Contig 001264: Sequence
BLAST Hits against nr-aa DB Show
Alignment
This contig is upended
. : . : . : . : . : . :
rJMSF029F17+ TCATAGCCCGAGCCCATCAGCTAG
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consensus TCATAGCCCGAGCCCATCAGCTAG
. : . : . : . : . : . :
rJMSF029F17+ TTATGGAAGGATATAACGGGAGCCATGAACAAAAAGTTGTCNCCATTTTTAGCGCACCAA
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consensus TTATGGAAGGATATAACGGGAGCCATGAACAAAAAGTTGTCNCCATTTTTAGCGCACCAA
. : . : . : . : . : . :
rJMSF029F17+ ACTACTGTTATCGTTGTGGGAACATGGCCTCGATTTTGGAAGTTGATGNCAACAAAGAAC
rJMSF002B12+ GGGAACATGGCCTCGATTTTGGAAGTTGATGCCAACAAAGAAC
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consensus ACTACTGTTATCGTTGTGGGAACATGGCCTCGATTTTGGAAGTTGATGCCAACAAAGAAC
. : . : . : . : . : . :
rJMSF029F17+ ATACNTTTNTTCAGTTTGAGCCTGCTCCAAGAAGGGGNGAACCCGATGTTACCCGGNGAA
rJMSF002B12+ ATACATTTNTTCAGTTTGAGCCTGCTCCAAGAAGGGGNGAACCCGATGTTACCCGGNGAA
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consensus ATACATTTNTTCAGTTTGAGCCTGCTCCAAGAAGGGGNGAACCCGATGTTACCCGGNGAA
. : . : . : . : . : . :
rJMSF029F17+ CTCCCGACTACTTCCTGTAAAGCATNTGACAGTTGNTGATTTGTATTGTCTTACNCTATA
rJMSF007J03+ TTCCTGTAAAGCNTTTGACAGTTGNNGATTTGTANTGTTTTACNCTATA
rJMSF002B12+ CTCCCGACTACTTCCTGTAAAGCATNTGACAGTTGCTGATTTGTATTGTCTTACNCTATA
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consensus CTCCCGACTACTTCCTGTAAAGCATTTGACAGTTGCTGATTTGTATTGTCTTACNCTATA
. : . : . : . : . : . :
rJMSF029F17+ GCTGGNGTTGTGCTACATATTTCCATATGTTGAAGACTCGGTCATCGTCTTGCGAANTAA
rJMSF007J03+ GCNGGGGTTGTGNTACATATTTCCATATGTTGAAGACTCGGTCATNGTCTTGNGAAATAA
rJMSF002B12+ GCNGGNGNTGTGCTACATATTTCCATATGTTGAAGACTCGGTCATCGTCTTGCGAANTAA
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consensus GCTGGGGTTGTGCTACATATTTCCATATGTTGAAGACTCGGTCATCGTCTTGCGAAATAA
. : . : . : . : . : . :
rJMSF029F17+ GCTTTTGGGGGCCAAAGCCCGAGAGGGCNAGAGGCATGTAAAATGGTACAACNTGATGTC
rJMSF007J03+ GCTTTTGGGGGCCAAAGCCCGNGAGGGCNAGAGGCNNGTAAAATGGTACAACNTGATGTC
rJMSF002B12+ GCTTTTGGGGGCCAAAGCCCGAGAGGGCNAGAGGCATGTAAAATGGTACAACNTGATGTC
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consensus GCTTTTGGGGGCCAAAGCCCGAGAGGGCNAGAGGCATGTAAAATGGTACAACNTGATGTC
. : . : . : . : . : . :
rJMSF029F17+ CCCCTCGATTCAAGTTACNTTNTAACCTATCTTTAGGNGTAATAGAAGNGGGGAAATCCN
rJMSF007J03+ CCCCNCGATTCAAGTTACNTTNTAACCTATNTTTAGGNGTAATAGAAGNGGGGAAATCCN
rJMSF002B12+ CCCCNCGATTCAAGTTACNTTNTAACCTATCTTTAGGNGTAATAGAAGNGGGGAAATCCA
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consensus CCCCTCGATTCAAGTTACNTTNTAACCTATCTTTAGGNGTAATAGAAGNGGGGAAATCCA
. : . : . : . : . : . :
rJMSF029F17+ GCAGCTGCAGACTGCAGNGCTACTGNGTATTGNGTCNTTTCANGGATCCTCTTTTTTTTC
rJMSF007J03+ NCNGNTGCNGNCTGCAGNGCTACTGNGTATTGNGTCNTTTTATGGNTCCTCTTTTTTTTC
rJMSF002B12+ GCAGCTGCAGACTGCAGNGCTACTGNGTATTGNGTCATTTCANGGATCCTCTTTTTTTTC
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consensus GCAGCTGCAGACTGCAGNGCTACTGNGTATTGNGTCATTTCATGGATCCTCTTTTTTTTC
. : . : . : . : . : . :
rJMSF029F17+ CC-TTTTTTTTTTTATTTTTGAAAAATATATTTTTCCATTTCTTGTTAATTATTAATTTT
rJMSF007J03+ CCNTTTTTTTTTTTATTTTTGAAAAATATATTTTTCCATTTCTTGTTAATTANTAATTTT
rJMSF002B12+ CC-TTTTTTTTTTTATTTTTGAAAAATATATTTTTCCATTTCTTGTTAATTATTAATTTT
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consensus CC-TTTTTTTTTTTATTTTTGAAAAATATATTTTTCCATTTCTTGTTAATTATTAATTTT
. : . : . : . : . : . :
rJMSF029F17+ CATTTCTTTGTTTCATTGCAAATGGTGGA-CATGTAGTGTATAAGTATGTATAAGGTTAA
rJMSF007J03+ CATTTCTNTGTTTCATTGCAAATGGTGGAGCATGTAGTGTATAAGTATGTATNAGGTTAA
rJMSF002B12+ CATTTCTTTGTTTCATTGCAAATGGTGGA-CATGTAGTGTATAAGTATGTATAAGGTTAA
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consensus CATTTCTTTGTTTCATTGCAAATGGTGGA-CATGTAGTGTATAAGTATGTATAAGGTTAA
. : . : . : . : . : . :
rJMSF029F17+ GAATTCAGTTTATGCTGTTT
rJMSF007J03+ GAATNCAGTTTATGCTGTTTACTGNTACNGCTTNCCCTTGTTAATGTAACTGCAATA
rJMSF002B12+ GAATTCAGTTTATGCTGTTT-CTGTTACTGCTTGCCCTTGTTAATGTAACTGCAATACTT
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consensus GAATTCAGTTTATGCTGTTTACTGTTACTGCTTGCCCTTGTTAATGTAACTGCAATACTT
. : . : . : . : . : . :
rJMSF002B12+ TGGCCTGTTGTTAATGGGGTTCAAGCCTTTCATTTCAAGCTAGTTCTTGGATGATTTCTG
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consensus TGGCCTGTTGTTAATGGGGTTCAAGCCTTTCATTTCAAGCTAGTTCTTGGATGATTTCTG