Contig 001295:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF029L04Sequence525001295 (6)ref|XP_004246762.1|4e-31PREDICTED: acyl-coenzyme A thioesterase 13 [Solanum lycopersicum]697001295 (6)ref|XP_010547868.1|5e-06PREDICTED: acyl-coenzyme A thioesterase 13 [Tarenaya hassleriana]
JMFN006N15Sequence615001295 (6)ref|XP_006365865.1|3e-26PREDICTED: DAG protein, chloroplastic-like [Solanum tuberosum]
JMSF009P21Sequence288022054679001295 (6)ref|XP_006365865.1|4e-94PREDICTED: DAG protein, chloroplastic-like [Solanum tuberosum]
JMSF012P16Sequence508001295 (6)ref|XP_004246762.1|1e-28PREDICTED: acyl-coenzyme A thioesterase 13 [Solanum lycopersicum]170001295 (6)

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF012P16- GGA
JMFF029L04- AAGAGATTCCTCGAGGGGGA
                      ____________________________________________________________
consensus AAGAGATTCCTCGAGGGGGA
 
. : . : . : . : . : . :
JMSF012P16- AGAAGGGAAGGAAAATGAATCTCCGGTGGTCGATTCCATGCCCTTCAAATTTCTGGAGCC
JMFF029L04- AGAAGGGAAGGAAAATGAATCTCCGGTGGTCGATTCCATGCCCTTCAAATTTCTGGAGCC
                      ____________________________________________________________
consensus AGAAGGGAAGGAAAATGAATCTCCGGTGGTCGATTCCATGCCCTTCAAATTTCTGGAGCC
 
. : . : . : . : . : . :
JMSF012P16- ATTAATCTGCCATGGATTGAAGATCGAGCTTGTGGAGCCCGATCGCGTCCTCTGCTCCTT
JMFF029L04- ATTAATCTGCCATGGATTGAAGATCGAGCTTGTGGAGCCCGATCGCATCCTCTGCTCCTT
                      ____________________________________________________________
consensus ATTAATCTGCCATGGATTGAAGATCGAGCTTGTGGAGCCCGATCGCGTCCTCTGCTCCTT
 
. : . : . : . : . : . :
JMSF012P16- CAAAGTCCCTCAACGTCTAGTGGTACCTACTCTTTTATTTCTTCTCAAAATTTTCAATTT
JMFF029L04- CAAAGTCCCTCAACGTCTAGTGGTACCTACTCTTTTATTTCTTCTCAAAATTTTCAATTT
rJMFF029L04+ ACTCTTTTATTTNTTCTCAAAATTTTCAATTT
                      ____________________________________________________________
consensus CAAAGTCCCTCAACGTCTAGTGGTACCTACTCTTTTATTTCTTCTCAAAATTTTCAATTT
 
. : . : . : . : . : . :
JMSF012P16- AGTTAAGGGCTTAATTCATGCGGGAATTTATCTGGAAGAGCAGAATTCCGACAATATATT
JMFF029L04- AGTTAAGGGCTTAATTCATGCGGGAATTTATCTGGAAGAGCAGAATTCCGACAATATATT
rJMFF029L04+ AGTTAAGGGCTTAATTCATGCGGGAATTTATCTGGAAGAGCAGAATTCCGACAATATATT
                      ____________________________________________________________
consensus AGTTAAGGGCTTAATTCATGCGGGAATTTATCTGGAAGAGCAGAATTCCGACAATATATT
 
. : . : . : . : . : . :
JMSF012P16- GCACGGCGGAGTGACGGCGGCGCTGGTGGACGTTATCGGTGCGGCGGCTGTGTTCGTGGG
JMFF029L04- GCACGGCGGAGTGACGGCGGCGCTGGTGGACGTTATCGGTGCGGCGGCTGTGTTCGTGGG
rJMFF029L04+ GCACGGCGGAGTGACGGCGGCGCTGGTGGACGTTATCGGTGCGGCGGCTGTGTTCGTGGG
                      ____________________________________________________________
consensus GCACGGCGGAGTGACGGCGGCGCTGGTGGACGTTATCGGTGCGGCGGCTGTGTTCGTGGG
 
. : . : . : . : . : . :
JMSF012P16- TGGTTCTCCGGAGACTGGGGTCTCCGTCGAGATCAACGTTTCCTATGTTGATGTTGCTTA
JMFF029L04- TGGTTCTCCGGAGACTGGGGTCTCCGTCGAGATCAACGTTTCCTATGTTGATGTTGCTTA
rJMFF029L04+ TGGTTNTCCGGAGACTGGGGTNTCCGTCGAGATCAACGTTTCCTATGTTGATGTTGCTTA
                      ____________________________________________________________
consensus TGGTTCTCCGGAGACTGGGGTCTCCGTCGAGATCAACGTTTCCTATGTTGATGTTGCTTA
 
. : . : . : . : . : . :
JMSF012P16- TACTGGCGTACGTGCTCCCTTTTCGTGCCATTTTTGCAGCTTATTTTGACCATTTTCATA
JMFF029L04- TACTGGCGTACGTGCTCCCTTTTCGTGCCATTTTTGCAGCTTATTTTGACCATTTTCATA
rJMFF029L04+ TACTGGCGTACGTGCTCCCTTTTCGTGCCATTTTTGCAGCTTATTTTGACCATTTTCATA
                      ____________________________________________________________
consensus TACTGGCGTACGTGCTCCCTTTTCGTGCCATTTTTGCAGCTTATTTTGACCATTTTCATA
 
. : . : . : . : . : . :
JMSF012P16- TCAATTGCTAAATATGTGGGTCATTTCTCATAATTCTTTTTGGCTCTCTATTAGCTATAA
JMFF029L04- TCAATTGCTAAATATGTGGGTCATTTCTCATAATTCTTTTTGGCTCTCTATTAGCTATAA
rJMFF029L04+ TCAATTGCTAAATATGTGGGTCATTTNTCATAATTCTTTTTGGCTCTNTATTAGCTATAA
                      ____________________________________________________________
consensus TCAATTGCTAAATATGTGGGTCATTTCTCATAATTCTTTTTGGCTCTCTATTAGCTATAA
 
. : . : . : . : . : . :
JMSF012P16- CAAAATTTTATCTGATCAACGTCAA
JMFF029L04- CNNAATTTTATCTGATCAACGTCAA
rJMFF029L04+ CAAAATTTTATNTGATCAACGTCAATTTGAGCATCATTTGCCCAGGTTAATTTGAAATTT
                      ____________________________________________________________
consensus CAAAATTTTATCTGATCAACGTCAATTTGAGCATCATTTGCCCAGGTTAATTTGAAATTT
 
. : . : . : . : . : . :
rJMSF012P16+ AAAAAAANAACAATAATTGCTTTGTCACTATTATT
rJMFF029L04+ TTTTTTAAAGGAATTTGAATTGTTTAAAAAAAAAACAATAATTGCTTTGTCACTATTATT
                      ____________________________________________________________
consensus TTTTTTAAAGGAATTTGAATTGTTTAAAAAAAAAACAATAATTGCTTTGTCACTATTATT
 
. : . : . : . : . : . :
rJMSF012P16+ TGAGTNCNTTANCTCCAGGTGAAGTNGTAGTGTAGCGTNGTNCCATATATGCCTGTTCTA
rJMFF029L04+ TGAGTGCTTTAATTCCAGGTGAAGTTGTAGTGTAGTGTTGTACCATATATGCCTGTTCTA
                      ____________________________________________________________
consensus TGAGTGCTTTAATTCCAGGTGAAGTTGTAGTGTAGTGTTGTACCATATATGCCTGTTCTA
 
. : . : . : . : . : . :
rJMSF012P16+ ACCCGGGTGACATAGAGATTCGAAGCAT
rJMFF029L04+ ACCCGGGTGACATAGAGATTCGAAGCATGTGCTCCATCTAAACTAAAAGTCTAAGCTGAT
JMFN006N15+ AAGCATGTGCTTCATCTCAACTAAAAGTCTAAGCTGAT
                      ____________________________________________________________
consensus ACCCGGGTGACATAGAGATTCGAAGCATGTGCTTCATCTCAACTAAAAGTCTAAGCTGAT
 
. : . : . : . : . : . :
rJMFF029L04+ AGTTGGATTGTACATTAATATTTATATGCTCAACA
JMFN006N15+ AGTTGGATTGTACATTAATGGTTATATGCTCAACAAGAGGTAGCATGGGTTTGTCCTACC
                      ____________________________________________________________
consensus AGTTGGATTGTACATTAATGTTTATATGCTCAACAAGAGGTAGCATGGGTTTGTCCTACC
 
. : . : . : . : . : . :
JMFN006N15+ AAGCAATAAAAGAGAATCAAAGCATACCAATAAGGTTCTAGGAGGAAGATTCAGGAGTGG
rJMSF009P21- TACCAATAAGGTTCTAGGAGGAAGATTCAGGAGTGG
                      ____________________________________________________________
consensus AAGCAATAAAAGAGAATCAAAGCATACCAATAAGGTTCTAGGAGGAAGATTCAGGAGTGG
 
. : . : . : . : . : . :
JMFN006N15+ CTTCCTGTCTCCGCCTTTCAGGAGCAGGAGCAGGACCATCTCTTCTTCTCACATATGCTT
rJMSF009P21- CTTCCTGTCTCCGCCTTTCAGGAGCAGGAGCAGGACCATCTCTTCTTCTCACATATGCTT
                      ____________________________________________________________
consensus CTTCCTGTCTCCGCCTTTCAGGAGCAGGAGCAGGACCATCTCTTCTTCTCACATATGCTT
 
. : . : . : . : . : . :
JMFN006N15+ TACTCTTGCTTTTTGGGCGGTTAGCCTGCTTGGGTTGGTATGTAGGGTACTGGCAAGGAA
rJMSF009P21- TACTCTTGCTTTTTGGGCGGTTAGCCTGCTTGGGTTGGTATGTAGGGTACTGGCAAGGAA
                      ____________________________________________________________
consensus TACTCTTGCTTTTTGGGCGGTTAGCCTGCTTGGGTTGGTATGTAGGGTACTGGCAAGGAA
 
. : . : . : . : . : . :
JMFN006N15+ TTATCTCTCCATTGATGTACTTATCCCCT
rJMSF009P21- TTATCTCTCCATTGATGTACTTATCCCCTCCATAATCCTTGTTCTTGACATCTATATAAG
                      ____________________________________________________________
consensus TTATCTCTCCATTGATGTACTTATCCCCTCCATAATCCTTGTTCTTGACATCTATATAAG
 
. : . : . : . : . : . :
rJMSF009P21- AATCAGGCAAGACCCACAAAACTCCAGGTAATCCCTTAAACTTCTCAGATGTTTCTTCAG
                      ____________________________________________________________
consensus AATCAGGCAAGACCCACAAAACTCCAGGTAATCCCTTAAACTTCTCAGATGTTTCTTCAG
 
. : . : . : . : . : . :
rJMSF009P21- ATACAGTGCATTGGAATCCCGTGTAAGTGGTTGTACTAAAAGCATACATGTTCTTCTTTG
                      ____________________________________________________________
consensus ATACAGTGCATTGGAATCCCGTGTAAGTGGTTGTACTAAAAGCATACATGTTCTTCTTTG
 
. : . : . : . : . : . :
rJMSF009P21- CTTCTTCCATACTGCCAAGAACAGTGGCAAGGGTATCTAGATAAGTGTCAATCATTTGCT
                      ____________________________________________________________
consensus CTTCTTCCATACTGCCAAGAACAGTGGCAAGGGTATCTAGATAAGTGTCAATCATTTGCT
 
. : . : . : . : . : . :
rJMSF009P21- CTCTAGTAGGGGCGGGGTCTTTGGGGAACTCCATGACAATAAGCCAGTGGTTGTAGTCGC
                      ____________________________________________________________
consensus CTCTAGTAGGGGCGGGGTCTTTGGGGAACTCCATGACAATAAGCCAGTGGTTGTAGTCGC