Contig 001327:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF047O01+                                                       TTTGCTTTCGGTGGT
rJMSF015O15+                            CNGAGAATGAGCGTGACTTCATCGACGTTTGCTTTCGGTGGT
                      ____________________________________________________________
consensus                               CNGAGAATGAGCGTGACTTCATCGACGTTTGCTTTCGGTGGT
 
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rJMSF047O01+          CACCGACGACTTATT-GGAATATGGTCACACCAAGCGTACAATAATCAAGGCTACTATAA
rJMSF015O15+          CACCGACGACTTATTGGGAATATGGTCACACCAAGCGTACTATAATCAAGGCTACTATAA
                      ____________________________________________________________
consensus             CACCGACGACTTATTGGGAATATGGTCACACCAAGCGTACTATAATCAAGGCTACTATAA
 
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rJMSF047O01+          TGACGTTAATAGTGGGTGGGTCAGATACCACAGCGGTCACCTTGACATGGGTGCTATCCT
rJMSF015O15+          TGACGTTAATAGTGGGTGGGTCAGATACCACAGCGGTCACCTTGACATGGGTGCTATCCT
                      ____________________________________________________________
consensus             TGACGTTAATAGTGGGTGGGTCAGATACCACAGCGGTCACCTTGACATGGGTGCTATCCT
 
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rJMSF047O01+          TACTGCTCAACAACAGAGATGCGCTGCAGCGTGCCCAGAAGGAGATAGACACCGTCGTCG
rJMSF015O15+          TACTGCTCAACAACAGAGATGCGCTGCAGCGTGCCCAGAAGGAGATAGACACCGTCGTCG
                      ____________________________________________________________
consensus             TACTGCTCAACAACAGAGATGCGCTGCAGCGTGCCCAGAAGGAGATAGACACCGTCGTCG
 
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rJMSF047O01+          GCGTCGGAAGATGGGTGGAAGAATCCGACATCAAGAACCTCCCATACCTACAAGCCATCA
rJMSF015O15+          GCGTCGGAAGATGGGTGGAAGAATCCGACATCAAGAACCTCCCATACCTACAAGCCATCA
                      ____________________________________________________________
consensus             GCGTCGGAAGATGGGTGGAAGAATCCGACATCAAGAACCTCCCATACCTACAAGCCATCA
 
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rJMSF047O01+          TAAAAGAAACGTTACGCCTGTACCCAGCGGCGCCGCTCTCAGTACCGCACGTAGCCACGG
rJMSF015O15+          TAAAAGAAACGTTACGCCTGTACCCAGCGGCGCCGCTCTCAGTACCGCACGTAGCCACGG
                      ____________________________________________________________
consensus             TAAAAGAAACGTTACGCCTGTACCCAGCGGCGCCGCTCTCAGTACCGCACGTAGCCACGG
 
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rJMSF047O01+          AGGATTGCGACGTCGCCGGCTATAACATTCCGAGAGGAACGCGCTTGCTGGTGAACCTAT
rJMSF015O15+          AGGATTGCGACGTCGCCGGCTATAACATTCCGAGAGGAACGCGCTTGCTGGTGAACCTAT
                      ____________________________________________________________
consensus             AGGATTGCGACGTCGCCGGCTATAACATTCCGAGAGGAACGCGCTTGCTGGTGAACCTAT
 
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rJMSF047O01+          GGAAGCTGCACAGGGACCCTGAGGTGTGGGCGGGCGCCGAGGAATTCCGGCCCGAAAGGT
rJMSF015O15+          GGAAGCTGCACAGGGACCCTGAGGTGTGGGCGGGCGCCGAGGAATTCCGGCCCGAAAGGT
                      ____________________________________________________________
consensus             GGAAGCTGCACAGGGACCCTGAGGTGTGGGCGGGCGCCGAGGAATTCCGGCCCGAAAGGT
 
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rJMSF047O01+          TCTTGCCCGGAGGCGGCGCGTCCGAGGCGGATTTTCGCGGCCAGCATTTCGAGTTCATCC
rJMSF015O15+          TCTTGCCCGGAGGCGGCGCGTCCGAGGCGGATTTTCGCGGCCAGCATTTCGAGTTCATCC
                      ____________________________________________________________
consensus             TCTTGCCCGGAGGCGGCGCGTCCGAGGCGGATTTTCGCGGCCAGCATTTCGAGTTCATCC
 
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rJMSF047O01+          CGTTCGGATCTGGGCGGCGGTCGTGCCCGGGGATTACTTTCGCGATGCAAGTGAACCACC
rJMSF015O15+          CGTTCGGATCTGGGCGGCGGTCGTGCCCGGGGATTACTTTCGCGATGCAAGTGAACCACC
                      ____________________________________________________________
consensus             CGTTCGGATCTGGGCGGCGGTCGTGCCCGGGGATTACTTTCGCGATGCAAGTGAACCACC
 
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rJMSF047O01+          TCGTGGTTGCTCGGTTGCTTCAAGGTTTCGATTTTAGTACGCCGTCGCACGCGGCGGTGG
rJMSF015O15+          TCGTGGTTGCTCGGTTGCTTCAAGGTTTCGATTTTAGTACGCCGTCGCACGCGGCGGTGG
                      ____________________________________________________________
consensus             TCGTGGTTGCTCGGTTGCTTCAAGGTTTCGATTTTAGTACGCCGTCGCACGCGGCGGTGG
 
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rJMSF047O01+          ACATGACGGAGGGCGTTAGCGTTACCCTCCCCAAGGCTAAACCCTTGGAAATACTAGTTG
rJMSF015O15+          ACATGACGGAGGGCGTTAGCGTTACCCTCCCCAAGGCTAAACCCTTGGAAATACTAGTTG
                      ____________________________________________________________
consensus             ACATGACGGAGGGCGTTAGCGTTACCCTCCCCAAGGCTAAACCCTTGGAAATACTAGTTG
 
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rJMSF047O01+          CCCCTCGTCTTCCTTCTCTACTTTATGAATCTTAAATATTTTTAAATTACACAAATACCA
rJMSF015O15+          CCCCTCGTCTTCCTTCTCTACTTTATGAATCTTAAATATTTTTAAATTACACAAATACCA
                      ____________________________________________________________
consensus             CCCCTCGTCTTCCTTCTCTACTTTATGAATCTTAAATATTTTTAAATTACACAAATACCA
 
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rJMSF047O01+          CCGTGTGTGGTTTAGCATCTATTTTTCAAAAATAGATGCTAATAGTCTATTTGTTTTGT 
rJMSF015O15+          CCGTGTGTGGTTTAGCATCTATTTTTCAAAAATAGATGCTAATAGTCTATTTGTTTTGTC
                      ____________________________________________________________
consensus             CCGTGTGTGGTTTAGCATCTATTTTTCAAAAATAGATGCTAATAGTCTATTTGTTTTGTC