 001439 (3) | ref|XP_009777113.1| | 1e-67 | PREDICTED: probable anion transporter 1, chloroplastic [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
rJMSF007E09+ CAGATTCATTAGTGAGGA
rJMSF038G24+ TGCATATGCTGGAGGATGGATTTGCAGATTCATTAGTGAGGA
____________________________________________________________
consensus TGCATATGCTGGAGGATGGATTTGCAGATTCATTAGTGAGGA
. : . : . : . : . : . :
rJMSF007E09+ AAGGTGTATCAGTGACGGTAGTCAGGAAGATAATGCAGACAATAGGG--TTTCTTGGCCC
rJMSF038G24+ AAGGTGTATCAGTGACGGTAGTCAGGAAGATAANGCAGACAATAGGGGTTTCTTGGNCCC
____________________________________________________________
consensus AAGGTGTATCAGTGACGGTAGTCAGGAAGATAATGCAGACAATAGGGGTTTTTTTGGCCC
. : . : . : . : . : . :
rJMSF007E09+ TGCTTTCTTTCTAACTCAATTGAGCCATGTTGATTCTCCTGCAATGGCAGTCCTGTGCAT
rJMSF037G24+ TGCAT
rJMSF038G24+ TGCTTTCTTTCTAACTCAATTGAGCCATGTTGATTCTCCTGCAATGGCAGTCCTGTGCAT
____________________________________________________________
consensus TGCTTTCTTTCTAACTCAATTGAGCCATGTTGATTCTCCTGCAATGGCAGTCCTGTGCAT
. : . : . : . : . : . :
rJMSF007E09+ GACATGCAGTCAGGGAAGTGATGCTTTTTCACAGTCTGGATTATATTCAAACCATCAGGA
rJMSF037G24+ GACATGCAGTCAGGGAAGTGATGCTTTTTCACAGTCTGGATTATATTCAAACCATCAGGA
rJMSF038G24+ GACATGCAGTCAGGGAAGTGATGCTTTTTCACAGTNTGGATTATATTCAAACCATCAGGA
____________________________________________________________
consensus GACATGCAGTCAGGGAAGTGATGCTTTTTCACAGTCTGGATTATATTCAAACCATCAGGA
. : . : . : . : . : . :
rJMSF007E09+ TATTGCTCCCCGATACTCGGGAGTGCTAATGGGTCTATCAAATACTGCTGGAGTGCTGGC
rJMSF037G24+ TATTGCTCCCCGATACTCGGGAGTGCTAATGGGTCTATCAAATACTGCTGGAGTGCTGGC
rJMSF038G24+ TATTGCTCCCCGATACTCGGGAGTGCTAATGGGTCTATCAAATACTGCTGGAGTGCTGGC
____________________________________________________________
consensus TATTGCTCCCCGATACTCGGGAGTGCTAATGGGTCTATCAAATACTGCTGGAGTGCTGGC
. : . : . : . : . : . :
rJMSF007E09+ TGGTGTTTTTGGAACTGCAGCCACTGGTTACATCCTGCAACATGGTTCTTGGGATGACGT
rJMSF037G24+ TGGTGTTTTTGGAACTGCAGCCACTGGTTACATCCTGCAACATGGTTCTTGGGATGACGT
rJMSF038G24+ NGGTGTTTTTGGAACTGCAGCCACTGGTTACATCCTGCAACATGGTTCTTGGGATGACGT
____________________________________________________________
consensus TGGTGTTTTTGGAACTGCAGCCACTGGTTACATCCTGCAACATGGTTCTTGGGATGACGT
. : . : . : . : . : . :
rJMSF007E09+ TTTTAAGGTTTCAGTGGGGCTATACTTAGTTGGAACCGTGGTATGGAATCTCTTTTCAAC
rJMSF037G24+ TTTTAAGGTTTCAGTGGGGCTATACTTAGTTGGAACCGTGGTATGGAATCTCTTTTCAAC
rJMSF038G24+ TTTTAAGGTTTCAGTGGGGCTATACTTAGTTGGAACCGTGGTATGGAATCTCTTTTCAAC
____________________________________________________________
consensus TTTTAAGGTTTCAGTGGGGCTATACTTAGTTGGAACCGTGGTATGGAATCTCTTTTCAAC
. : . : . : . : . : . :
rJMSF007E09+ TGGAGAGAAGATCTTGGACTGAGCGGGCCTCATTTCCGTGTAAGACCATATGATGTAACA
rJMSF037G24+ TGGAGAGAAGATCTTGGACTGAGCGGGCCTCATTTCCGTGTAAGACCATATGATGTAACA
rJMSF038G24+ TGGAGAGANGATCTTGGACTGAGCGGGCCTCATTTCCGTGTAAGACCATATGATGTAACA
____________________________________________________________
consensus TGGAGAGAAGATCTTGGACTGAGCGGGCCTCATTTCCGTGTAAGACCATATGATGTAACA
. : . : . : . : . : . :
rJMSF007E09+ ACTCCGCCCTGCCCTCCGATCTTAAGAACCAGATGTATATAAGAGCAACCGGAAGAGTGG
rJMSF037G24+ ACTCCGCCCTGCCCTCCGATCTTAAGAACCAGATGTATATAAGAGCAACCGGAAGAGTGG
rJMSF038G24+ ACTCCGCCCTGCCCTCCGATCTTAAGANCCAGATGTATATAAGAGCANCCGGAAGAGTGG
____________________________________________________________
consensus ACTCCGCCCTGCCCTCCGATCTTAAGAACCAGATGTATATAAGAGCAACCGGAAGAGTGG
. : . : . : . : . : . :
rJMSF007E09+ AATCAAGTTCATACTATATTTCACTAGGAATAGGTAGAAATTCTGGGCCTGCACAGCAGA
rJMSF037G24+ AATCAAGTTCATACTATATTTCACTAGGAATAGGTAGAAATTCTGGGCCTGCACAGCAGA
rJMSF038G24+ AATCAAGTTCATACTATATTTCACTAGGAATAGGTAGAAATTCTGGGCCTNCACAGCAGA
____________________________________________________________
consensus AATCAAGTTCATACTATATTTCACTAGGAATAGGTAGAAATTCTGGGCCTGCACAGCAGA
. : . : . : . : . : . :
rJMSF007E09+ AAAGTGAACAAATTCTTTGGAATTGTATAGATTGGATGAATAGAGGTGAGGATTTCCACG
rJMSF037G24+ AAAGTGAACAAATTCTTTGGAATTGTATAGATTGGATGAATAGAGGTGAGGATTTCCACG
rJMSF038G24+ AAAGTGAACAAATTCTTTGGAATNGTATAGATTGGATGAATAGAGGTGAGGATTTCCACG
____________________________________________________________
consensus AAAGTGAACAAATTCTTTGGAATTGTATAGATTGGATGAATAGAGGTGAGGATTTCCACG
. : . : . : . : . : . :
rJMSF007E09+ AGGATTCCAACACCATTGATTAACCAATGGGATATAAGAAAGAAGGGGAGTCAGATTGAG
rJMSF037G24+ AGGATTCCAACACCATTGATTAACCAATGGGATATAAGAAAGAAGGGGAGTCAGAGTGAG
rJMSF038G24+ AGGATTCCAACACCATTGATTAACCAATGNGATATAAGAAAGAAGGGGAGTCAGAGTGAG
____________________________________________________________
consensus AGGATTCCAACACCATTGATTAACCAATGGGATATAAGAAAGAAGGGGAGTCAGAGTGAG
. : . : . : . : . : . :
rJMSF007E09+ CAACATAACATCAGAATCGCATTGTTGTATATTTCTGTGAAGTAACTAAATTTTGGTTAG
rJMSF037G24+ CAACATAACATCAGAATCGCATTGTTGTATATTTCTGTGAAGTAACTAAATTTTGGTTAG
rJMSF038G24+ CAACATAACATCAGAATCGCATTGTTGTATATTTCTGTGAAGTAACTAAATTTTGGTTAG
____________________________________________________________
consensus CAACATAACATCAGAATCGCATTGTTGTATATTTCTGTGAAGTAACTAAATTTTGGTTAG
. : . : . : . : . : . :
rJMSF007E09+ TGTTTCTCATATACAGCTAAAAAC
rJMSF037G24+ TGTTTCTCATATACAGCTAAAAACTGT-CATGTTTGAACCTCTATTGTATATAGAATTA
rJMSF038G24+ TGTTTCTCATATACAGCTAAAAACTGTGCATGTTTGAACCTCTATTGTATATAGAATTAT
____________________________________________________________
consensus TGTTTCTCATATACAGCTAAAAACTGTGCATGTTTGAACCTCTATTGTATATAGAATTAT