Contig 001324:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011J04Sequence595013227 (4)ref|XP_006357501.1|1e-24PREDICTED: probable protein phosphatase 2C 52-like [Solanum tuberosum]779001324 (4)ref|XP_006357501.1|1e-124PREDICTED: probable protein phosphatase 2C 52-like [Solanum tuberosum]
JMFF039E18Sequence765001324 (4)ref|XP_006357501.1|9e-109PREDICTED: probable protein phosphatase 2C 52-like [Solanum tuberosum]
JMSF005E01Sequence414013227 (4)207001324 (4)ref|XP_009619304.1|1e-06PREDICTED: probable protein phosphatase 2C 52 [Nicotiana tomentosiformis] ref|XP
JMSF015I24Sequence347013227 (4)787001324 (4)ref|XP_009776219.1|2e-63PREDICTED: probable protein phosphatase 2C 52 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF039E18+ TGCAAGA
rJMFF011J04+ TGCATTGCAAGA
                      ____________________________________________________________
consensus TGCATTGCAAGA
 
. : . : . : . : . : . :
rJMFF039E18+ TGAGCCCGAAGTGCAGAGGGTTTGGCTGCCATTTGATAATGCCCCTGGGGTTAGCTATGG
rJMFF011J04+ TGAGCCCGAAGTGCAGAGGGTTTGGCTGCCATTTGATAATGCCCCT-GGGTTAGCTATGG
                      ____________________________________________________________
consensus TGAGCCCGAAGTGCAGAGGGTTTGGCTGCCATTTGATAATGCCCCTGGGGTTAGCTATGG
 
. : . : . : . : . : . :
rJMFF039E18+ CTCGAGCATTTGGGGATTTTTGTCTGAAGGAATATGGAGTTATCTCTATTCCTGAAGTTT
rJMFF011J04+ CTCGAGCATTTGGGGATTTTTGTCTGAAGGAATATGGAGTTATCTCTATTCCTGAAGTTT
                      ____________________________________________________________
consensus CTCGAGCATTTGGGGATTTTTGTCTGAAGGAATATGGAGTTATCTCTATTCCTGAAGTTT
 
. : . : . : . : . : . :
rJMFF039E18+ CTCATCGTGTTCTTACTGATCGGGATAAGTTCATTGTTCTTGCTTCTGATGGTGTATGGG
rJMFF011J04+ CTCATCGTGTTCTTACTGATCGGGATAAGTTCATTGTTCTTGCTTCTGATGGTGTATGGG
                      ____________________________________________________________
consensus CTCATCGTGTTCTTACTGATCGGGATAAGTTCATTGTTCTTGCTTCTGATGGTGTATGGG
 
. : . : . : . : . : . :
rJMFF039E18+ ATGTTCTGAGCAATGAAGAAGTGGTTGAAATTGTGTCGGGAGCTCCTTCGAGGTCATCTG
rJMFF011J04+ ATGTTCTGAGCAATGAAGAAGTGGTTGAAATTGTGTCGGGAGCTCCTTCGAGGTCATCTG
rJMSF015I24+ TCATCTG
                      ____________________________________________________________
consensus ATGTTCTGAGCAATGAAGAAGTGGTTGAAATTGTGTCGGGAGCTCCTTCGAGGTCATCTG
 
. : . : . : . : . : . :
rJMFF039E18+ CAGCAAGAACAGTAGTCGAGTCTGCAGCACGTGAATGGAAGACCAAATACCCGACGTCCA
rJMFF011J04+ CAGCAAGAACAGTAGTCGAGTCTGCAGCACGTGAATGGAAGACCAAATACCCGACGTCCA
rJMSF015I24+ CAGCAAGAACAGTAGTCGAGTCGGCAGCACGTGAATGGAAGACCAAATACCCGACGTCCA
                      ____________________________________________________________
consensus CAGCAAGAACAGTAGTCGAGTCTGCAGCACGTGAATGGAAGACCAAATACCCGACGTCCA
 
. : . : . : . : . : . :
rJMFF039E18+ AGATGGACGATTGTGCAGTTGTTTGCTTGTTCTTGGATGGGAAGATGGACTCGGAATCCG
rJMFF011J04+ AGATGGACGATTGTGCAGTTGTTTGCTTGTTCTTGGATGGGAAGATGGACTCGGAATCCG
rJMSF015I24+ AGATGGACGATTGTGCAGTTGTTTGCTTGTTCTTGGATGGGAAGATGGACTCGGAATCCG
                      ____________________________________________________________
consensus AGATGGACGATTGTGCAGTTGTTTGCTTGTTCTTGGATGGGAAGATGGACTCGGAATCCG
 
. : . : . : . : . : . :
rJMFF039E18+ ACTACGAAGAACAAGGTTTCTCGTCTGCCACGATTCAGAGCAACCATTCTGGCAACGTTG
rJMFF011J04+ ACTACGAAGAACAAGGTTTCTCGTCTGCCACGATTCAGAGCAACCATTCTGGCAACGTTG
rJMSF015I24+ ACTACGAAGAACAAGGTTTCTCGTCTGCCACGATTCAGAGCAACCATTCTGGCAACGTTG
                      ____________________________________________________________
consensus ACTACGAAGAACAAGGTTTCTCGTCTGCCACGATTCAGAGCAACCATTCTGGCAACGTTG
 
. : . : . : . : . : . :
rJMFF039E18+ CAGAATCGGACGATGGACAGAACATCATCGAACCGTCCCTGCAGAGAAACTGTACTGTCC
rJMFF011J04+ CAGAATCGGACGATGGACAGAACATCATCGAACCGTCCCTGCAGAGAAACTGTACTGTCC
rJMSF015I24+ CAGAATCGGACGATGGACAGAACATCATCGAACCGTCCCTGCAGAGAAACTGTACTGTCC
                      ____________________________________________________________
consensus CAGAATCGGACGATGGACAGAACATCATCGAACCGTCCCTGCAGAGAAACTGTACTGTCC
 
. : . : . : . : . : . :
rJMFF039E18+ GATCAGCAGAAGAGAACGAGGCATACAAAATAATAGTAGCAGATACGCAAACAAATGAAG
rJMFF011J04+ GATCAGCAGAAGAGAACGAGGCATACAAAATAATAGTAGCAGATACGCAAACAAATGAAG
rJMSF015I24+ GATCAGCAGAAGAGAACGAGGCATACAAAATAATAGTAGCAGATACGCAAACAAATGAAG
                      ____________________________________________________________
consensus GATCAGCAGAAGAGAACGAGGCATACAAAATAATAGTAGCAGATACGCAAACAAATGAAG
 
. : . : . : . : . : . :
rJMFF039E18+ AACCTGTTGAAGGAGAAACCCAGAATTGGTCGGGATTGGAAGGCGTCACGCGTGTCAACT
rJMFF011J04+ AACCTGTTGAAGGAGAAACCCAGAATTGGTCGGGATTGGAAGGCGTCACGCGTGTCAACT
rJMSF005E01+ GAATTGGTCGGGATTGGAAGGCGTCACGCGTGTCAACT
rJMSF015I24+ AACCTGTTGAAGGAGAAACCCAGAATTGGTCGGGATTGGAAGGCGTCACGCGTGTCAACT
                      ____________________________________________________________
consensus AACCTGTTGAAGGAGAAACCCAGAATTGGTCGGGATTGGAAGGCGTCACGCGTGTCAACT
 
. : . : . : . : . : . :
rJMFF039E18+ CCTTGGTTCAACTCCCCAGATTTTCCGGTGAGAGGCAAAGGCCTTAACTTTTTTCGTTTG
rJMFF011J04+ CCTTGGTTCAACTCCCCAGATTTTCCGGTGAGAGGCAAAGGCCTTAACTTTTTTCGTTTG
rJMSF005E01+ CCTTGGTTCAACTCCCCAGATTTTCCGNTGAGAGGCAAAGGCCTTAACTTTTTTCGTNTG
rJMSF015I24+ CCTTGGTTCAACTCCCCAGATTTTCCGGTGAGAGGCAAAGGCCTTAACTTTTTTCGTTTG
                      ____________________________________________________________
consensus CCTTGGTTCAACTCCCCAGATTTTCCGGTGAGAGGCAAAGGCCTTAACTTTTTTCGTTTG
 
. : . : . : . : . : . :
rJMFF039E18+ GAACATATAATGCCATCTGTCTCACAAGTCGTTCTTGCAGCATTCCACTTTCATTGTTCT
rJMFF011J04+ GAACATATAATGCCATCTGTCTCACAAGTCGTTCTTGCAGCATTCCACTTTCATTGTTCT
rJMSF005E01+ GAACATATAATGCCATNTGTCTCACAAGTCGTTCNNGCAGCATTCCACTTTCATTGTTCT
rJMSF015I24+ GAACATATAATGCCATCTGTCTCACAAGTCGTTCTTGCAGCATTCCACTTTCATTGTTCT
                      ____________________________________________________________
consensus GAACATATAATGCCATCTGTCTCACAAGTCGTTCTTGCAGCATTCCACTTTCATTGTTCT
 
. : . : . : . : . : . :
rJMFF039E18+ TGCTACAATTAGTCAGTTTTCTTGCAGTAATCTCAATT
rJMFF011J04+ TGCTACAATTAGTCAGTTTTCTTGCAGTAATCTCAATTGTACATTCCA
rJMSF005E01+ TGCTACAATTAGTCAGTTTTCT
rJMSF015I24+ TGCTACAATTAGTCAGTTTTCTTGCAGTAATCTCAATTGTACATTCCATTTTCATGAAGT
                      ____________________________________________________________
consensus TGCTACAATTAGTCAGTTTTCTTGCAGTAATCTCAATTGTACATTCCATTTTCATGAAGT
 
. : . : . : . : . : . :
rJMSF015I24+ ATTAGTGTATATACTGTAACATTATGCATGGTGAACAGTAGGGTAATGCTTCTTGTGTTA
                      ____________________________________________________________
consensus ATTAGTGTATATACTGTAACATTATGCATGGTGAACAGTAGGGTAATGCTTCTTGTGTTA
 
. : . : . : . : . : . :
rJMSF015I24+ AGTGCATGGTTTTGTGCTGGGGTTTTTGCTTTTACTTGGAAAAATTGCTTACTGCTCTGC
                      ____________________________________________________________
consensus AGTGCATGGTTTTGTGCTGGGGTTTTTGCTTTTACTTGGAAAAATTGCTTACTGCTCTGC
 
. : . : . : . : . : . :
rJMSF015I24+ AAGAGTGGTTGGATTTGCAGAATTTCTGCAGTTTGAAACTCAATGTTCAGGTTGCAAGAT
                      ____________________________________________________________
consensus AAGAGTGGTTGGATTTGCAGAATTTCTGCAGTTTGAAACTCAATGTTCAGGTTGCAAGAT
 
. : . : . : . : . : . :
rJMSF015I24+ TTAGTATCTGAAATACTTCTCTTGAGAAGAAGAGAACATGAAACCAATGTGCTGGAAGTT
                      ____________________________________________________________
consensus TTAGTATCTGAAATACTTCTCTTGAGAAGAAGAGAACATGAAACCAATGTGCTGGAAGTT