Contig 001265:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF002J24Sequence294013402 (2)ref|XP_006347839.1|5e-16PREDICTED: mitochondrial import inner membrane translocase subunit TIM44-2-like759001265 (2)ref|XP_009779771.1|4e-90PREDICTED: mitochondrial import inner membrane translocase subunit TIM44-2 [Nic
JMSF029A16Sequence640013402 (2)ref|XP_006347839.1|6e-58PREDICTED: mitochondrial import inner membrane translocase subunit TIM44-2-like735001265 (2)ref|XP_009616194.1|4e-84PREDICTED: mitochondrial import inner membrane translocase subunit TIM44-2 isof

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF029A16+ CNA
                      ____________________________________________________________
consensus CNA
 
. : . : . : . : . : . :
rJMSF029A16+ GATATAAATGAAACTGTGTTTGGGGAATCAAGTGCTGCATTGTCATTAAGGAAATACGTC
rJMSF002J24+ TTAAGGAAATATGCC
                      ____________________________________________________________
consensus GATATAAATGAAACTGTGTTTGGGGAATCAAGTGCTGCATTGTCATTAAGGAAATATGTC
 
. : . : . : . : . : . :
rJMSF029A16+ GCAGAGACCCGACGTTCTCTTTACCAGATTTTGTTTCTGAGGTTCAAGAAGTAATCAGAC
rJMSF002J24+ GCAGAGATCCGACATTCTCTTTACCAGATTTTGTTGTGGAGGTTCAAGAAGTGATCAGAC
                      ____________________________________________________________
consensus GCAGAGATCCGACGTTCTCTTTACCAGATTTTGTTTTTGAGGTTCAAGAAGTGATCAGAC
 
. : . : . : . : . : . :
rJMSF029A16+ CTGTCCTCGAGGCTTTCTATAAAGGAGATATTGAAGTACTTAAAAAATATTGTGCCTCCA
rJMSF002J24+ CAGTCCTTGAGGGTTTCTATAAAGGAGACATCGAAGTACTGAAAAAATATTGTAGCTCCA
                      ____________________________________________________________
consensus CTGTCCTTGAGGGTTTCTATAAAGGAGATATTGAAGTACTTAAAAAATATTGTGGCTCCA
 
. : . : . : . : . : . :
rJMSF029A16+ CGATGGTTGAGCGGTGTAAAGCAGAGCATACGGCTTTCAACNGTCAGGGTTATGTTTTCG
rJMSF002J24+ CGATGATTGAGCGGTGTAAAGCGGAGCATCGTGCTTTCAACAGCCAGGGTTATGTTTTCG
                      ____________________________________________________________
consensus CGATGGTTGAGCGGTGTAAAGCGGAGCATCGTGCTTTCAACAGTCAGGGTTATGTTTTCG
 
. : . : . : . : . : . :
rJMSF029A16+ ATAATAAAATTCTTCATATTTCTGAAGTCGAAGTTCGAGAGACGAAATTGATGGGAGAAA
rJMSF002J24+ ATAATAAAATACTTCATATATCTGAAGTTGAAGTTCGAGAGACAAAATTGATGGGAGAAA
                      ____________________________________________________________
consensus ATAATAAAATTCTTCATATTTCTGAAGTTGAAGTTCGAGAGACGAAATTGATGGGAGAAA
 
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rJMSF029A16+ CTCCCATAATCATTTTAGCGTTCCAAACNCAGCAGGTATATTGTCTACGTGATAAATTGG
rJMSF002J24+ CTCCCATAATCATTTTAGCGTTCCAAACACAGCAGGTCTATNGTCTACGCGATAAACTGG
                      ____________________________________________________________
consensus CTCCCATAATCATTTTAGCGTTCCAAACACAGCAGGTCTATTGTCTACGTGATAAATTGG
 
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rJMSF029A16+ GCTCCATAACAGAAGGGGGAAAAGACTCGATTCNCNCGGTATATTATGCTTGGGCGATGG
rJMSF002J24+ GATCCATAGCCGAAGGGGGGAAGGACGCGATTCACACTGTATACTACGCTTGGGCGATGC
                      ____________________________________________________________
consensus GCTCCATAGCCGAAGGGGGGAAGGACTCGATTCACACTGTATATTATGCTTGGGCGATGG
 
. : . : . : . : . : . :
rJMSF029A16+ AACTAGTGGATGCAGATGAAGCCGGAGAGGGCGCAGTTTTTCCCCTATGGCGGCTTAAGG
rJMSF002J24+ AACTGGTGGATCCAGAAGAGGTTGGAGAGGGCGCAATTTATCCGGTTTGGCGGCTCAGAG
                      ____________________________________________________________
consensus AACTGGTGGATGCAGATGAGGTTGGAGAGGGCGCAGTTTTTCCGGTTTGGCGGCTTAGGG
 
. : . : . : . : . : . :
rJMSF029A16+ AGATGCAACAATTTGGCGTCNCTGCCCTTATATAAC
rJMSF002J24+ AGATGCAACAGTTTGGTGTTGCTGCCCTTATATAACACTTTGTGCCTCACCATTTGAGTG
                      ____________________________________________________________
consensus AGATGCAACAGTTTGGTGTTGCTGCCCTTATATAACACTTTGTGCCTCACCATTTGAGTG
 
. : . : . : . : . : . :
rJMSF002J24+ GAGATAGCTGTTGTATCAGCCTGTTTGCAGTTCATACTCTCCTGGTGGTGGAGAAAATTT
                      ____________________________________________________________
consensus GAGATAGCTGTTGTATCAGCCTGTTTGCAGTTCATACTCTCCTGGTGGTGGAGAAAATTT
 
. : . : . : . : . : . :
rJMSF002J24+ TGGCAGAGAAACTTAATTGTTATAACTTATAAACTGAAAATTCCCATCTTTTTACTGCTG
                      ____________________________________________________________
consensus TGGCAGAGAAACTTAATTGTTATAACTTATAAACTGAAAATTCCCATCTTTTTACTGCTG
 
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rJMSF002J24+ GGTTCATTTGTTGACATGGTCCTCCATGATCACCCTAACATTTTTTCCATTGTACTGTGT
                      ____________________________________________________________
consensus GGTTCATTTGTTGACATGGTCCTCCATGATCACCCTAACATTTTTTCCATTGTACTGTGT
 
. : . : . : . : . : . :
rJMSF002J24+ ATCTCCATCTTCAATTATCTCATAAAATAACCACTACCATCTGTTTCATATGCATTGAGT
                      ____________________________________________________________
consensus ATCTCCATCTTCAATTATCTCATAAAATAACCACTACCATCTGTTTCATATGCATTGAGT