Contig 001305:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF025F11+                             CACGAGGCAGAGCAAAATGTGCAAATGATGAGGACATATTT
                      ____________________________________________________________
consensus                                CACGAGGCAGAGCAAAATGTGCAAATGATGAGGACATATTT
 
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rJMSF025F11+          AATGAGAAAGCTGCTAATTTGGTTTATGACATGATGAGGGAATGCATGCAGCCAATTGAG
                      ____________________________________________________________
consensus             AATGAGAAAGCTGCTAATTTGGTTTATGACATGATGAGGGAATGCATGCAGCCAATTGAG
 
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rJMSF025F11+          TCTATACCATTTCATGAAATTGTTTGCTTCAAGGATGTTGATAAGCTTCAATCAGCTCTG
                      ____________________________________________________________
consensus             TCTATACCATTTCATGAAATTGTTTGCTTCAAGGATGTTGATAAGCTTCAATCAGCTCTG
 
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rJMSF025F11+          ACAGGTGACCCCAGGAGAAGAATCCAAAGTGACCTTCTGGAGTTCCAAAAAATACTCAAG
rJMSF011K17+                                                       CAAAAAATACTCAAG
                      ____________________________________________________________
consensus             ACAGGTGACCCCAGGAGAAGAATCCAAAGTGACCTTCTGGAGTTCCAAAAAATACTCAAG
 
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rJMSF025F11+          TGTAGTTGCTGCAGCAAGGGTGGTGTTTTGCTGTCACCATCCATGCATGATACCTCAATC
rJMSF011K17+          TGTAGTTGCTGCAGCAAGGGTGGTGTTTTGCTGTCACCATCCATGCATGATACCTCAATC
                      ____________________________________________________________
consensus             TGTAGTTGCTGCAGCAAGGGTGGTGTTTTGCTGTCACCATCCATGCATGATACCTCAATC
 
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rJMSF025F11+          ATGTATACCCTGGCGCAAGAGCATGGTGATCTCATCAACCTTCATGATTGGTTTCAGTCT
rJMSF011K17+          ATGTATACCCTGGCGCAAGAGCATGGTGATCTCATCAACCTTCATGATTGGTTTCAGTCT
                      ____________________________________________________________
consensus             ATGTATACCCTGGCGCAAGAGCATGGTGATCTCATCAACCTTCATGATTGGTTTCAGTCT
 
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rJMSF025F11+          TTTAATGCAACTGTTTCTTGCCTGAAACGATCAAAGCAGCTGTGTTCACCCAAAAAGAGA
rJMSF011K17+          TTTAATGCAACTGTTTCTTGCCTGAAACGATCAAAGCAGCTGTGTTCACCCAAAAAGAGA
                      ____________________________________________________________
consensus             TTTAATGCAACTGTTTCTTGCCTGAAACGATCAAAGCAGCTGTGTTCACCCAAAAAGAGA
 
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rJMSF025F11+          AAAGTTACTAATGTTCTTCAAAACAAATCTGATGCATCAATACAAGCAAGGTTTTGCAGG
rJMSF011K17+          AAAGTTACTAATGTTCTTCAAAACAAATCTGATGCATCAATACAAGCAAGGTTTTGCAGG
                      ____________________________________________________________
consensus             AAAGTTACTAATGTTCTTCAAAACAAATCTGATGCATCAATACAAGCAAGGTTTTGCAGG
 
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rJMSF025F11+          GCCATAATTGAGCTGCAGATAGCAGGTTTGCTTCGGGCACCCAGCAAAAGGCGCCCAGAT
rJMSF011K17+          GCCATAATTGAGCTGCAGATAGCAGGTTTGCTTCGGGCACCCAGCAAAAGGCGCCCAGAT
                      ____________________________________________________________
consensus             GCCATAATTGAGCTGCAGATAGCAGGTTTGCTTCGGGCACCCAGCAAAAGGCGCCCAGAT
 
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rJMSF025F11+          TATGTGCAGAGGGTAGCCTTTGGATTGTAACTTGGAATTTAGGTGATGGAGATCAACTCG
rJMSF011K17+          TATGTGCAGAGGGTAGCCTTTGGATTGTAACTTGGAATTTAGGTGATGGAGATCAACTCG
                      ____________________________________________________________
consensus             TATGTGCAGAGGGTAGCCTTTGGATTGTAACTTGGAATTTAGGTGATGGAGATCAACTCG
 
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rJMSF025F11+          ATTGATATATTGTGCAGTTGAAGAACTTTACCAGGAATCCATGCTTGCATAATTGCTACC
rJMSF011K17+          ATTGATATATTGTGCAGTTGAAGAACTTTACCAGGAATCCATGCTTGCATAATTGCTACC
                      ____________________________________________________________
consensus             ATTGATATATTGTGCAGTTGAAGAACTTTACCAGGAATCCATGCTTGCATAATTGCTACC
 
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rJMSF025F11+          TCTACCTGCTAAGAAAAGCACAAGACTGACTGCATGGTGGAGTGTTTCAATCCCAACACA
rJMSF011K17+          TCTACCTGCTAAGAAAAGCACAAGACTGACTGCATGGTGGAGTGTTTCAATCCCAACACA
                      ____________________________________________________________
consensus             TCTACCTGCTAAGAAAAGCACAAGACTGACTGCATGGTGGAGTGTTTCAATCCCAACACA
 
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rJMSF025F11+          TTTCTGTCAGGTGATGACTAGAAACTAACATTTGTTAAGCTGTGTATGTAGAGTTTTAAC
rJMSF011K17+          TTTCTGTCAGGTGATGACTAGAAACTAACATTTGTTAAGCTGTGTATGTAGAGTTTTAAC
                      ____________________________________________________________
consensus             TTTCTGTCAGGTGATGACTAGAAACTAACATTTGTTAAGCTGTGTATGTAGAGTTTTAAC
 
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rJMSF025F11+          AT                                                          
rJMSF011K17+          ATTCCAACTCTAGGTTTTACTGTAATTCTCCCTCTGAAACCTTTTGCCTCTTCCATAGTC
                      ____________________________________________________________
consensus             ATTCCAACTCTAGGTTTTACTGTAATTCTCCCTCTGAAACCTTTTGCCTCTTCCATAGTC
 
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rJMSF011K17+          ACCCTTCTTCTGCATTGTGAGTTCATAGTTTTCTCTTGCGCCGAGCAAAACCTGTTGTAT
                      ____________________________________________________________
consensus             ACCCTTCTTCTGCATTGTGAGTTCATAGTTTTCTCTTGCGCCGAGCAAAACCTGTTGTAT
 
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rJMSF011K17+          TAGTAGTAGTGTTCCTTTAAGATTCCGGGCTATAGCTTGAACCTTTGCTTTGTTATATCT
                      ____________________________________________________________
consensus             TAGTAGTAGTGTTCCTTTAAGATTCCGGGCTATAGCTTGAACCTTTGCTTTGTTATATCT