Contig 001389: Sequence
BLAST Hits against nr-aa DB Show
Alignment
This contig is upended
. : . : . : . : . : . :
JMSF048D06- GGCATCCATTTTCTGTCGGGACT
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consensus GGCATCCATTTTCTGTCGGGACT
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JMSF048D06- TTTTTCAAACACCTTTCACCTCCCAAAACTTCCGTCCTTAAACCAATCAGCAAATCCTTG
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consensus TTTTTCAAACACCTTTCACCTCCCAAAACTTCCGTCCTTAAACCAATCAGCAAATCCTTG
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JMSF048D06- GTCACCGTCGCCTCCGCCGCACCTCCTGCCACTCCCCATTTCGGAGCCCTCAATTCTCAC
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consensus GTCACCGTCGCCTCCGCCGCACCTCCTGCCACTCCCCATTTCGGAGCCCTCAATTCTCAC
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JMSF048D06- CAGAAGCAACAAGTCCATGTCTACATCGATTCTCTTCTCCAGTGGAACCAGGTTCCTTTC
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consensus CAGAAGCAACAAGTCCATGTCTACATCGATTCTCTTCTCCAGTGGAACCAGGTTCCTTTC
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JMSF048D06- AATATGTTTCTCTGTTATGTGCATGTGCCTGTATCTTATATGTGAAACCTTTGAGATTTT
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consensus AATATGTTTCTCTGTTATGTGCATGTGCCTGTATCTTATATGTGAAACCTTTGAGATTTT
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JMSF048D06- ACTGCTTGCAGAAAATGAATCTCACGGCGGTGAGGGAGGAAAGTGAGGTCATGGAAAGAC
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consensus ACTGCTTGCAGAAAATGAATCTCACGGCGGTGAGGGAGGAAAGTGAGGTCATGGAAAGAC
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JMSF048D06- ACATCGAGGACTCGCTTGCAATTATCGAGCCGATTCGAAATTCCTATGTGTCACGTTGTG
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consensus ACATCGAGGACTCGCTTGCAATTATCGAGCCGATTCGAAATTCCTATGTGTCACGTTGTG
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JMSF048D06- GTGCTTCTTCTGAGAATCTTAAGATTGTCGATGTAGGCACTGGAGCGGGGCTTCCTGGAC
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consensus GTGCTTCTTCTGAGAATCTTAAGATTGTCGATGTAGGCACTGGAGCGGGGCTTCCTGGAC
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JMSF048D06- TTATATTAGCTATTGCTTGCCCTGATTGGAAAGTGACACTTCTAGAATCTTTGAATAAGC
rJMSF048D06+ TGATTGGAAAGTGACACTTCTAGAATCTTTGAATAAGC
rJMSF027H02+ ATAAGC
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consensus TTATATTAGCTATTGCTTGCCCTGATTGGAAAGTGACACTTCTAGAATCTTTGAATAAGC
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JMSF048D06- GATGCCAATTTTTGGAGCATGTGGCT-GGGGAAACTGGTCTGTCAAATGTGGAAGTTATA
rJMSF048D06+ GATGCCAATTTTTGGAGCATGTGGCT-GGGGAAACTGGTCTGTCAAATGTGGAAGTTATA
rJMSF027H02+ GATGCCAATTTTTGGAGCATGTGGCTGGGGGAAACTGGTCTGTCAAATGTGGAAGTTATA
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consensus GATGCCAATTTTTGGAGCATGTGGCT-GGGGAAACTGGTCTGTCAAATGTGGAAGTTATA
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JMSF048D06- AGAGAAAGGGCTGAGGACAGAATTTAGGGCAAAATCAGAACTTCAGAGAGTCATTTGATG
rJMSF048D06+ AGAGAAAGGGCTGAGGACAGAATTTAGGGCAAAATCAGAACTTCAGAGAGTCATTTGATG
rJMSF027H02+ AGAGAAAGGGCTGAG-----AATTTAGGGCAAAATCAGAACTTCAGAGAGTCATTTGATG
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consensus AGAGAAAGGGCTGAGGACAGAATTTAGGGCAAAATCAGAACTTCAGAGAGTCATTTGATG
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JMSF048D06- TTGCAATAGCCAGAGTAGTTGCAGAAATGAGAATTTTAGCTGAATATTGCCTTCCTCTCG
rJMSF048D06+ TTGCAATAGCCAGAGTAGTTGCAGAAATGAGAATTTTAGCTGAATATTGCCTTCCTCTCG
rJMSF027H02+ TTGCAATAGCCAGAGCAGTTGCAGAAATGAGAATTTTAGCTGAATATTGCCTTCCTCTCG
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consensus TTGCAATAGCCAGAGTAGTTGCAGAAATGAGAATTTTAGCTGAATATTGCCTTCCTCTCG
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JMSF048D06- TTCGCGTTGGTGGCTTGNTTGTA
rJMSF048D06+ TTCGCGTTGGTGGCTTGTTTGTAGCTGCAAAGGGTCATGATCCTCAGGAGGAAGTGAGAA
rJMSF027H02+ TTCGCGTTGGTGGCTTGTTTGTAGCTGCAAAGGGTCATGATCCTCAGGAGGAAGTGAGAA
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consensus TTCGCGTTGGTGGCTTGTTTGTAGCTGCAAAGGGTCATGATCCTCAGGAGGAAGTGAGAA
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rJMSF048D06+ GAGCAGAGAGAGCAATACATTTGATGGGTGCAACTCTATGGCAAACTTGCTATGTTGATT
rJMSF027H02+ GAGCAGAGAGAGCAATACATTTGATGGGTGCAACTCTATGGCAAACTTGCTATGTTGATT
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consensus GAGCAGAGAGAGCAATACATTTGATGGGTGCAACTCTATGGCAAACTTGCTATGTTGATT
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rJMSF048D06+ CACACAGTAAGTATGGGCAGAGAACTGCCATCGTTTGCTTGAAAGGTGGTCCAACCCCAA
rJMSF027H02+ CACACAGTAAGTATGGGCAGAGAACTGCCATCGTTTGCTTGAAAGGTGGTCCAACCCCAA
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consensus CACACAGTAAGTATGGGCAGAGAACTGCCATCGTTTGCTTGAAAGGTGGTCCAACCCCAA
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rJMSF048D06+ AGAAATATCCCAGAGATCCAGGAACTCCAGCAAAGTTACCTCTTTAAATATGGTGAATTT
rJMSF027H02+ AGAAATATCCCAGAGATCCAGGAACTCCAGCAAAGTTACCTCTTTAAATATGGTGAATTT
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consensus AGAAATATCCCAGAGATCCAGGAACTCCAGCAAAGTTACCTCTTTAAATATGGTGAATTT
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rJMSF048D06+ TATACCCCTGCTAAGTTTTCCTACTTGTACAGCAGCTTTGATAATAGGACAGCACCTCAC
rJMSF027H02+ TATACCCCTGCTAAGTTTTCCTACTTGTACAGCAGCTTTGATAATAGGACAGCACCTCAC
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consensus TATACCCCTGCTAAGTTTTCCTACTTGTACAGCAGCTTTGATAATAGGACAGCACCTCAC
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rJMSF048D06+ ATTTGAAGTAGGGTGCAATGGTCAATGCCCAAATGACAGGAGCTATGTGCAAACACTCTT
rJMSF027H02+ ATTTGAAGTAGGGTGCAATGGTCAATGCCCAAATGACAGGAGCTATGTGCAAACACTCTT
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consensus ATTTGAAGTAGGGTGCAATGGTCAATGCCCAAATGACAGGAGCTATGTGCAAACACTCTT
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rJMSF048D06+ CCCTCAAATTTGAAACTATTCTTACCAGTATAAACAAGATGTTACCAACTTTGTGGCTCA
rJMSF027H02+ CCCTCAAATTTGAAACTATTCTTACCAGTATAAACAAGATGTTACCAACTTTGTGGCTCA
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consensus CCCTCAAATTTGAAACTATTCTTACCAGTATAAACAAGATGTTACCAACTTTGTGGCTCA
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rJMSF048D06+ CTGCCATGAAATTGATCGGCATTTTTGGGAGGTACTGGAGAAAGAGCTGAGTGGTGGTGG
rJMSF027H02+ CTGCCATGAAATTGATCGGCATTTTTGGGAGGTACTGGAGAAAGAGCTGAGTGGTGGTGG
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consensus CTGCCATGAAATTGATCGGCATTTTTGGGAGGTACTGGAGAAAGAGCTGAGTGGTGGTGG
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rJMSF048D06+ CTCCTGAATCTGTTCTTGAAGCTGCTAATTGCAGCACAGCACAGCAGAAATGCAC
rJMSF027H02+ CTCCTGAATCTGTTCTTGAAGCTGCTAATTGCAGCACAGCACAGCAGAAATGCACAGAAA
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consensus CTCCTGAATCTGTTCTTGAAGCTGCTAATTGCAGCACAGCACAGCAGAAATGCACAGAAA