Contig 001267:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF040N20Sequence288006634 (6)ref|XP_010101382.1|2e-04Protein IQ-DOMAIN 14 [Morus notabilis] gb|EXB88329.1| Protein IQ-DOMAIN 14 [Moru489001267 (6)emb|CDP10875.1|9e-49unnamed protein product [Coffea canephora]
JMSF002M08Sequence227006634 (6)707001267 (6)emb|CDP10875.1|3e-64unnamed protein product [Coffea canephora]
JMSF013J03Sequence248006634 (6)745001267 (6)emb|CDP10875.1|2e-68unnamed protein product [Coffea canephora]
JMSF017P04Sequence489006634 (6)ref|XP_006366143.1|5e-26PREDICTED: protein IQ-DOMAIN 14-like [Solanum tuberosum]745001267 (6)emb|CDP10875.1|2e-68unnamed protein product [Coffea canephora]
JMSF038H06Sequence683006634 (6)ref|XP_006366143.1|2e-28PREDICTED: protein IQ-DOMAIN 14-like [Solanum tuberosum]886001267 (6)emb|CDP10875.1|5e-80unnamed protein product [Coffea canephora]
JMSF050D11Sequence701006634 (6)ref|XP_004244759.1|2e-16PREDICTED: protein IQ-DOMAIN 14 [Solanum lycopersicum]727001267 (6)emb|CDP10875.1|2e-68unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF038H06+ CCGATCCAGTGGGATACCCGTGGTGGTGGAACTGGTTAGAACGCCAG
                      ____________________________________________________________
consensus CCGATCCAGTGGGATACCCGTGGTGGTGGAACTGGTTAGAACGCCAG
 
. : . : . : . : . : . :
rJMSF013J03+ TGCTGTG
rJMSF017P04+ TGCTGTG
rJMSF038H06+ CTGCCTCCTCCTGCAGCAGCAGCAGCAGCCGCCAATCCTTCAGAAAACCAGTCTGCTGTG
rJMSF050D11+ TGCTGTG
                      ____________________________________________________________
consensus CTGCCTCCTCCTGCAGCAGCAGCAGCAGCCGCCAATCCTTCAGAAAACCAGTCTGCTGTG
 
. : . : . : . : . : . :
rJMSF013J03+ AAAAATGTCCACCTAACACCACCTAGGCCGGTATCAGACCGCAAACCACCTAGTCCTCGA
rJMSF017P04+ AAAAATGTCCACCTAACACCACCTAGGCCGGTATCAGACCGCAAACCACCTAGTCCTCGA
rJMSF038H06+ AAAAATGTCCACCTAACACCACCTAGGCCGGTATCAGACCGCAAACCACCTAGTCCTCGA
rJMSF050D11+ AAAAATGTCCACCTAACACCACCTAGGCCGGTATCAGACCGCAAACCACCTAGTCCTCGA
rJMSF002M08+ TAACACCACCTAGGCCGGTATCAGACCGCAAACCACCTAGTCCTCGA
                      ____________________________________________________________
consensus AAAAATGTCCACCTAACACCACCTAGGCCGGTATCAGACCGCAAACCACCTAGTCCTCGA
 
. : . : . : . : . : . :
rJMSF013J03+ CTTCCAGCTACCAACTTCAAACCCCAAAACAGTGGATACGACAATCACGAAGCAGGCACA
rJMSF017P04+ CTTCCAGCTACCAACTTCAAACCCCAAAACAGTGGATACGACAATCACGAAGCAGGCACA
rJMSF038H06+ CTTCCAGCTACCAACTTCAAACCCCAAAACAGTGGATACGACAATCACGAAGCAGGCACA
rJMSF050D11+ CTTCCAGCTACCAACTTCAAACCCCAAAACAGTGGATACGACAATCACGAAGCAGGCACA
rJMSF002M08+ CTTCCAGCTACCAACTTCAAACCCCAAAACAGTGGATACGACAATCACGAAGCAGGCACA
                      ____________________________________________________________
consensus CTTCCAGCTACCAACTTCAAACCCCAAAACAGTGGATACGACAATCACGAAGCAGGCACA
 
. : . : . : . : . : . :
rJMSF013J03+ CCAACATCCTCAAAATCTGCAGTTCCTGTGAGAGGCAAACAGTTCAGCACTCCTGGCAGA
rJMSF017P04+ CCAACATCCTCAAAATCTGCAGTTCCTGTGAGAGGCAAACAGTTCAGCACTCCTGGCAGA
rJMSF038H06+ CCAACATCCTCAAAATCTGCAGTTCCTGTGAGAGGCAAACAGTTCAGCACTCCTGGCAGA
rJMSF050D11+ CCAACATCCTCAAAATCTGCAGTTCCTGTGAGAGGCAAACAGTTCAGCACTCCTGGCAGA
rJMSF002M08+ CCAACATCCTCAAAATCTGCAGTTCCTGTGAGAGGCAAACAGTTCAGCACTCCTGGCAGA
                      ____________________________________________________________
consensus CCAACATCCTCAAAATCTGCAGTTCCTGTGAGAGGCAAACAGTTCAGCACTCCTGGCAGA
 
. : . : . : . : . : . :
rJMSF013J03+ ACAACCCCGCCCAGCTCGAGTTTAGCCAAATTGATGCAACCTAGAGGCAGTGGCATTCGT
rJMSF017P04+ ACAACCCCGCCCAGCTCGAGTTTAGCCAAATTGATGCAACCTAGAGGCAGTGGCATTCGT
rJMSF038H06+ ACAACCCCGCCCAGCTCGAGTTTAGCCAAATTGATGCAACCTAGAGGCAGTGGCATTCGT
rJMSF050D11+ ACAACCCCGCCCAGCTCGAGTTTAGCCAAATTGATGCAACCTAGAGGCAGTGGCATTCGT
rJMFF040N20+ CCAGCTCGAGTTTAGCCAAATTGATGCAACCTAGAGGCAGTGGCATTNGT
rJMSF002M08+ ACAACCCCGCCCAGCTCGAGTTTAGCCAAATTGATGCAACCTAGAGGCAGTGGCATTCGT
                      ____________________________________________________________
consensus ACAACCCCGCCCAGCTCGAGTTTAGCCAAATTGATGCAACCTAGAGGCAGTGGCATTCGT
 
. : . : . : . : . : . :
rJMSF013J03+ TCCCCTTTCGACTTCCCCTTGAAGGACGACGATAGCCTAACAAGCTGCCCTCCATTCTCG
rJMSF017P04+ TCCCCTTTCGACTTCCCCTTGAAGGACGACGATAGCCTAACAAGCTGCCCTCCATTCTCG
rJMSF038H06+ TCCCCTTTCGACTTCCCCTTGAAGGACGACGATAGCCTAACAAGCTGCCCTCCATTCTCG
rJMSF050D11+ TCCCCTTTCGACTTCCCCTTGAAGGACGACGATAGCCTAACAAGCTGCCCTCCATTCTCG
rJMFF040N20+ TCCCCTTTCGACTTCCCCTTGAAGGACGACGATAGCCTAACAAGCTGCCCTCCATTCTCG
rJMSF002M08+ TCCCCTTTCGACTTCCCCTTGAAGGACGACGATAGCCTAACAAGCTGCCCTCCATTCTCG
                      ____________________________________________________________
consensus TCCCCTTTCGACTTCCCCTTGAAGGACGACGATAGCCTAACAAGCTGCCCTCCATTCTCG
 
. : . : . : . : . : . :
rJMSF013J03+ GTCCCAAGTTACATGGCGCCTACCGTCTCTGCCAAGGCCAAAGCAAGAGCAAGTAGCAAC
rJMSF017P04+ GTCCCAAGTTACATGGCGCCTACCGTCTCTGCCAAGGCCAAAGCAAGAGCAAGTAGCAAC
rJMSF038H06+ GTCCCAAGTTACATGGCGCCTACCGTCTCTGCCAAGGCCNAAGCAAGAGCAAGTAGCAAC
rJMSF050D11+ GTCCCAAGTTACATGGCGCCTACCGTCTCTGCCAAGGCCAAAGCAAGAGCAAGTAGCAAC
rJMFF040N20+ GTCCCAAGTTACATGGCGCCTACCGTCTCTGCCAAGGCCAAAGCAAGAGCAAGTAGCAAC
rJMSF002M08+ GTCCCAAGTTACATGGCGCCTACCGTCTCTGCCAAGGCCAAAGCAAGAGCAAGTAGCAAC
                      ____________________________________________________________
consensus GTCCCAAGTTACATGGCGCCTACCGTCTCTGCCAAGGCCAAAGCAAGAGCAAGTAGCAAC
 
. : . : . : . : . : . :
rJMSF013J03+ CCGAGGGAGAGAAGTACAAGTAGTGCTGCAGGAACACCGACAAATGACTCAAAGCGGAGG
rJMSF017P04+ CCGAGGGAGAGGAGTACAAGTAGTGCTGCAGGAACACCGACAAATGACTCAAAGCGGAGG
rJMSF038H06+ CCGAGGGAGAGAAGTACAAGTAGTGCTGCAGGAACACCGACAAATGACTCAAAGCGGAGG
rJMSF050D11+ CCGAGGGAGAGAAGTACAAGTAGTGCTGCAGGAACACCGACAAATGACTCAAAGCGGAGG
rJMFF040N20+ CCGAGGGAGAGAAGTACAAGTAGTGCTGCAGGAACACCGACAAATGACTCAAAGCGGAGG
rJMSF002M08+ CCGAGGGAGAGAAGTACAAGTAGTGCTGCAGGAACACCGACAAATGACTCAAAGCGGAGG
                      ____________________________________________________________
consensus CCGAGGGAGAGAAGTACAAGTAGTGCTGCAGGAACACCGACAAATGACTCAAAGCGGAGG
 
. : . : . : . : . : . :
rJMSF013J03+ TTTTCCTTTCCCTTGACCCCGAATATCGCATCTTTCAAGTGGAACAGAGGCTCCAGCAAA
rJMSF017P04+ TTTTCCTTTCCCTTGACCCCGAATATCGCATCTTTCAAGTGGAACAGAGGCTCCAGCAAA
rJMSF038H06+ TTTTCCTTTCCCTTGACCCCGAATATCGCATCTTTCAAGTGGAACAGAGGCTCCAGCAAA
rJMSF050D11+ TTTTCCTTTCCCTTGACCCCGAATATCGCATCTTTCAAGTGGAACAGAGGCTCCAGCAAA
rJMFF040N20+ TTTTCCTTTCCCTTGACCCCGAATATCGCATCTTTCAAGTGGAACAGAGGCTCCAGCAAA
rJMSF002M08+ TTTTCCTTTCCCTTGACCCCGAATATCGCATCTTTCAAGTGGAACAGAGGCTCCAGCAAA
                      ____________________________________________________________
consensus TTTTCCTTTCCCTTGACCCCGAATATCGCATCTTTCAAGTGGAACAGAGGCTCCAGCAAA
 
. : . : . : . : . : . :
rJMSF013J03+ GATCCTACTACTCCTCAAAGGGAAACAGAGAAGCAAGGTGGAGATGGAGTGAGTGTGGAT
rJMSF017P04+ GATCCTACTACTCCTCAAAGGGAAACAGAGAAGCAAGGTGGAGATGGAGTGAGTGTGGAT
rJMSF038H06+ GATCCTACTACTCCTCAAAGGGAAACAGAGAAGCAAGGTGGAGATGGAGTGAGTGTGGAT
rJMSF050D11+ GATCCTACTACTCCTCAAAGGGAAACAGAGAAGCAAGGTGGAGATGGAGTGAGTGTGGAT
rJMFF040N20+ GATCCTACTACTCCTCAAAGGGAAACAGAGAAGCAAGGTGGAGATGGAGTGAGTGTGGAT
rJMSF002M08+ GATCCTACTACTCCTCAAAGGGAAACAGAGAAGCAAGGTGGAGATGGAGTGAGTGTGGAT
                      ____________________________________________________________
consensus GATCCTACTACTCCTCAAAGGGAAACAGAGAAGCAAGGTGGAGATGGAGTGAGTGTGGAT
 
. : . : . : . : . : . :
rJMSF013J03+ TCAACTGTTTCTATGCCAGCTATAGTTGGGAGGAAACCATTTAACAGATTTGTGTGATTG
rJMSF017P04+ TCAACTGTTTCTATGCCAGCTATAGTTGGGAGGAAACCATTTAACAGATTTGTGTGATTG
rJMSF038H06+ TCAACTGTTTCTANGCCAGCTATAGTTGGGAGGAAACCATTTAACAGATTTGTGTGATTG
rJMSF050D11+ TCAACTGTTTCTATGCCAGCTATAGTTGGGAGGAAACCATTTAACAGATTTGTGTGATTG
rJMFF040N20+ TCAACTGTTTCTATGCCAGCTATAGTTGGGAGGAAACCATTTAACAGATTTGTGTGATTG
rJMSF002M08+ TCAACTGTTTCTATGCCAGCTATAGTTGGGAGGAAACCATTTAACAGATTTGTGTGATTG
                      ____________________________________________________________
consensus TCAACTGTTTCTATGCCAGCTATAGTTGGGAGGAAACCATTTAACAGATTTGTGTGATTG
 
. : . : . : . : . : . :
rJMSF013J03+ GATTTCTT
rJMSF017P04+ GATTTCTT
rJMSF038H06+ GATTTCTT
rJMSF050D11+ GATTTCTTTTTCTTTTTCTTTTTTTGTTAACATCTGTATTAACCATTTTGAGGTTGCTTT
rJMFF040N20+ GATTTCTTTTTCTTTTTCTTTTTTTGTTAACATCTGTATTAACCATTTTGAGGTTGCTTT
rJMSF002M08+ GATTTCTTTTTCTTTTTCTTTTTTTGTTAACATCTGTATTAACCATTTTGAGGTTGCTTT
                      ____________________________________________________________
consensus GATTTCTTTTTCTTTTTCTTTTTTTGTTAACATCTGTATTAACCATTTTGAGGTTGCTTT
 
. : . : . : . : . : . :
rJMSF050D11+ GTGTCTTTTCATGTATACCTACCTACCTACCTGAGTGTGTATTTATTTGGTGATATATGT
rJMFF040N20+ GTGTCTTTTCATGTATACC
rJMSF002M08+ GTGTCTTTTCATGTATACCTACCTACCTACCTGAGTGTGTATTTATTTGGTGATATATGT
                      ____________________________________________________________
consensus GTGTCTTTTCATGTATACCTACCTACCTACCTGAGTGTGTATTTATTTGGTGATATATGT