| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF012A11 | Sequence | 511 | 006676 (7) | 725 | 001416 (7) | ref|XP_002310798.2| | 7e-96 | hypothetical protein POPTR_0007s12510g [Populus trichocarpa] gb|EEE91248.2| hypo | |||
| JMSF025G06 | Sequence | 640 | 006676 (7) | emb|CDP02816.1| | 5e-10 | unnamed protein product [Coffea canephora] | 761 | 001416 (7) | ref|XP_011025730.1| | 3e-96 | PREDICTED: probable protein phosphatase 2C 80 [Populus euphratica] ref|XP_011025 |
| JMSF030E17 | Sequence | 666 | 006676 (7) | emb|CDP02816.1| | 1e-12 | unnamed protein product [Coffea canephora] | 738 | 001416 (7) | ref|XP_002310798.2| | 1e-96 | hypothetical protein POPTR_0007s12510g [Populus trichocarpa] gb|EEE91248.2| hypo |
| JMSF032K06 | Sequence | 685 | 006676 (7) | emb|CDP02816.1| | 1e-12 | unnamed protein product [Coffea canephora] | 725 | 001416 (7) | ref|XP_002310798.2| | 9e-97 | hypothetical protein POPTR_0007s12510g [Populus trichocarpa] gb|EEE91248.2| hypo |
| JMSF033K06 | Sequence | 638 | 006676 (7) | emb|CDP02816.1| | 1e-12 | unnamed protein product [Coffea canephora] | 510 | 001416 (7) | ref|XP_011025730.1| | 2e-69 | PREDICTED: probable protein phosphatase 2C 80 [Populus euphratica] ref|XP_011025 |
| JMSF041K10 | Sequence | 727 | 006676 (7) | emb|CDP02816.1| | 1e-12 | unnamed protein product [Coffea canephora] | 803 | 001416 (7) | ref|XP_002310798.2| | 8e-100 | hypothetical protein POPTR_0007s12510g [Populus trichocarpa] gb|EEE91248.2| hypo |
| JMSF043B08 | Sequence | 545 | 006676 (7) | 714 | 001416 (7) | ref|XP_002310798.2| | 8e-97 | hypothetical protein POPTR_0007s12510g [Populus trichocarpa] gb|EEE91248.2| hypo | |||
This contig is upended
. : . : . : . : . : . :
rJMSF041K10+ TTGTGCTAGTTTCTGGATCATGCTACCTTCCTCATCCGGNTAAAGT
____________________________________________________________
consensus TTGTGCTAGTTTCTGGATCATGCTACCTTCCTCATCCGGNTAAAGT
. : . : . : . : . : . :
rJMSF041K10+ GGAAAACTGGTGGAGAGGATGCTCATTTCATTTGTGCAGATGAGCAAGCAGTCGGTGTAG
rJMSF030E17+ TTCATTTGTGCAGATGAGCAAGCAGTCGGTGTAG
rJMSF043B08+ GTGTAG
rJMFF012A11+ TTGTGCAGATGAGCAAGCAGTCGGTGTAG
rJMSF025G06+ TGGAGAGGATGCTCA-TTTCATTGTGCAGATGAGCAAGCAGTCGGTGTAG
rJMSF032K06+ TGTAG
____________________________________________________________
consensus GGAAAACTGGTGGAGAGGATGCTCATTTCATTTGTGCAGATGAGCAAGCAGTCGGTGTAG
. : . : . : . : . : . :
rJMSF041K10+ CAGATGGAGTGGGTGGATGGGCAGATGTTGGCATTAATGCAGGAGATTATGCACGCGAAC
rJMSF030E17+ CAGATGGAGTGGGTGGATGGGCAGATGTTGGCATTAATGCAGGAGATTATGCACGCGAAC
rJMSF043B08+ CAGATGGAGTGGGTGGATGGGCAGATGTTGGCATTAATGCAGGAGATTATGCACGCGAAC
rJMFF012A11+ CAGATGGAGTGGGTGGATGGGCAGATGTTGNCATTAATGCAGGAGATTATGCACGCGAAC
rJMSF025G06+ CAGATGGAGTGGGTGGATGGGCAGATGTTGGCATTAATGCAGGAGATTATGCACGCGAAC
rJMSF032K06+ CAGATGGAGTGGGTGGATGGGCAGATGTTGGCATTAATGCAGGAGATTATGCACGCGAAC
____________________________________________________________
consensus CAGATGGAGTGGGTGGATGGGCAGATGTTGGCATTAATGCAGGAGATTATGCACGCGAAC
. : . : . : . : . : . :
rJMSF041K10+ TAATGTATTATTCAATGGATGCTATTCTTCATGAACCCAAAGATTCCATTGATCCTGCTC
rJMSF030E17+ TAATGTATTATTCAATGGATGCTATTCTTCATGAACCCAAAGATTCCATTGATCCTGCTC
rJMSF043B08+ TAATGTATTATTCAATGGATGCTATTCTTCATGAACCCAAAGATTCCATTGATCCTGCTC
rJMFF012A11+ TAATGTATTATTCAATGGATGCTATTCTTCATGAACCCAAAGATTCCATTGATCCTGCTC
rJMSF025G06+ TAATGTATTATTCAATGGATGCTATTCTTCATGAACCCAAAGATTCCATTGATCCTGCTC
rJMSF032K06+ TAATGTATTATTCAATGGATGCTATTCTTCATGAACCCAAAGATTCCATTGATCCTGCTC
____________________________________________________________
consensus TAATGTATTATTCAATGGATGCTATTCTTCATGAACCCAAAGATTCCATTGATCCTGCTC
. : . : . : . : . : . :
rJMSF041K10+ GCGTGCTAGAGAAAGCACACTCAAAAACAAAAGCAAAGGGCTCCTCAACAGCCTGCATCA
rJMSF030E17+ GCGTGCTAGAGAAAGCACACTCAAAAACAAAAGCAAAGGGCTCCTCAACAGCCTGCATCA
rJMSF043B08+ GCGTGCTAGAGAAAGCACACTCAAAAACAAAAGCAAAGGGCTCCTCAACAGCCTGCATCA
rJMFF012A11+ GCGTGCTAGAGAAAGCACACTCAAAAACAAAAGCAAAGGGCTCCTCAACAGCCTGCATCA
rJMSF025G06+ GCGTGCTAGAGAAAGCACACTCAAAAACAAAAGCAAAGGGCTCCTCAACAGCCTGCATCA
rJMSF033K06+ AAAAGCAAAGGGCTCGTCAACANCTTGCATCA
rJMSF032K06+ GCGTGCTAGAGAAAGCACACTCAAAAACAAAAGCAAAGGGCTCCTCAACAGCCTGCATCA
____________________________________________________________
consensus GCGTGCTAGAGAAAGCACACTCAAAAACAAAAGCAAAGGGCTCCTCAACAGCCTGCATCA
. : . : . : . : . : . :
rJMSF041K10+ TAGCCTTGAATAGCCAGGGTCTTCATGCCATCAATCTTGGAGACAGTGGATTTATAGTTG
rJMSF030E17+ TAGCCTTGAATAGCCAGGGTCTTCATGCCATCAATCTTGGAGACAGTGGATTTATAGTTG
rJMSF043B08+ TAGCCTTGAATAGCCAGGGTCTTCATGCCATCAATCTTGGAGACAGTGGATTTATAGTTG
rJMFF012A11+ TAGCCTNGAATAGCCAGGGTCTTCATGCCATCAATCTTGGAGACAGTGGATTTATAGTTG
rJMSF025G06+ TAGCCTTGAATAGCCAGGGTCTTCATGCCATCAATCTTGGAGACAGTGGATTTATAGTTG
rJMSF033K06+ TAGCCTTGAATAGCCAGGGTTTTCATGCCATCAATNTTGGAGACAGTGGATTTATAGTTG
rJMSF032K06+ TAGCCTTGAATAGCCAGGGTCTTCATGCCATCAATCTTGGAGACAGTGGATTTATAGTTG
____________________________________________________________
consensus TAGCCTTGAATAGCCAGGGTCTTCATGCCATCAATCTTGGAGACAGTGGATTTATAGTTG
. : . : . : . : . : . :
rJMSF041K10+ TTAGGGACGGGTGCACCATCTTTGAGAGTCCGGTTCAGCAGCATGGTTTCAATTTTACAT
rJMSF030E17+ TTAGGGACGGGTGCACCATCTTTGAGAGTCCGGTTCAGCAGCATGGTTTCAATTTTACAT
rJMSF043B08+ TTAGGGACGGGTGCACCATCTTTGAGAGTCCGGTTCAGCAGCATGGTTTCAATTTTACAT
rJMFF012A11+ TTAGGGACGGGTGCACCATCTTTGAGAGTCCGGTTCAGCAGCATGGTTTCAATTTTACAT
rJMSF025G06+ TTAGGGACGGGTGCACCATCTTTGAGAGTCCGGTTCAGCAGCATGGTTTCAATTTTACAT
rJMSF033K06+ TTAGGGACGGGTNCACCATCTTTGAGAGTCCGGTTCAGCAGCATGGTTTCAATTTTACAT
rJMSF032K06+ TTAGGGACGGGTGCACCATCTTTGAGAGTCCGGTTCAGCAGCATGGTTTCAATTTTACAT
____________________________________________________________
consensus TTAGGGACGGGTGCACCATCTTTGAGAGTCCGGTTCAGCAGCATGGTTTCAATTTTACAT
. : . : . : . : . : . :
rJMSF041K10+ ATCAACTTGAAAGTGGCAGTAGGGCTGATCTATCAAGTTCTGGTCAGGTTTTCACTATTG
rJMSF030E17+ ATCAACTTGAAAGTGGCAGTAGGGCTGATCTACCAAGTTCTGGTCAGGTTTTCACTATTG
rJMSF043B08+ ATCAACTTGAAAGTGGCAGTAGGGCTGATCTACCAAGTTCTGGTCAGGTTTTCACTATTG
rJMFF012A11+ ATCAACTTGAAAGTGGCAGTAGGGCTGATCTNCCAAGTTCTGGTCAGGTTTTCACTATTG
rJMSF025G06+ ATCAACTTGAAAGTGGCAGTAGGGCTGATCTACCAAGTTCTGGTCAGGTTTTCACTATTG
rJMSF033K06+ ATCAACTTGAAAGTGGCAGTAGGGCTGATCTACCAAGTTNTGGTCAGGTTTTCACTATTG
rJMSF032K06+ ATCAACTTGAAAGTGGCAGTAGGGCTGATCTACCAAGTTCTGGTCAGGTTTTCACTATTG
____________________________________________________________
consensus ATCAACTTGAAAGTGGCAGTAGGGCTGATCTACCAAGTTCTGGTCAGGTTTTCACTATTG
. : . : . : . : . : . :
rJMSF041K10+ CTGTTTTATCGGGAGATGTCATTGTTGCGGGAACTGATGGATTGTTTGACAACTTGTATA
rJMSF030E17+ CTGTTTTATCGGGAGATGTCATTGTTGCGGGAACTGATGGATTGTTTGACAACTTGTATA
rJMSF043B08+ CTGTTTTATCGGGAGATGTCATTGTTGCGGGAACTGATGGATTGTTTGACAACTTGTATA
rJMFF012A11+ CTGTTTTATCGGGAGATGTCATTGTTGCGGGAACTGATGGATTGTTTGACAACTTGTATA
rJMSF025G06+ CTGTTTTATCGGGAGATGTCATTGTTGCGGGAACTGATGGATTGTTTGACAACTTGTATA
rJMSF033K06+ CTGTTTTATCGGGAGATGTCATTGTTGCGGGAACTGATGGATTGTTTGACAACNTGTATA
rJMSF032K06+ CTGTTTTATCGGGAGATGTCATTGTTGCGGGAACTGATGGATTGTTTGACAACTTGTATA
____________________________________________________________
consensus CTGTTTTATCGGGAGATGTCATTGTTGCGGGAACTGATGGATTGTTTGACAACTTGTATA
. : . : . : . : . : . :
rJMSF041K10+ AAGATGAAGTAGCTGGTGTTGTTCGCGATGCAGTAAACTCTGGGTGCAACCCGGAGGCCA
rJMSF030E17+ AAGATGAAGTAGCTGGTGTTGTTCGCGATGCAGTAAACTCTGGGTGCAACCCGGAGGCCA
rJMSF043B08+ AAGATGAAGTAGCTGGTGTTGTTCGCGATGCAGTAAACTCTGGGTGCAACCCGGAGGCCA
rJMFF012A11+ AAGATGAAGTAGCTGGTGTTGTTCGCGATGCAGTAAACTCTGGGTGCAACCCGGAGGCCA
rJMSF025G06+ AAGATGAAGTAGCTGGTGTTGTTCGCGATGCAGTAAACTCTGGGTGCAACCCGGAGGCCA
rJMSF033K06+ AAGATGAAGTAGCNGGTGTTGTTCGCGATGCAGTAAACTTTGGGTGCAACCCGGAGGCCA
rJMSF032K06+ AAGATGAAGTAGCTGGTGTTGTTCGCGATGCAGTAAACTCTGGGTGCAACCCGGAGGCCA
____________________________________________________________
consensus AAGATGAAGTAGCTGGTGTTGTTCGCGATGCAGTAAACTCTGGGTGCAACCCGGAGGCCA
. : . : . : . : . : . :
rJMSF041K10+ CTGCTCAGAAAATAGCAGCTTTAGCACGGCAAAGAGCTCTGGATAGGAAACGACAAACTC
rJMSF030E17+ CTGCTCAGAAAATAGCAGCTTTAGCACGGCAAAGAGCTCTGGATAGGAAACGACAAACTC
rJMSF043B08+ CTGCTCAGAAAATAGCAGCTTTAGCACGGCAAAGAGCTCTGGATAGGAAACGACAAACTC
rJMFF012A11+ CTGCTCAGAAAATAGCAGCTTTAGCACGGCAAAGAGCTCTGGATAGGAAACGACAAACTC
rJMSF025G06+ CTGCTCAGAAAATAGCAGCTTTAGCACGGCAAAGAGCTCTGGATAGGAAACGACAAACTC
rJMSF033K06+ CTGCTCAGAAAATAGCAGCTTTAGCACGGCAAAGAGCTNTGGATAGGAAACGACAAACTC
rJMSF032K06+ CTGCTCAGAAAATAGCAGCTTTAGCACGGCAAAGAGCTCTGGATAGGAAACGACAAACTC
____________________________________________________________
consensus CTGCTCAGAAAATAGCAGCTTTAGCACGGCAAAGAGCTCTGGATAGGAAACGACAAACTC
. : . : . : . : . : . :
rJMSF041K10+ CATTTGCTGATGCAGCACAAGAAGCTGGGTATCAATATTATGGT--TAAACTAGATGACC
rJMSF030E17+ CATTTGCTGATGCAGCACAAGAAGCTGGGTATCAATATTATGGTGGTAAACTAGATGACC
rJMSF043B08+ CATTTGCTGATGCAGCACAAGAAGCTGGGTATCAATATTATGGTGGTAAACTAGATGACC
rJMFF012A11+ CATTTGCTGATGCAGCACAAGAAGCTGGGTATCAATATTATGGTGGTAAACTAGATGACC
rJMSF025G06+ CATTTGCTGATGCAGCACAAGAAGCTGGGTATCAATATTATGGTGGTAAACTAGATGACC
rJMSF033K06+ CATTTGCTGATGCAGCACAAGAAGCCGGGTATCAATATTANGGTGGNAAACTAGATGACC
rJMSF032K06+ CATTTGCTGATGCAGCACAAGAAGCTGGGTATCAATATTATGGTGGTAAACTAGATGACC
____________________________________________________________
consensus CATTTGCTGATGCAGCACAAGAAGCTGGGTATCAATATTATGGTGGTAAACTAGATGACC
. : . : . : . : . : . :
rJMSF041K10+ TTACAGTTGTCGTCTCTTTTGTTACTTAGCTGAGCTTATTCTTCCTATGCTTCTCCTTTT
rJMSF030E17+ TTACAGTTGTCGTCTCTTTTGTTACTTAGCTGAGCTTATTCTTCCTATGCTTCTCCTTTT
rJMSF043B08+ TTACAGTTGTCGTCTCTTTTGTTACTTAGCTGAGCTTATTCTTCCTATGCTTCTCCTTTT
rJMFF012A11+ TTACAGTTGTCGTCTCTTTTGTTACTTAGCTGAGCTTATTCTTCCTATGCTTCTCCTNTT
rJMSF025G06+ TTACAGTTGTCGTCTCTTTTGTTACTTAGCTGAGCTTATTCTTCCTATGCTTCTCCTTTT
rJMSF033K06+ TTACAGTNGTCGTCTCTTTNGTTACTTAGCTGAGCTTATTCTTCCTANGCTTCTCCTT
rJMSF032K06+ TTACAGTTGTCGTCTCTTTTGTTACTTAGCTGAGCTTATTCTTCCTATGCTTCTCCTTTT
____________________________________________________________
consensus TTACAGTTGTCGTCTCTTTTGTTACTTAGCTGAGCTTATTCTTCCTATGCTTCTCCTTTT
. : . : . : . : . : . :
rJMSF041K10+ CACTGGCTTTTTCTCTGTTAGCACTTTGTTAGATCTCTC
rJMSF030E17+ CACTGGCTTTTTCTCTGTTAGCACTTT
rJMSF043B08+ CACTGGCTTTTTCTCTGTTAGCACTTTGTTAGATCTCTCCC
rJMFF012A11+ CACTGGCTTTTTCTCTGTTAGCACNTTGTTAGA
rJMSF025G06+ CACTGGCTTTTTCTCTGTTAGCACTTTGTTAGATCTCTCCC
rJMSF032K06+ CACTGGCTTTTTCTCTGTTAGCACTTTGTTAGATCTCTCCCTTGTCTCTGAATATAATGG
____________________________________________________________
consensus CACTGGCTTTTTCTCTGTTAGCACTTTGTTAGATCTCTCCCTTGTCTCTGAATATAATGG