Contig 001259:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010A09Sequence450001259 (7)gb|EYU24699.1|6e-54hypothetical protein MIMGU_mgv1a017069mg [Erythranthe guttata]501001259 (7)gb|EYU24699.1|1e-53hypothetical protein MIMGU_mgv1a017069mg [Erythranthe guttata]
JMFF021P01Sequence540001259 (7)ref|XP_009611259.1|6e-55PREDICTED: 60S ribosomal protein L37-3 [Nicotiana tomentosiformis] ref|XP_009777506001259 (7)ref|XP_009611259.1|4e-55PREDICTED: 60S ribosomal protein L37-3 [Nicotiana tomentosiformis] ref|XP_009777
JMFN030D20Sequence489001259 (7)gb|EYU24699.1|1e-54hypothetical protein MIMGU_mgv1a017069mg [Erythranthe guttata]
JMSF001C19Sequence249001259 (7)emb|CDO98037.1|4e-43unnamed protein product [Coffea canephora]443001259 (7)ref|XP_009611259.1|2e-55PREDICTED: 60S ribosomal protein L37-3 [Nicotiana tomentosiformis] ref|XP_009777

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF010A09- AGCATTCAAAACAAATTTACTG
JMFN030D20+ AGCATTCAAAACAAATTTACTG
rJMFF021P01- AAAAGAGCATTCAAAACAAATTTACTG
                      ____________________________________________________________
consensus AAAAGAGCATTCAAAACAAATTTACTG
 
. : . : . : . : . : . :
rJMFF010A09- TCACATAAGCAAAATTGAAATACACGCTTAACATAAACACAGCTAAGGATTGAATGGTCA
JMFN030D20+ TCACATAAGCAAAATTGAAATACACGCTTAACATAAACACAGCTAAGGATTGAATGGTCA
JMFF010A09+ AACATAAACACAGCTAAGGATTGAATGGTCA
rJMFF021P01- TCACATAAGCAAAATTGAAATACACGCTTAACATAAACACAGCTAAGGATTGAATGGTCA
rJMSF001C19- CACAGCTAAGGATTGAATGGTCA
                      ____________________________________________________________
consensus TCACATAAGCAAAATTGAAATACACGCTTAACATAAACACAGCTAAGGATTGAATGGTCA
 
. : . : . : . : . : . :
rJMFF010A09- CACAATAAGGTGCCTCAATATCTCACTTGTTCTAATTCTTTGAAGTATCAAAATGAAAAC
JMFN030D20+ CACAATAAGGTGCCTCAATATCTCACTTGTTCTAATTCTTTGAAGTATCAAAATGAAAAC
JMFF010A09+ CACAATAAGGTGCCTCAATATCTCACTTGTTCTAATTCTTTGAAGTATCAAAATGAAAAC
rJMFF021P01- CACAATAAGGTGCCTCAATATCTCACTTGTTCTAATTCTTTGAAGTATCAAAATGAAAAC
rJMSF001C19- CACAATAAGGTGCCTCAATATCTCACTTGTTCTAATTCTTTGAAGTATCAAAATGAAAAC
                      ____________________________________________________________
consensus CACAATAAGGTGCCTCAATATCTCACTTGTTCTAATTCTTTGAAGTATCAAAATGAAAAC
 
. : . : . : . : . : . :
rJMFF010A09- TTAAAAGTAACCTTCATAGATTCACCCTCAATGAACTTCAAGCAGAAGCTGCTGCTGCCT
JMFN030D20+ TTAAAAGTAACCTTCATAGATTCACCCTCAATGAACTTCAAGCAGAAGCTGCTGCTGCCT
JMFF010A09+ TTAAAAGTAACCTTCATAGATTCACCCTCAATGAACTTCAAGCAGAAGCTGCTGCTGCCT
rJMFF021P01- TTAAAAGTAACCTTCATAGATTCACCCTCAATGAACTTCAAGCAGAAGCTGCTGCTGCCT
JMFF021P01+ CTTCAAGCAGAAGCTGCTGCTGCCT
rJMSF001C19- TTAAAAGTAACCTTCATAGATTCACCCTCAATGAACTTCAAGCAGAAGCTGCTGCTGCCT
                      ____________________________________________________________
consensus TTAAAAGTAACCTTCATAGATTCACCCTCAATGAACTTCAAGCAGAAGCTGCTGCTGCCT
 
. : . : . : . : . : . :
rJMFF010A09- TCTTCCTTGGAGCTGCTTCAGTACCTTCCCTGAAGTTGGTCTTGAATCGGCGAGGCACGT
JMFN030D20+ TCTTCCTTGGAGCTGCTTCAGTACCTTCCCTGAAGTTGGTCTTGAATCGGCGAGGCACGT
JMFF010A09+ TCTTCCTTGGAGCTGCTTCAGTACCTTCCCTGAAGTTGGTCTTGAATCGGCGAGGCACGT
rJMFF021P01- TCTTCCTTGGAGCTGCTTCAGTACCTTCCCTGAAGTTGGTCTTGAATCGGCGAGGCACGT
JMFF021P01+ TCTTCCTTGGAGCTGCTTCAGTACCTTCCCTGAAGTTGGTCTTGAATCGGCGAGGCACGT
JMSF001C19+ GAGGCACGT
rJMSF001C19- TCTTCCTTGGAGCTGCTTCAGTACCTTCCCTGAAGTTGGTCTTGAATCGGCGAGGCACGT
                      ____________________________________________________________
consensus TCTTCCTTGGAGCTGCTTCAGTACCTTCCCTGAAGTTGGTCTTGAATCGGCGAGGCACGT
 
. : . : . : . : . : . :
rJMFF010A09- TGCGGAGATACCTCATGCGGCCAGTTCCAGTCGTCTTTCTACGGATCGCCTTCACGCTCC
JMFN030D20+ TGCGGAGATACCTCATGCGGCCAGTTCCAGTCGTCTTTTTACGGATCGCCTTCACGCTCC
JMFF010A09+ TGCGGAGATACCTCATGCGGCCAGTTCCAGTCGTCTTTCTACGGATCGCCTTCACGCTCC
rJMFF021P01- TGCGGAGATACCTCATGCGGCCAGTTCCAGTCGTCTTTCTACGGATCGCCTTCACGCTCC
JMFF021P01+ TGCGGAGATACCTCATGCGGCCAGTTCCAGTCGTCTTTCTACGGATCGCCTTCACGCTCC
JMSF001C19+ TGCGGAGATACCTCATGCGGCCAGTTCCAGTCGTCTTTCTACGGATCGCCTTCACGCTCC
rJMSF001C19- TGCGGAGATACCTCATGCGGCCAGTTCCAGTCGTCTTTCTACGGATCGCCTTCACGCTCC
                      ____________________________________________________________
consensus TGCGGAGATACCTCATGCGGCCAGTTCCAGTCGTCTTTCTACGGATCGCCTTCACGCTCC
 
. : . : . : . : . : . :
rJMFF010A09- AGTTATATGTCCTCTTGCGGGCGGCTGGGTAAGCAAAAGCCGAGCAGCGGCTCTTCTGGA
JMFN030D20+ AGTTATATGTCCTCTTGCGGGCGGCTGGGTAAGCACAAGCCGAGCAGCGGCTCTTCTGGA
JMFF010A09+ AGTTATATGTCCTCTTGCGGGCGGCTGGGTAAGCAAAAGCCGAGCAGCGGCTCTTCTGGA
rJMFF021P01- AGTTATATGTCCTCTTGCGGGCGGCTGGGTAAGCACAAGCCGAGCAGCGGCTCTTCTGGA
JMFF021P01+ AGTTATATGTCCTCTTGCGGGCGGCTGGGTAAGCACAAGCCGAGCAGCGGCTCTTCTGGA
JMSF001C19+ AGTTATATGTCCTCTTGCGGGCGGCTGGGTAAGCACAAGCCGAGCAGCGGCTCTTCTGGA
rJMSF001C19- AGTTATATGTCCTCTTGCGGGCGGCTGGGTAAGCACAAGCCGAGCAGCGGCTCTTCTGGA
                      ____________________________________________________________
consensus AGTTATATGTCCTCTTGCGGGCGGCTGGGTAAGCACAAGCCGAGCAGCGGCTCTTCTGGA
 
. : . : . : . : . : . :
rJMFF010A09- GATGGAAGCTGCGACGGCCACACCTCACACAGAGAGTGTGGGTCTTGTTTCTCCTCTTTC
JMFN030D20+ GATGGAAGCTGCGACGGCCACACCTCACACAGAGAGTGTGGGTCTTGTTTCTCCTCTTTC
JMFF010A09+ GATGGAAGCTGCGACGGCCACACCTCACACAGAGAGTGTGGGTCTTGTTTCTCCTCTTTC
rJMFF021P01- GATGGAAGCTGCGACGGCCACACCTCACACAGAGAGTGTGGGTCTTGTTTCTCCTCTTTC
JMFF021P01+ GATGGAAGCTGCGACGGCCACACCTCACACAGAGAGTGTGGGTCTTGTTTCTCCTCTTTC
JMSF001C19+ GATGGAAGCTGCGACGGCCACACCTCACACAGAGAGTGTGGGTCTTGTTTCTCCTCTTTC
rJMSF001C19- GATGGAAGCTGCGACGGCCACACCTCACACAGAGAGTGTGGGTCTTGTTTCTCCTCTTTC
                      ____________________________________________________________
consensus GATGGAAGCTGCGACGGCCACACCTCACACAGAGAGTGTGGGTCTTGTTTCTCCTCTTTC
 
. : . : . : . : . : . :
rJMFF010A09- CAAAGCTCCCCGTTCCCTTCCCCATTGCTGAACAGTTGCAGAAACCCTAATCTCAAACT
JMFN030D20+ CAAAGCTCCCCGTTCCCTTCCCCATTGCTGAACAGTTGCAGAAAC
JMFF010A09+ CAAAGCTCCCCGTTCCCTTCCCCATTGCTGAACAGTTGCAGAAACCCTAATCTCAAACT
rJMFF021P01- CAAAGCTCCCCGTTCCCTTCCCCATTGCTGAACAGTTGCAGAAACCCTAATCTCAAACT
JMFF021P01+ CAAAGCTCCCCGTTCCCTTCCCCATTGCTGAACAGTTGCAGAAACCCTAATCTCAAACT
JMSF001C19+ CAAAGCTCCCCGTTCCCTTCCCCATTGCTGAACAGTTGCAGAAACCCTAATCTCAAACT
rJMSF001C19- CAAAGCTCCCCGTTCCCTTCCCCATTGCTGAACAGTTGCAGAAACCCTAATCTCAAACTC
                      ____________________________________________________________
consensus CAAAGCTCCCCGTTCCCTTCCCCATTGCTGAACAGTTGCAGAAACCCTAATCTCAAACTC