Contig 001273:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF003P03Sequence326014567ref|XP_009802332.1|4e-22PREDICTED: mitogen-activated protein kinase 9-like isoform X2 [Nicotiana sylves762001273 (2)ref|XP_009802328.1|4e-04PREDICTED: mitogen-activated protein kinase 9-like isoform X1 [Nicotiana sylves
JMSF036M16Sequence616003788 (2)ref|XP_009594807.1|6e-37PREDICTED: mitogen-activated protein kinase 9-like [Nicotiana tomentosiformis]760001273 (2)ref|XP_009791183.1|6e-05PREDICTED: mitogen-activated protein kinase 9-like [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF036M16+ TCACTGTAAACCAANCACCAGTGAGCGTTGCTTACTAAGAAGTTCCAGCATTAGCTT
rJMSF003P03+ CAGTGAGCGTTGCTTACTAAGAAGTTCCAGCATTAGCTT
                      ____________________________________________________________
consensus TCACTGTAAACCAANCACCAGTGAGCGTTGCTTACTAAGAAGTTCCAGCATTAGCTT
 
. : . : . : . : . : . :
rJMSF036M16+ TTCCAAGTGTGTCGGTGCCATATGGCAGGACAGCGAGGTAAGTGTCGCCTAATCCGTTAC
rJMSF003P03+ TTCCAAGTGTGTCGGTGCCATATGGCAGGACAGCGAGGTAAGTGTCGCCTAATCCGTTAC
                      ____________________________________________________________
consensus TTCCAAGTGTGTCGGTGCCATATGGCAGGACAGCGAGGTAAGTGTCGCCTAATCCGTTAC
 
. : . : . : . : . : . :
rJMSF036M16+ CCGTTATACATATACCCTTGCAAAGAAAATTGAAGAAAACTTCTAAAATCCCAAATACCA
rJMSF003P03+ CCGTTATACATATACCCTTGCAAAGAAAATTGAAGAAAACTTCTAAAATCCCAAATACCA
                      ____________________________________________________________
consensus CCGTTATACATATACCCTTGCAAAGAAAATTGAAGAAAACTTCTAAAATCCCAAATACCA
 
. : . : . : . : . : . :
rJMSF036M16+ TTAGTTTATTTCTTGTCCCCATCCATACTGAAGGATCGAGGCATCACCCTTTGCTTCCTT
rJMSF003P03+ TTAGTTTATTTCTTGTCCCCATCCATACTGAAGGATCGAGGCATCACCCTTTGCTTCCTT
                      ____________________________________________________________
consensus TTAGTTTATTTCTTGTCCCCATCCATACTGAAGGATCGAGGCATCACCCTTTGCTTCCTT
 
. : . : . : . : . : . :
rJMSF036M16+ CACGACAGAGTGAAAGCGACTTTTGTAAATTGTTCATGATCTTTAGTAATAGTATTAGCG
rJMSF003P03+ CACGACAGAGTGAAAGCGACTTTTGTAAATTGTTCATGATCTTTAGTAATAGTATTAGCG
                      ____________________________________________________________
consensus CACGACAGAGTGAAAGCGACTTTTGTAAATTGTTCATGATCTTTAGTAATAGTATTAGCG
 
. : . : . : . : . : . :
rJMSF036M16+ GTCGAAGATGGAAGCTAGGGATAATAGCCGGTGTAAGATTTTCATTACTGTCGTATATAT
rJMSF003P03+ GTCGAAGATGGAAGCTAGGGATAATAGCCGGTGTAAGATTTTCATTACTGTCGTATATAT
                      ____________________________________________________________
consensus GTCGAAGATGGAAGCTAGGGATAATAGCCGGTGTAAGATTTTCATTACTGTCGTATATAT
 
. : . : . : . : . : . :
rJMSF036M16+ CTGCCTTTATCCCAGGGTACAGCTTGCAAGCAAAATGAGATCAGTAGATCGTCAAAGGAG
rJMSF003P03+ CTGCCTTTATCCCAGGGTACAGCTTGCAAGCAAAATGAGATCAGTAGATCGTCAAAGGAG
                      ____________________________________________________________
consensus CTGCCTTTATCCCAGGGTACAGCTTGCAAGCAAAATGAGATCAGTAGATCGTCAAAGGAG
 
. : . : . : . : . : . :
rJMSF036M16+ CTGGCTGCTTGCAAGCAATATGACAATGGGATTGGTAGATCGCCAAAGGAGCTAACAGCT
rJMSF003P03+ CTGGCTGCTTGCAAGCAATATGACAATGGGATTGGTAGATCGCCAAAGGAGCTAACAGCT
                      ____________________________________________________________
consensus CTGGCTGCTTGCAAGCAATATGACAATGGGATTGGTAGATCGCCAAAGGAGCTAACAGCT
 
. : . : . : . : . : . :
rJMSF036M16+ TTGTATGCTTGATTCTTCAATATGGATGGATGGATGGATGGAAGTTTTAACTTCTTTCTA
rJMSF003P03+ TTGTATGCTTGATTCTTCAATATGGATGGATGGATGGATGGAAGTTTTAACTTCTTTCTA
                      ____________________________________________________________
consensus TTGTATGCTTGATTCTTCAATATGGATGGATGGATGGATGGAAGTTTTAACTTCTTTCTA
 
. : . : . : . : . : . :
rJMSF036M16+ ATTCCTGGTAATTTAAACCTTTTTATGTTGTGTTGTACTATTGATGCGACTATGATGTTG
rJMSF003P03+ ATTCCTGGTAATTTAAACCTTTTTATGTTGTGTTGTACTATTGATGCGACTATGATGTTG
                      ____________________________________________________________
consensus ATTCCTGGTAATTTAAACCTTTTTATGTTGTGTTGTACTATTGATGCGACTATGATGTTG
 
. : . : . : . : . : . :
rJMSF036M16+ GCAACCTTATATGCTCCTATAGCCGTCGCTACTTAGTGCTGTATGCCTTTATACTATGGT
rJMSF003P03+ GCAACCTTATATGCTCCTATAGCCATCGCTACTTAGTGCTGTATGCCTTTATACTATGGT
                      ____________________________________________________________
consensus GCAACCTTATATGCTCCTATAGCCGTCGCTACTTAGTGCTGTATGCCTTTATACTATGGT
 
. : . : . : . : . : . :
rJMSF036M16+ TGGCGCTTACTGCTCTTCTATCGACGATTATTATGTGCTCCCCCCTCCGTATCTTGCTTC
rJMSF003P03+ TGGCGCTTACTGCTCTTCTATCGACGATTATTATGTGCTCCCCCCTCCGTATCTTGCTTC
                      ____________________________________________________________
consensus TGGCGCTTACTGCTCTTCTATCGACGATTATTATGTGCTCCCCCCTCCGTATCTTGCTTC
 
. : . : . : . : . : . :
rJMSF036M16+ GGTTGTAATGCTCTGATGAAGTTGTAATTAGTGTT
rJMSF003P03+ GGTTGTAATGCTCTGATGAAGTTGTAATTAGTGTTTGTCTCAATAGTAAATGCTACATTC
                      ____________________________________________________________
consensus GGTTGTAATGCTCTGATGAAGTTGTAATTAGTGTTTGTCTCAATAGTAAATGCTACATTC