Contig 001433:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF037G15-                                                       GAGTGAGTCTGATGCC
rJMSF037G15+                                                           AGTCTGATGCC
                      ____________________________________________________________
consensus                                                         GAGTGAGTCTGATGCC
 
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JMSF037G15-           CCCGAGGAGTTCACTTCTTTACAGGGCATCGAGCAGGACGAGGAGATAAGAAAAGTTGAA
rJMSF037G15+          CCCGAGGAGTTCACTTCTTTACAGGGCATCGAGCAGGACGAGGAGATAAGAAAAGTTGAA
                      ____________________________________________________________
consensus             CCCGAGGAGTTCACTTCTTTACAGGGCATCGAGCAGGACGAGGAGATAAGAAAAGTTGAA
 
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JMSF037G15-           AGAGAGAACAAGGCCAGAATTGTTCGCGAAGCAAGAGAGCGGCGCAGAAAATGGGCTGAG
rJMSF037G15+          AGAGAGAACAAGGCCAGAATTGTTCGCGAAGCAAGAGAGCGGCGCAGAAAATGGGCTGAG
                      ____________________________________________________________
consensus             AGAGAGAACAAGGCCAGAATTGTTCGCGAAGCAAGAGAGCGGCGCAGAAAATGGGCTGAG
 
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JMSF037G15-           AAGTTAACTCCACGGCCCACACTTGATGATGAAAGCATAGAAGATGCAACAGAATCCGAA
rJMSF037G15+          AAGTTAACTCCACGGCCCACACTTGATGATGAAAGCATAGAAGATGCAACAGAATCCGAA
                      ____________________________________________________________
consensus             AAGTTAACTCCACGGCCCACACTTGATGATGAAAGCATAGAAGATGCAACAGAATCCGAA
 
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JMSF037G15-           CAGCCTCGGGAGTCCAAGGATACTAGAGGAATGTTGCCAGATAACATTGTACAACTGCTG
rJMSF037G15+          CAGCCTCGGGAGTCCAAGGATACTAGAGGAATGTTGCCAGATAACATTGTACAACTGCTG
                      ____________________________________________________________
consensus             CAGCCTCGGGAGTCCAAGGATACTAGAGGAATGTTGCCAGATAACATTGTACAACTGCTG
 
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JMSF037G15-           GCGGCTCGTGAGAAGTGAGTAAATTTGCTCTGTTAGATGTGCATTAGAAACTCTTTCTCA
rJMSF037G15+          GCGGCTCGTGAGAAGTGAGTAAATTTGCTCTGTTAGATGTGCATTAGAAACTCTTTCTCA
                      ____________________________________________________________
consensus             GCGGCTCGTGAGAAGTGAGTAAATTTGCTCTGTTAGATGTGCATTAGAAACTCTTTCTCA
 
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JMSF037G15-           CTTCTTAGTAGTTGGTAAGGAGGAAAGATTCATTTCTCCTGCAGGAAAGTTTTCTCATCG
rJMSF037G15+          CTTCTTAGTAGTTGGTAAGGAGGAAAGATTCATTTCTCCTGCAGGAAAGTTTTCTCATCG
                      ____________________________________________________________
consensus             CTTCTTAGTAGTTGGTAAGGAGGAAAGATTCATTTCTCCTGCAGGAAAGTTTTCTCATCG
 
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JMSF037G15-           GACTCAGAGGATGAGGAACCTAAGAAAAGTGCGAGCTCCAAAAAGAAAAGGCCGAAGAAA
rJMSF037G15+          GACTCAGAGGATGAGGAACCTAAGAAAAGTGCGAGCTCCAAAAAGAAAAGGCCGAAGAAA
                      ____________________________________________________________
consensus             GACTCAGAGGATGAGGAACCTAAGAAAAGTGCGAGCTCCAAAAAGAAAAGGCCGAAGAAA
 
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JMSF037G15-           TCCGGGCTAGAAGCGGTTATTCTGAATGAGATACCACCTCCCCAGTGCTTAGAGAACTCA
rJMSF037G15+          TCCGGGCTAGAAGCGGTTATTCTGAATGAGATACCACCTCCCCAGTGCTTAGAGAACTCA
                      ____________________________________________________________
consensus             TCCGGGCTAGAAGCGGTTATTCTGAATGAGATACCACCTCCCCAGTGCTTAGAGAACTCA
 
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JMSF037G15-           CTCGATTTCTTGAAGAAACGGAAGATGCAAGTTTCCAGATCATCTGCTGTTTTGAATAAT
rJMSF037G15+          CTCGATTTCTTGAAGAAACGGAAGATGCAAGTTTCCAGATCATCTGCTGTTTTGAATAAT
                      ____________________________________________________________
consensus             CTCGATTTCTTGAAGAAACGGAAGATGCAAGTTTCCAGATCATCTGCTGTTTTGAATAAT
 
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JMSF037G15-           TCTACTCAAGCATTGCGCCTTCTTTCTAAAACCGGCTTGTTATGACTGCCAATTCATCTG
rJMSF037G15+          TCTACTCAAGCATTGCGCCTTCTTTCTAAAACCGGCTTGTTATGACTGCCAATTCATCTG
                      ____________________________________________________________
consensus             TCTACTCAAGCATTGCGCCTTCTTTCTAAAACCGGCTTGTTATGACTGCCAATTCATCTG
 
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JMSF037G15-           TTATATTGGCNATGTTCTGTTGAGTTGTGTTTTGCCATTTTAGTGCCNATTGAATTATTA
rJMSF037G15+          TTATATTGGCAATGTTCTGTTGAGTTGTGTTTTGCCATTTTAGTGCCAATTGAATTATTA
                      ____________________________________________________________
consensus             TTATATTGGCAATGTTCTGTTGAGTTGTGTTTTGCCATTTTAGTGCCAATTGAATTATTA
 
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JMSF037G15-           TAATTAAGC                                                   
rJMSF037G15+          TAATTAAGCATTCATGCCCTTTGAAAAAATTACTATTCTCTCCCTTCAACCAGGAATTTG
                      ____________________________________________________________
consensus             TAATTAAGCATTCATGCCCTTTGAAAAAATTACTATTCTCTCCCTTCAACCAGGAATTTG