Contig 001272:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF040G01+                                    GAGGTGATTTTGGCCGATGGACAGATTACGAANG
                      ____________________________________________________________
consensus                                       GAGGTGATTTTGGCCGATGGACAGATTACGAANG
 
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rJMSF040G01+          ATGAGGATGGAGCAACTCAATGACTTGCAGAAGAAAGTTGGCTTGCCGCCCCCTTATGCT
                      ____________________________________________________________
consensus             ATGAGGATGGAGCAACTCAATGACTTGCAGAAGAAAGTTGGCTTGCCGCCCCCTTATGCT
 
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rJMSF040G01+          CAAAAGATTATCAAGAACATAACAACTTNTAAGCTGTCGGGTGTCCTCGAAACTGCTGTT
rJMSF003N13+                                                        TCGAAACTGCTGTT
                      ____________________________________________________________
consensus             CAAAAGATTATCAAGAACATAACAACTTNTAAGCTGTCGGGTGTCCTCGAAACTGCTGTT
 
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rJMSF040G01+          GGTCAGGGAAGGATAAGTATGAAGGAAATTAGAGAATTGAGGGAAGCTGGAGTTGAAATA
rJMSF003N13+          GGTCAGGGAAGGATAAGTATGAAGGAAATTAGAGAATTGAGGGAAGCTGGAGTTGAAATA
                      ____________________________________________________________
consensus             GGTCAGGGAAGGATAAGTATGAAGGAAATTAGAGAATTGAGGGAAGCTGGAGTTGAAATA
 
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rJMSF040G01+          AACACTATGGTCTCTGAAAGCTTACGCGAAAACCTGTTCAAAAAAGCAGTGGATGATATG
rJMSF003N13+          AACACTATGGTCTCTGAAAGCTTACGCGAAAACCTGTTCAAAAAAGCAGTGGATGATATG
                      ____________________________________________________________
consensus             AACACTATGGTCTCTGAAAGCTTACGCGAAAACCTGTTCAAAAAAGCAGTGGATGATATG
 
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rJMSF040G01+          TTCTCATCTGGTACTGGTGAGTTTGATGAAGAAGAAGTGTATGAGAAGATGCCTGCAGAT
rJMSF032G03+                       CTGGNGAGTNTGATGAAGAAGAAGTGTATGAGAAGATGCNTGCAGAT
rJMSF003N13+          TTCTCATCTGGTACTGGTGAGTTTGATGAAGAAGAAGTGTATGAGAAGATGCCTGCAGAT
                      ____________________________________________________________
consensus             TTCTCATCTGGTACTGGTGAGTTTGATGAAGAAGAAGTGTATGAGAAGATGCCTGCAGAT
 
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rJMSF040G01+          CTGAGTATTAATGCTGAGAAGGCCAAAGCGGTTGTGCAGCAACTCGCACGAGCTAGATTG
rJMSF032G03+          CTGAGTATTAATGCTGAGGAGGCCAAAGCGGTTGTGCAGCAACTCGCACGAGCTAGATTG
rJMSF003N13+          CTGAGTATTAATGCTGAGAAGGCCAAAGCGGTTGTGCAGCAACTCGCACGAGCTAGATTG
                      ____________________________________________________________
consensus             CTGAGTATTAATGCTGAGAAGGCCAAAGCGGTTGTGCAGCAACTCGCACGAGCTAGATTG
 
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rJMSF040G01+          TCAAATTCACTTGTTCAGGCTGTGGCACTTCTAAGGCAGAGAAACCAGAAAGGAGTGGTT
rJMSF032G03+          TCAAATTCACTTGTTCAGGCTGTGGCACTTCTAAGGCAGAGAAACCAGAAAGGAGTGGTT
rJMSF003N13+          TCAAATTCACTTGTTCAGGCTGTGGCACTTCTAAGGCAGAGAAACCAGAAAGGAGTGGTT
                      ____________________________________________________________
consensus             TCAAATTCACTTGTTCAGGCTGTGGCACTTCTAAGGCAGAGAAACCAGAAAGGAGTGGTT
 
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rJMSF040G01+          TCCTCGCTCAATAACTTGTTAGCCTGTGACAAGGTTGTACCTTCAACCCCATTATCATGG
rJMSF032G03+          TCCTCGCTCAATAACTTGTTAGCCTGTGACAAGGTTGTACCTTCAACCCCATTATCATGG
rJMSF003N13+          TCCTCGCTCAATAACTTGTTAGCCTGTGACAAGGTTGTACCTTCAACCCCATTATCATGG
                      ____________________________________________________________
consensus             TCCTCGCTCAATAACTTGTTAGCCTGTGACAAGGTTGTACCTTCAACCCCATTATCATGG
 
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rJMSF040G01+          GAGGTGCCCGAGGAACTTGATGATCTCTTCCTGATATATCTTAAGAGTGACCCAGCACCC
rJMSF032G03+          GAGGTGCCCGAGGAACTTGATGATCTCTTCCTGATATATCTTAAGAGTGACCCAGCACCC
rJMSF003N13+          GAGGTGCCCGAGGAACTTGATGATCTCTTCCTGATATATCTTAAGAGTGACCCAGCACCC
                      ____________________________________________________________
consensus             GAGGTGCCCGAGGAACTTGATGATCTCTTCCTGATATATCTTAAGAGTGACCCAGCACCC
 
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rJMSF040G01+          GAGAGGCTCTCGAGGTTACAATACTTGCTGGATATAAGTGATTCAAAGGCGGACACTCTA
rJMSF032G03+          GAGAGGCTCTCGAGGTTACAATACTTGCTGGATATAAGTGATTCAAAGGCGGACACTCTA
rJMSF003N13+          GAGAGGCTCTCGAGGTTACAATACTTGCTGGATATAAGTGATTCAAAGGCGGACACTCTA
                      ____________________________________________________________
consensus             GAGAGGCTCTCGAGGTTACAATACTTGCTGGATATAAGTGATTCAAAGGCGGACACTCTA
 
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rJMSF040G01+          AAAGAGTTGAAGGATAGAGCAGTGCCAAATGAAGCCGAAGAGGAAGAGTTTGTTTTTTGA
rJMSF032G03+          AAAGAGTTGAAGGATAGAGCAGTGCCAAATGAAGCCGAAGAGGAAGAGTTTGTTTTTTGA
rJMSF003N13+          AAAGAGTTGAAGGATAGAGCAGTGCCAAATGAAGCCGAAGAGGAAGAGTTTGTTTTTTGA
                      ____________________________________________________________
consensus             AAAGAGTTGAAGGATAGAGCAGTGCCAAATGAAGCCGAAGAGGAAGAGTTTGTTTTTTGA
 
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rJMSF040G01+          ATCTGCCATCACTTTAGCAGCAGAGAACTAGTGTTAGTAGCATGAATTGTTTACCACCAG
rJMSF032G03+          ATCTGCCATCACTTTAGCAGCAGAGAACTAGTGTTAGTAGCATGAATTGTTTACCACCAG
rJMSF003N13+          ATCTGCCATCACTTTAGCAGCAGAGAACTAGTGTTAGTAGCATGAATTGTTTACCACCAG
                      ____________________________________________________________
consensus             ATCTGCCATCACTTTAGCAGCAGAGAACTAGTGTTAGTAGCATGAATTGTTTACCACCAG
 
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rJMSF040G01+          ATGTCACATCACAGTTTTGTAATATAACACTAGGATGCTGTTCTTAATTTTCACCGATTC
rJMSF032G03+          ATGTCACATCACAGTTTTGTAATATAACACTAGGATGCTGTTCTTAATTTTCACCGATTC
rJMSF003N13+          ATGTCACATCACAGTTTTGTAATATAACACTAGGATGCTGTTCTTAATTTTCACCGATTC
                      ____________________________________________________________
consensus             ATGTCACATCACAGTTTTGTAATATAACACTAGGATGCTGTTCTTAATTTTCACCGATTC
 
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rJMSF040G01+          CTCTTTTTCAACTTCGTGAAGAAACATTTATGTTTATTTAAAATGATAGA          
rJMSF032G03+          CTCTTTTTCAACTTCGTGAAGAAACATTTATGTTTATTTAAAATGATAGA          
rJMSF003N13+          CTCTTTTTCAACTTCGTGAAGAAACATTTATGTTTATTTAAAATGATAGATTGTAAGGAG
                      ____________________________________________________________
consensus             CTCTTTTTCAACTTCGTGAAGAAACATTTATGTTTATTTAAAATGATAGATTGTAAGGAG