Contig 001427:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF022C05Sequence606000467 (10)ref|XP_006341679.1|98.6PREDICTED: uncharacterized protein LOC102589286 [Solanum tuberosum]766001427 (6)ref|XP_009786426.1|1e-99PREDICTED: uncharacterized protein LOC104234548 isoform X1 [Nicotiana sylvestri
JMSF023H22Sequence580000467 (10)ref|XP_006341679.1|92.8PREDICTED: uncharacterized protein LOC102589286 [Solanum tuberosum]803001427 (6)ref|XP_009786426.1|2e-105PREDICTED: uncharacterized protein LOC104234548 isoform X1 [Nicotiana sylvestri
JMSF036C22Sequence633000467 (10)ref|XP_006341679.1|93.6PREDICTED: uncharacterized protein LOC102589286 [Solanum tuberosum]682001427 (6)ref|XP_009786426.1|4e-52PREDICTED: uncharacterized protein LOC104234548 isoform X1 [Nicotiana sylvestri
JMSF038G05Sequence628000467 (10)ref|XP_006341679.1|93.6PREDICTED: uncharacterized protein LOC102589286 [Solanum tuberosum]944001427 (6)ref|XP_009786426.1|7e-129PREDICTED: uncharacterized protein LOC104234548 isoform X1 [Nicotiana sylvestri
JMSF043J02Sequence756000467 (10)ref|XP_006341679.1|94.0PREDICTED: uncharacterized protein LOC102589286 [Solanum tuberosum]810001427 (6)ref|XP_009786426.1|4e-112PREDICTED: uncharacterized protein LOC104234548 isoform X1 [Nicotiana sylvestri
JMSF052I12Sequence612000467 (10)ref|XP_006341679.1|98.6PREDICTED: uncharacterized protein LOC102589286 [Solanum tuberosum]936001427 (6)ref|XP_009786426.1|1e-132PREDICTED: uncharacterized protein LOC104234548 isoform X1 [Nicotiana sylvestri

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF052I12+ CCAAAATTAAAATCACTTGTTGAGTCGATGGCTAGAATGTGGGAGACCATGAAGGGA
rJMSF038G05+ GTCGATGGCTAGAATGTGGGAGACCATGAAGGGA
                      ____________________________________________________________
consensus CCAAAATTAAAATCACTTGTTGAGTCGATGGCTAGAATGTGGGAGACCATGAAGGGA
 
. : . : . : . : . : . :
rJMSF052I12+ CATCATGAGAATCAATGTCAGATCGTGCTAGCTCTGAGGTCTCTGGATATGTCGCAGTCC
rJMSF038G05+ CATCATGAGAATCAATGTCAGATCGTGCTAGCTCTGAGGTCTCTGGATATGTCGCAGTCC
                      ____________________________________________________________
consensus CATCATGAGAATCAATGTCAGATCGTGCTAGCTCTGAGGTCTCTGGATATGTCGCAGTCC
 
. : . : . : . : . : . :
rJMSF052I12+ CCCAAAGAAACAAGTGAGCACCACTATGAACGCACTTACCAGTTAGGTGTTGTTGTACAA
rJMSF043J02+ CCCAAAGAAACAAGTGAGCACCACTATGAACGCACTTACCAGTTAGGTGTTGTTGTACAA
rJMSF023H22+ TATGAACGCACTTACCAGTTAGGTGTTGTTGTACAA
rJMSF038G05+ CCCAAAGAAACAAGTGAGCACCACTATGAACGCACTTACCAGTTAGGTGTTGTTGTACAA
                      ____________________________________________________________
consensus CCCAAAGAAACAAGTGAGCACCACTATGAACGCACTTACCAGTTAGGTGTTGTTGTACAA
 
. : . : . : . : . : . :
rJMSF052I12+ GAGTGGCATTCACAGTTTGAGAAAATGATAATCCACCAGAAGGAATATATTAGAGGCCTG
rJMSF043J02+ GAGTGGCATTCACAGTTTGAGAAAATGATAATCCACCAGAAGGAATATATTAGAGGCCTG
rJMSF023H22+ GAGTGGCATTCACAGNTTGAGAAAATGATAATCCACCAGAAGGAATATATTAGAGGCCTG
rJMSF022C05+ GAGTGGCATTCACAGTTTGAGAAAATGATAATCCACCAGAAGGAATATATTAGAGGCCTG
rJMSF038G05+ GAGTGGCATTCACAGTTTGAGAAAATGATAATCCACCAGAAGGAATATATTAGAGGCCTG
                      ____________________________________________________________
consensus GAGTGGCATTCACAGTTTGAGAAAATGATAATCCACCAGAAGGAATATATTAGAGGCCTG
 
. : . : . : . : . : . :
rJMSF052I12+ AACGATTGGTTGAAGCTAAATCTGGTTCCTATTGATACAAATCTGAAGGAAAAGGTTTCA
rJMSF043J02+ AACGATTGGTTGAAGCTAAATCTGGTTCCTATTGATACAAATCTGAAGGAAAAGGTTTCA
rJMSF023H22+ AACGATTGGTTGAAGCTAAATCTGGTTCCTATTGATACAAATCTGAAGGAAAAGGTTTCA
rJMSF022C05+ AACGATTGGTTGAAGCTAAATCTGGTTCCTATTGATACAAATCTGAAGGAAAAGGTTTCA
rJMSF038G05+ AACGATTGGTTGAAGCTAAATCTGGTTCCTATTGATACAAATCTGAAGGAAAAGGTTTCA
                      ____________________________________________________________
consensus AACGATTGGTTGAAGCTAAATCTGGTTCCTATTGATACAAATCTGAAGGAAAAGGTTTCA
 
. : . : . : . : . : . :
rJMSF052I12+ TCCCCACAAAGGCCCCAGAACCCTCCAATTCTTGCACTTCTGCATGCCTGGCAAGATCTG
rJMSF043J02+ TCCCCACAAAGGCCCCAGAACCCTCCAATTCTTGCACTTCTGCATGCCTGGCAAGATCTG
rJMSF023H22+ TCCCCACAAAGGCCCCAGAACCCTCCAATTCTTGCACTTCTGCATGCCTGGCAAGATCTG
rJMSF022C05+ TCCCCACAAAGGCCCCAGAACCCTCCAATTCTTGCACTTCTGCATGCCTGGCAAGATCTG
rJMSF038G05+ TCCCCACAAAGGCCCCAGAACCCTCCAATTCTTGCACTTCTGCATGCCTGGCAAGATCTG
rJMSF036C22+ TGCATGCCTGGCAAGATCTG
                      ____________________________________________________________
consensus TCCCCACAAAGGCCCCAGAACCCTCCAATTCTTGCACTTCTGCATGCCTGGCAAGATCTG
 
. : . : . : . : . : . :
rJMSF052I12+ ATTGGGAAGCTTCCTGATGAGCTTGCTAAAACCGCTATTTATAGC-TTTTCTGCTGTTGT
rJMSF043J02+ ATTGGGAAGCTTCCTGATGAGCTTGCTAAAACCGCTATTTATAGC-TTTTCTGCTGTTGT
rJMSF023H22+ ATTGGGAAGCTTCCTGATGAGCTTGCTAAAACCGCTATTTATAGC-TTTTCTGCTGTTGT
rJMSF022C05+ ATTGGGAAGCTTCCTGATGAGCTTGCTAAAACCGCTATTTATAGC-TTTTCTGCTGTTGT
rJMSF038G05+ ATTGGGAAGCTTCCTGATGAGCTTGCTAAAACCGCTATTTATAGC-TTTTCTGCTGTTGT
rJMSF036C22+ ATTGGGAAGCTTCCTGATGAGCTTGCTAAAACCGCTATTTATAGCTTTTTCTGCTGTTGT
                      ____________________________________________________________
consensus ATTGGGAAGCTTCCTGATGAGCTTGCTAAAACCGCTATTTATAGC-TTTTCTGCTGTTGT
 
. : . : . : . : . : . :
rJMSF052I12+ AAATACCATCGTGCAACATCAACTAGATGAGATGAAATTGAAGGACAGGTGTAAGGATAC
rJMSF043J02+ AAATACCATCGTGCAACATCAACTAGATGAGATGAAATTGAAGGACAGGTGTAAGGATAC
rJMSF023H22+ AAATACCATCGTGCAACATCAACTAGATGAGATGAAATTGAAGGACAGGTGTAAGGATAC
rJMSF022C05+ AAATACCATCGTGCAACATCAACTAGATGAGATGAAATTGAAGGACAGGTGTAAGGATAC
rJMSF038G05+ AAATACCATCGTGCAACATCAACTAGATGAGATGAAATTGAAGGACAGGTGTAAGGATAC
rJMSF036C22+ AAATACCATCGTGCAACATCAACTAGATGAGATGAAATTGAAGGACAGGTGTAAGGATAC
                      ____________________________________________________________
consensus AAATACCATCGTGCAACATCAACTAGATGAGATGAAATTGAAGGACAGGTGTAAGGATAC
 
. : . : . : . : . : . :
rJMSF052I12+ AAGAAAGGAGCTTGAAAAGAGGACCAGGCAATTTGAGGACTGGTATCATAAGTATATGCA
rJMSF043J02+ AAGAAAGGAGCTTGAAAAGAGGACCAGGAAATTTGAGGACTGGTATCATAAGTATATGCA
rJMSF023H22+ AAGAAAGGAGCTTGAAAAGAGGACCAGGCAATTTGAGGACTGGTATCATAAGTATATGCA
rJMSF022C05+ AAGAAAGGAGCTTGAAAAGAGGACCAGGCAATTTGAGGACTGGTATCATAAGTATATGCA
rJMSF038G05+ AAGAAAGGAGCTTGAAAAGAGGACCAGGCAATTTGAGGACTGGTATCATAAGTATATGCA
rJMSF036C22+ AAGAAAGGAGCTTGAAAAGAGGACCAGGCAATTTGAGGACTGGTATCATAAGTATATGCA
                      ____________________________________________________________
consensus AAGAAAGGAGCTTGAAAAGAGGACCAGGCAATTTGAGGACTGGTATCATAAGTATATGCA
 
. : . : . : . : . : . :
rJMSF052I12+ ACGGAGAACTCCAAACGATGACACAGAACAAGATGGACCTCACGAGGATAACAATGTAAT
rJMSF043J02+ ACGGAGAACTCCAAACGATGACACAGAACAAGATGGACCTCACGAGGATAACAATGTAAT
rJMSF023H22+ ACGGAGAACTCCAAACGATGACACAGAACAAGATGGACCTCACGAGGATAACAATGTAAT
rJMSF022C05+ ACGGAGAACTCCAAACGATGACACAGAACAAGATGGACCTCACGAGGATAACAATGTAAT
rJMSF038G05+ ACGGAGAACTCCAAACGATGACACAGAACAAGATGGACCTCACGAGGATAACAATGTAAT
rJMSF036C22+ ACGGAGAACTCCAAACGATGACACAGAACAAGATGGACCTCACGAGGATAACAATGTAAT
                      ____________________________________________________________
consensus ACGGAGAACTCCAAACGATGACACAGAACAAGATGGACCTCACGAGGATAACAATGTAAT
 
. : . : . : . : . : . :
rJMSF052I12+ CGAGCGACAACTACAACTAGAAGCACTGAAGCAGAGGTTGAAAGAGGAGGAGGAGGCCTA
rJMSF043J02+ CGAGCGACAACTACAACTAGAAGCACTGAAGCAGAGGTTGAAAGAGGAGGAGGAGGCCTA
rJMSF023H22+ CGAGCGACAACTACAACTAGAAGCACTGAAGCAGAGGTTGAAAGAGGAGGAGGAGGCCTA
rJMSF022C05+ CGAGCGACAACTACAACTAGAAGCACTGAAGCAGAGGTTGAAAGAGGAGGAGGAGGCCTA
rJMSF038G05+ CGAGCGACAACTACAACTAGAAGCACTGAAGCAGAGGTTGAAAGAGGAGGAGGAGGCCTA
rJMSF036C22+ CGAGCGACAACTACAACTAGAAGCACTGAAGCAGAGGTTGAAAGAGGAGGAGGAGGCCTA
                      ____________________________________________________________
consensus CGAGCGACAACTACAACTAGAAGCACTGAAGCAGAGGTTGAAAGAGGAGGAGGAGGCCTA
 
. : . : . : . : . : . :
rJMSF052I12+ CATGAGGCAGTGTATGCAGGTCAGAGTGAAGTCACTGACTAGTTTAAGAACAGGCCTTCC
rJMSF043J02+ CATGAGGCAGTGTATGCAGGTCAGAGTGAAGTCACTGACTAGTTTAAGAACAGGCCTTCC
rJMSF023H22+ CATGAGGCAGTGTATGCAGGTCAGAGTGAAGTCACTGACTAGTTTAAGAACAGGCCTTCC
rJMSF022C05+ CATGATGCAGTGTATGCAGGTCAGAGTGAAGTCACTGACTAGTTTAAGAACAGGCCTTCC
rJMSF038G05+ CATGAGGCAGTGTATGCAGGTCAGAGTGAAGTCACTGACTAGTTTAAGAACAGGCCTTCC
rJMSF036C22+ CATGAGGCAGTGTATGCAGGTCAGAGTGAAGTCACTGACTAGTTTAAGAACAGGCCTTCC
                      ____________________________________________________________
consensus CATGAGGCAGTGTATGCAGGTCAGAGTGAAGTCACTGACTAGTTTAAGAACAGGCCTTCC
 
. : . : . : . : . : . :
rJMSF052I12+ CGAACTTTTTCATGCAATGTCAGAATTTTCTCGTGCTTGTTCGATTATGTACCAGACTTT
rJMSF043J02+ CGAACTTTTTCATGCAATGTCAGAATTTTCTCGTGCTTGTTCGATTATGTACCAGACTTT
rJMSF023H22+ CGAACTTTTTCATGCAATGTCAGAATTTTCTCGTGCTTGTTCGATTATGTACCAGACTTT
rJMSF022C05+ CGAACTTTTTCATGCAATGTCAGAATTTTCTCGTGCTTGTTCGATTATGTACCAGACTTT
rJMSF038G05+ CGAACTTTTTCATGCAATGTCAGAATTTTCTCGTGCTTGTTCGATTATGTACCAGACTTT
rJMSF036C22+ CGAACTTTTTCATGCAATGTCAGAATTTTCTCGTGCTTGTTCGATTATGTACCAGACTTT
                      ____________________________________________________________
consensus CGAACTTTTTCATGCAATGTCAGAATTTTCTCGTGCTTGTTCGATTATGTACCAGACTTT
 
. : . : . : . : . : . :
rJMSF052I12+ GGAGTCCATCACACATCCGCTTAACAGAGAGAGCACATAACCGGGTAATGTTTGGCCTCA
rJMSF043J02+ GGAGTCCATCACACATCCGCTTAACAGAGAGAGCACATAACCGGGTAATGTTTGGCCTCA
rJMSF023H22+ GGAGTCCATCACACATCCGCTTAACAGAGAGAGCACATAACCGGGTAATGTTTGGCCTCA
rJMSF022C05+ GGAGTCCATCACACATCCGCTTAACAGAGAGAGCACATAACCGGGTAATGTTTGGCCTCA
rJMSF038G05+ GGAGTCCATCACACATCCGCTTAACAGAGAGAGCACATAACCGGGTAATGTTTGGCCTCA
rJMSF036C22+ GGAGTCCATCACACATCCGCTTAACAGAGAGAGCACATAACCGGGTAATGTTTGGCCTCA
                      ____________________________________________________________
consensus GGAGTCCATCACACATCCGCTTAACAGAGAGAGCACATAACCGGGTAATGTTTGGCCTCA
 
. : . : . : . : . : . :
rJMSF052I12+ CAAGATTTTGCGTTGTTCATAATTTACTCAGAATACATTACATTACATTGTATTGTGTTC
rJMSF043J02+ CAAGATTTTGCGTTGTTCATAATTTACTCAGAATACATTACATTACATTGTATTGTGTTC
rJMSF023H22+ CAAGATTTTGCGTTGTTCATAATTTACTCAGAATACATTACATTACATTGTATTGTGTTC
rJMSF022C05+ CAAGATTTTGCGTTGTTCATAATTTACTCAGAATACATTACATTACATTGTATTGTGTTC
rJMSF038G05+ CAAGATTTTGCGTTGTTCATAATTTACTCAGAATACATTACATTACATTGTATTGTGTTC
rJMSF036C22+ CAAGATTTTGCGTTGTTCATAATTTACTCAGAATACATTACATTACATTGTATTGTGTTC
                      ____________________________________________________________
consensus CAAGATTTTGCGTTGTTCATAATTTACTCAGAATACATTACATTACATTGTATTGTGTTC
 
. : . : . : . : . : . :
rJMSF052I12+ TGTCATTTTGTGTGCTGAGAAACCCAAAAA
rJMSF043J02+ TGTCATTTTGTGTGCTGAGAAACCCAAAAAC
rJMSF023H22+ TGTCATTTTGTGTGCTGAGAAACCCAAAAAC
rJMSF022C05+ TGTCATTTTGTGTGCTGAGAAACCCAAAAAC
rJMSF038G05+ TGTCATTTTGTGTGCTGAGAAACCCAAAAACAATGTGATGTGATATTTTACTATGTAATT
rJMSF036C22+ TGTCATTTTGTGTGCTGAGAAACCCAAAAACAATGTGATGTGATATTTTACTATGTAATT
                      ____________________________________________________________
consensus TGTCATTTTGTGTGCTGAGAAACCCAAAAACAATGTGATGTGATATTTTACTATGTAATT
 
. : . : . : . : . : . :
rJMSF038G05+ TTC
rJMSF036C22+ TTCAATAGTCAACATGGTACTGAGTTCCTTGAATGAACTTTTCATTTCTCAAGTGCTCTG
                      ____________________________________________________________
consensus TTCAATAGTCAACATGGTACTGAGTTCCTTGAATGAACTTTTCATTTCTCAAGTGCTCTG