Contig 001235:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF016K03Sequence564001794 (9)gb|AAR00230.1|6e-104flavonoid 3'-hydroxylase [Ipomoea purpurea]720001235 (6)gb|ABW69693.1|5e-72flavonoid 3'-hydrogenase [Ipomoea purpurea]
JMFF046B08Sequence524001794 (9)gb|AAR00230.1|5e-95flavonoid 3'-hydroxylase [Ipomoea purpurea]416001235 (6)gb|ACL26686.1|1e-16flavonoid 3'-hydroxylase [Ipomoea ternifolia]
JMFF049G13Sequence497001794 (9)gb|AAR00230.1|2e-83flavonoid 3'-hydroxylase [Ipomoea purpurea]454001235 (6)gb|ACL26686.1|8e-19flavonoid 3'-hydroxylase [Ipomoea ternifolia]
JMFN006P07Sequence627001235 (6)dbj|BAD00187.1|1e-114flavonoid 3'-hydroxylase [Ipomoea nil] dbj|BAD00190.1| flavonoid 3'-hydroxylase
JMSF014G15Sequence502001794 (9)gb|AAR00230.1|3e-91flavonoid 3'-hydroxylase [Ipomoea purpurea]806001235 (6)gb|ABW69693.1|7e-96flavonoid 3'-hydrogenase [Ipomoea purpurea]
JMSF033N10Sequence597001794 (9)gb|AAR00230.1|3e-115flavonoid 3'-hydroxylase [Ipomoea purpurea]719001235 (6)dbj|BAD00187.1|4e-116flavonoid 3'-hydroxylase [Ipomoea nil] dbj|BAD00190.1| flavonoid 3'-hydroxylase

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF014G15+ CAATCG
                      ____________________________________________________________
consensus CAATCG
 
. : . : . : . : . : . :
rJMSF014G15+ CAGAACTACTACGCAACCCCAAAAATCTTAAACCCAGCACAACAAGAGCTTGACTTAGTG
                      ____________________________________________________________
consensus CAGAACTACTACGCAACCCCAAAAATCTTAAACCCAGCACAACAAGAGCTTGACTTAGTG
 
. : . : . : . : . : . :
JMFN006P07- TGACTTAACCGATCTACCTTTCCTGCAAGCA
rJMSF033N10+ GCTAGTCACAGAATCTGACTTAACCGATCTACCTTTCCTGCAAGCA
rJMSF014G15+ GTGGGTCAAAATCAGCTAGTCACAGAATCTGACTTAACCGATCTACCTTTCCTGCAAGCA
                      ____________________________________________________________
consensus GTGGGTCAAAATCAGCTAGTCACAGAATCTGACTTAACCGATCTACCTTTCCTGCAAGCA
 
. : . : . : . : . : . :
JMFN006P07- ATAGTGAAGGAGACCTTCAGGCTACACCCAT-CCACCCCACTCTCTCTTCCAAGAATGGG
rJMSF033N10+ ATAGTGAAGGAGACCTTCAGGCTACACCCAT-CCACCCCACTCTCTCTTCCAAGAATGGG
rJMSF014G15+ ATAGTGAAGGAGACCTTCAGGCTACACCCATCCCACCCCACTCTCTCTTCCAAGAATGGG
rJMFF016K03+ TCTTCCAAGAATGGG
                      ____________________________________________________________
consensus ATAGTGAAGGAGACCTTCAGGCTACACCCAT-CCACCCCACTCTCTCTTCCAAGAATGGG
 
. : . : . : . : . : . :
JMFN006P07- AGCTCAGGGTTGCGAGATCAATGGCTACTTCATCCCCAAAGGCGCAACGCTTTTGGTCAA
rJMSF033N10+ AGCTCAGGGTTGCGAGATCAATGGCTACTTCATCCCCAAAGGCGCAACGCTTTTGGTCAA
rJMSF014G15+ AGCTCAGGGTTGCGAGATCAATGGCTACTTCATCCCCAAAGGCGCAACGCTTTTGGTCAA
rJMFF016K03+ AGCTCAGGGTTGCGAGATCAATGGCTACTTCATCCCCAAAGGCGCAACGCTTTTGGTCAA
                      ____________________________________________________________
consensus AGCTCAGGGTTGCGAGATCAATGGCTACTTCATCCCCAAAGGCGCAACGCTTTTGGTCAA
 
. : . : . : . : . : . :
JMFN006P07- CGTTTGGGCCATAGCTCGTGATCCCAATGTGTGGACAAATCCTCTTGAGTTCAACCCACA
rJMSF033N10+ CGTTTGGGCCATAGCTCGTGATCCCAATGTGTGTACAAATCCTCTTGAGTTCAACCCACA
rJMSF014G15+ CGTTTGGGCCATAGCTCGTGATCCCAATGTGTGTACAAATCCTCTTGAGTTCAACCCACA
rJMFF016K03+ CGTTTGGGCCATAGCTCGTGATCCCAATGTGTGGACAAATCCTCTTGAGTTCAACCCACA
                      ____________________________________________________________
consensus CGTTTGGGCCATAGCTCGTGATCCCAATGTGTGGACAAATCCTCTTGAGTTCAACCCACA
 
. : . : . : . : . : . :
JMFN006P07- CCGATTCTTGCCTGGTGGAGAAAAGCCCAACGTGGATATTAAAGGGAATGACTTTGAAGT
rJMSF033N10+ CCGATTCTTGCCTGGTGGAGAAAAGCCCAACGTGGATATTAAAGGGAATGACTTTGAAGT
rJMSF014G15+ CCGATTCTTGCCTGGTGGAGAAAAGCCCAACGTGGATATTAAAGGGAATGACTTTGAAGT
rJMFF016K03+ CCGATTCTTGCCTGGTGGAGAAAAGCCCAACGTGGATATTAGAGGGAATGACTTTGAAGT
                      ____________________________________________________________
consensus CCGATTCTTGCCTGGTGGAGAAAAGCCCAACGTGGATATTAAAGGGAATGACTTTGAAGT
 
. : . : . : . : . : . :
JMFN006P07- GATTCCTTTTGGAGCCGGGCGTAGAATATGCTCTGGGATGAGTTTGGGGATAAGGATGGT
rJMSF033N10+ GATTCCTTTTGGAGCCGGGCGTAGAATATGCTCTGGGATGAGTTTGGGGATAAGGATGGT
rJMSF014G15+ GATTCCTTTTGGAGCCGGGCGTAGAATATGCTCTGGGATGAGTTTGGGGATAAGGATGGT
rJMFF016K03+ GATTCCTTTTGGAGCCGGGCGTAGAATATGCTCTCGGATGAGTTTGGGGATAAGGATGGT
                      ____________________________________________________________
consensus GATTCCTTTTGGAGCCGGGCGTAGAATATGCTCTGGGATGAGTTTGGGGATAAGGATGGT
 
. : . : . : . : . : . :
JMFN006P07- TCACCTGTTGGTTGCAACTTTGGTGCATGCTTTTGATTGGGATTTGGTGAATGGACAATC
rJMSF033N10+ TCACCTGTTGGTTGCAACTTTGGTGCATGCTTTTGATTGGGATTTGGTGAATGGACAATC
rJMSF014G15+ TCACCTGTTGGTTGCAACTTTGGTGCATGCTTTTGATTGGGATTTGGTGAATGGACAATC
rJMFF016K03+ TCACCTGTTGGTTGCAACTTTGGTGCATGCTTTTGATT-GGATTTGGTGAATGGACAATC
rJMFF046B08+ GAATGGACAATC
rJMFF049G13+ GGATTTGGTGAATGGACAATC
                      ____________________________________________________________
consensus TCACCTGTTGGTTGCAACTTTGGTGCATGCTTTTGATTGGGATTTGGTGAATGGACAATC
 
. : . : . : . : . : . :
JMFN006P07- TGTAGAGACGCTCAATATGGAGGAAGCTTATGGTCTCACCCTTCAACGAGCTGTTCCTTT
rJMSF033N10+ TGTAGAGACGCTCAATATGGAGGAAGCTTATGGTCTCACCCTTCAACGAGCTGTTCCTTT
rJMSF014G15+ TGTAGAGACGCTCAATATGGAGGAAGCTTATGGTCTCACCCTTCAACGAGCTGTTCCTTT
rJMFF016K03+ TGTAGAGACGCTCAATATGGAGGAAGCTTATGGTCTCACCCTTCAACGAGCTGTTCCTTT
rJMFF046B08+ TGTAGAGACGCTCAATATGGAGGAAGCTTATGGTCTCACCCTTCAACGAGCTGTTCCTTT
rJMFF049G13+ TGTAGAGACGCTCAATATGGAGGAAGCTTATGGTCTCACCCTTCAACGAGCTGTTCCTTT
                      ____________________________________________________________
consensus TGTAGAGACGCTCAATATGGAGGAAGCTTATGGTCTCACCCTTCAACGAGCTGTTCCTTT
 
. : . : . : . : . : . :
JMFN006P07- GATGTTGCATCCAAAGCCCAGATTACAACCACATCTCTATACTCTCAATTAAATTGCAAT
rJMSF033N10+ GATGTTGCATCCAAAGCCCAGATTACAACCACATCTCTATACTCTCAATTAAATTGCAAT
rJMSF014G15+ GATGTTGCATCCAAAGCCCAGATTACAACCACATCTCTATACTCTCAATTAAATTGCAAT
rJMFF016K03+ GATGTTGCATCCAAAGCCCAGATTACAACCACATCTCTATACTCTCAATTAAATTGCAAT
rJMFF046B08+ GATGTTGCATCCAAAGCCCAGATTACAACCACATCTCTATACTCTCAATTAAATTGCAAT
rJMFF049G13+ GATGTTGCATCCAAAGCCCAGATTACAACCACATCTCTATACTCTCAATTAAATTGCAAT
                      ____________________________________________________________
consensus GATGTTGCATCCAAAGCCCAGATTACAACCACATCTCTATACTCTCAATTAAATTGCAAT
 
. : . : . : . : . : . :
JMFN006P07- TTGATTTTGGTAATTATACAATTATAATCGAGGGACATAGGATCCCCATTTATTTATATT
rJMSF033N10+ TTGATTTTGGTGATTATACAATTATAATCGAGGGACATAGGATCCCCATTTATTTATATT
rJMSF014G15+ TTGATTTTGGTGATTATACAATTATAATCGAGGGACATAGGATCCCCATTTATTTATATT
rJMFF016K03+ TTGATTTTGGTGATTATACAATTATAATCGAGGGACATAGGATCCCCATTTATTTATATT
rJMFF046B08+ TTGATTTTGGTGATTATACAATTATAATCGAGGGACATAGGATCCCCATTTATTTATATT
rJMFF049G13+ TTGATTTTGGTGATTATACAATTATAATCGAGGGACATAGGATCCCCATTTATTTATATT
                      ____________________________________________________________
consensus TTGATTTTGGTGATTATACAATTATAATCGAGGGACATAGGATCCCCATTTATTTATATT
 
. : . : . : . : . : . :
JMFN006P07- CAGTTATAAGAGACTTCCAACAAAGGTCTAGCTTTCGACCTTAAAAGTTGTAAAAGA
rJMSF033N10+ CAGTTATAAGAGACTTCCAACAAAGGTCTAGCTTTCGACCTTAAAAGTTGTAAAAGAGGT
rJMSF014G15+ CAGTTATAAGAGACTTCCAACAAAGGTCTAGCTTTCGACCTTAAAAGTTGTAAAAGAGGT
rJMFF016K03+ CAGTTATAAGAGACTTCCAACAAAGGTCTAGCTTTCGACCTTAAAAGTTGTAAAAGAGGT
rJMFF046B08+ CAGTTATAAGAGACTTCCAACAAAGGTCTAGCTTTCGACCTTAAAAGTTGTAAAAGAGGT
rJMFF049G13+ CAGTTATAAGAGACTTCCAACAAAGGTCTAGCTTTCGACCTTAAAAGTTGTAAAAGAGGT
                      ____________________________________________________________
consensus CAGTTATAAGAGACTTCCAACAAAGGTCTAGCTTTCGACCTTAAAAGTTGTAAAAGAGGT
 
. : . : . : . : . : . :
rJMSF033N10+ CCTACATATGTAAAAGCCCGCCAAAGGAAAACTGGTTGTATTCAATTCCGCTAGGCCTTG
rJMSF014G15+ CCTACATATGTAAAAGCCCGCCAAAGGAAAACTGGTTGTATTCAATTCCGCTAGGCCTTG
rJMFF016K03+ CCTACATATGTAAAAGCCCGCCAAAGGAAAACTGGTTGTATTCAATTCCGCTAGGCCTTG
rJMFF046B08+ CCTACATATGTAAAAGCCCGCCAAAGGAAAACTGGTTGTATTCAATTCCGCTAGGCCTTG
rJMFF049G13+ CCTACATATGTAAAAGCCCGCCAAAGGAAAACTGGTTGTATTCAATTCCGCTAGGCCTTG
                      ____________________________________________________________
consensus CCTACATATGTAAAAGCCCGCCAAAGGAAAACTGGTTGTATTCAATTCCGCTAGGCCTTG
 
. : . : . : . : . : . :
rJMSF033N10+ TCCGAAAGACCTCA
rJMSF014G15+ TCCGAAAGACCTCATGAAGA
rJMFF016K03+ TCCGAAAGACCTCATGAAGACTACAAAGGTCATATATAATGGTAAACCCAGTGTATTTGT
rJMFF046B08+ TCCGAAAGACCTCATGAAGACTACAAAGGTCATATATAATGGTAAACCCAGTGTATTTGT
rJMFF049G13+ TCCGAAAGACCTCATGAAGACTACAAAGGTCATATATAATGGTAAACCCAGTGTATTTGT
                      ____________________________________________________________
consensus TCCGAAAGACCTCATGAAGACTACAAAGGTCATATATAATGGTAAACCCAGTGTATTTGT
 
. : . : . : . : . : . :
rJMFF016K03+ TGTAA
rJMFF046B08+ TGTAA
rJMFF049G13+ TGTAAGGTCTTCTGGTAGATGTTCTTAGTCATATTAAAAGTTCCAAACATCTTTAGTAGG
                      ____________________________________________________________
consensus TGTAAGGTCTTCTGGTAGATGTTCTTAGTCATATTAAAAGTTCCAAACATCTTTAGTAGG