Contig 001340:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF018J04Sequence234003564 (11)ref|XP_003604927.1|5e-05Serine carboxypeptidase [Medicago truncatula]789001340 (3)ref|XP_010320344.1|5e-47PREDICTED: serine carboxypeptidase-like 10 isoform X3 [Solanum lycopersicum]
JMSF026K04Sequence672003564 (11)emb|CDP17658.1|7e-66unnamed protein product [Coffea canephora]764001340 (3)ref|XP_010320344.1|3e-47PREDICTED: serine carboxypeptidase-like 10 isoform X3 [Solanum lycopersicum]
JMSF037P14Sequence671003564 (11)emb|CDP17658.1|8e-66unnamed protein product [Coffea canephora]739001340 (3)ref|XP_010320344.1|2e-48PREDICTED: serine carboxypeptidase-like 10 isoform X3 [Solanum lycopersicum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF026K04+ ATTATATTTACCGAGC
rJMSF037P14+ TACATAGTTGNCAATGGATTCACAATTCCAGTTGACAACTTGTATTATATTTACCGAGC
rJMSF018J04+ TTACCGAGC
                      ____________________________________________________________
consensus TACATAGTTGNCAATGGATTCACAATTCCAGTTGACAACTTGTATTATATTTACCGAGC
 
. : . : . : . : . : . :
rJMSF026K04+ GGGTCGCGGATTAGGTCGTATTTCAGAAGAAGCGTATACGAAATTGGAAGATTGTATAAA
rJMSF037P14+ GGGTCGCGGATTAGGTCGTATTTCAGAAGAAGCGTATACGAAATTGGAAGATTGTATAAA
rJMSF018J04+ GGGTCGCGGATTAGGTCGTATTTCAGAAGAAGCGTATACGAAATTGGAAGATTGTATAAA
                      ____________________________________________________________
consensus GGGTCGCGGATTAGGTCGTATTTCAGAAGAAGCGTATACGAAATTGGAAGATTGTATAAA
 
. : . : . : . : . : . :
rJMSF026K04+ GATAAAATTTTCTGATCCAAATTGCAGTATAGAGATAGGTTTAATGAATGTGGTGCCCCA
rJMSF037P14+ GATAAAATTTTCTGATCCAAATTGCAGTATAGAGATAGGTTTAATGAATGTGGTGCCCCA
rJMSF018J04+ GATAAAATTTTCTGATCCAAATTGCAGTATAGAGATAGGTTTAATGAATGTGGTGCCCCA
                      ____________________________________________________________
consensus GATAAAATTTTCTGATCCAAATTGCAGTATAGAGATAGGTTTAATGAATGTGGTGCCCCA
 
. : . : . : . : . : . :
rJMSF026K04+ TTATTATTTGCCTAATGTTATTGGAGAAGAAAATGATGCTAAGAGGTTCCTTGGGTACAA
rJMSF037P14+ TTATTATTTGCCTAATGTTATTGGAGAAGAAAATGATGCTAAGAGGTTCCTTGGGTACAA
rJMSF018J04+ TTATTATTTGCCTAATGTTATTGGAGAAGAAAATGATGCTAAGAGGTTCCTTGGGTACAA
                      ____________________________________________________________
consensus TTATTATTTGCCTAATGTTATTGGAGAAGAAAATGATGCTAAGAGGTTCCTTGGGTACAA
 
. : . : . : . : . : . :
rJMSF026K04+ TGTACATGCCTTTGATCGTGGATTATTATATTCGGCTGGACAAATTGCATCTCAATGGAT
rJMSF037P14+ TGTACATGCCTTTGATCGTGGATTATTATATTCGGCTGGACAAATTGCATCTCAATGGAT
rJMSF018J04+ TGTACATGCCTTTGATCGTGGATTATTATATTCGGCTGGACAAATTGCATCTCAATGGAT
                      ____________________________________________________________
consensus TGTACATGCCTTTGATCGTGGATTATTATATTCGGCTGGACAAATTGCATCTCAATGGAT
 
. : . : . : . : . : . :
rJMSF026K04+ TAATAATGATATCGTTCAAGAGGCCTTGCATGTTCGGAAGGGATGCGGTGAAAAATGGGA
rJMSF037P14+ TAATAATGATATCGTTCAAGAGGCCTTGCATGTTCGGAAGGGATGCGGTGAAAAATGGGA
rJMSF018J04+ TAATAATGATATCGTTCAAGAGGCCTTGCATGTTCGGAAGGGATGCGGTGAAAAATGGGA
                      ____________________________________________________________
consensus TAATAATGATATCGTTCAAGAGGCCTTGCATGTTCGGAAGGGATGCGGTGAAAAATGGGA
 
. : . : . : . : . : . :
rJMSF026K04+ TAAATGCAGGAGACCAATAGCGCGATATAAAAAAACTGTGAACGACAGTAGACCATATCA
rJMSF037P14+ TAAATGCAGGAGACCAATAGCGCGATATAAAAAAACTGTGAACGACAGTAGACCATATCA
rJMSF018J04+ TAAATGCAGGAGACCAATAGCGCGATATAAAAAAACTGTGAACGACAGTAGACCATATCA
                      ____________________________________________________________
consensus TAAATGCAGGAGACCAATAGCGCGATATAAAAAAACTGTGAACGACAGTAGACCATATCA
 
. : . : . : . : . : . :
rJMSF026K04+ TGCAAATCTTAGCACAAAAAGTTATAGATCTCTTATATACAGTGGAAGTGCAGATGTGTA
rJMSF037P14+ TGCAAATCTTAGCACAAAAAGTTATAGATCTCTTATATACAGTGGAAGTGCAGATGTGTA
rJMSF018J04+ TGCAAATCTTAGCACAAAAAGTTATAGATCTCTTATATACAGTGGAAGTGCAGATGTGTA
                      ____________________________________________________________
consensus TGCAAATCTTAGCACAAAAAGTTATAGATCTCTTATATACAGTGGAAGTGCAGATGTGTA
 
. : . : . : . : . : . :
rJMSF026K04+ TATTTCTTCATTTTATACTGAATTCTGGACAAAGTCATTGAATTATTCTATCATTGGTGA
rJMSF037P14+ TATTTCTTCATTTTATACTGAATTCTGGACAAAGTCATTGAATTATTCTATCATTGGTGA
rJMSF018J04+ TATTTCTTCATTTTATACTGAATTCTGGACAAAGTCATTGAATTATTCTATCATTGGTGA
                      ____________________________________________________________
consensus TATTTCTTCATTTTATACTGAATTCTGGACAAAGTCATTGAATTATTCTATCATTGGTGA
 
. : . : . : . : . : . :
rJMSF026K04+ TTGGCGACCTTGGTTTGTGAACAATCGAGTTGTTGGTTATACAAGGACTTTCTCCAACAA
rJMSF037P14+ TTGGCGACCTTGGTTTGTGAACAATCGAGTTGTTGGTTATACAAGGACTTTCTCCAACAA
rJMSF018J04+ TTGGCGACCTTGGTTTGTGAACAATCGAGTTGTTGGTTATACAAGGACTTTCTCCAACAA
                      ____________________________________________________________
consensus TTGGCGACCTTGGTTTGTGAACAATCGAGTTGTTGGTTATACAAGGACTTTCTCCAACAA
 
. : . : . : . : . : . :
rJMSF026K04+ CATGACATATGCCAAAATCCTGGGATCAGACCACGTTGCTCCAACAATAACACCCGCCGA
rJMSF037P14+ CATGACATATGCCAAAATCCTGGGATCAGACCACGTTGCTCCAACAATAACACCCGCCGA
rJMSF018J04+ CATGACATATGCCAAAATCCTGGGATCAGACCACGTTGCTCCAACAATAACACCCGCCGA
                      ____________________________________________________________
consensus CATGACATATGCCAAAATCCTGGGATCAGACCACGTTGCTCCAACAATAACACCCGCCGA
 
. : . : . : . : . : . :
rJMSF026K04+ GTGCTTCAAAATGTTTAAGAGATGGATATCTTATGAACAACTTTAATATTGTATGGCAA
rJMSF037P14+ GTGCTTCAAAATGTTTAAGAGATGGATATCTTATGAACAACTTTAATATTGTATGGCAAT
rJMSF018J04+ GTGCTTCAAAATGTTTAAGAGATGGATATCTTATGAACAACTTTAATATTGTATGGCAAT
                      ____________________________________________________________
consensus GTGCTTCAAAATGTTTAAGAGATGGATATCTTATGAACAACTTTAATATTGTATGGCAAT
 
. : . : . : . : . : . :
rJMSF037P14+ GGTAAAATCTATGT
rJMSF018J04+ GGTAAAATCTATGTTAAAAGTACTTTTCATTCAATAACACATTGTTGTACCTAAGTTTTA
                      ____________________________________________________________
consensus GGTAAAATCTATGTTAAAAGTACTTTTCATTCAATAACACATTGTTGTACCTAAGTTTTA
 
. : . : . : . : . : . :
rJMSF018J04+ TTTTGATGGTTTATGATGAACTTCATGTCAAAAACTACAAAATGTTTTTGTAGTAGAATA
                      ____________________________________________________________
consensus TTTTGATGGTTTATGATGAACTTCATGTCAAAAACTACAAAATGTTTTTGTAGTAGAATA