Contig 001218:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF016K12Sequence592000079 (5)749001218 (5)emb|CBI19906.3|2e-108unnamed protein product [Vitis vinifera]
JMFF031C01Sequence567000079 (5)684001218 (5)emb|CBI19906.3|3e-94unnamed protein product [Vitis vinifera]
JMFF047A04Sequence463000079 (5)378001218 (5)emb|CBI19906.3|2e-28unnamed protein product [Vitis vinifera]
JMFN005C21Sequence615001218 (5)emb|CDP07369.1|3e-110unnamed protein product [Coffea canephora]
JMSF041I06Sequence731000079 (5)dbj|BAJ53102.1|2e-07JHL20J20.9 [Jatropha curcas] gb|KDP36892.1| hypothetical protein JCGZ_08183 [Jat614001218 (5)emb|CBI19906.3|7e-80unnamed protein product [Vitis vinifera]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN005C21- AGACATAGAACCAAGGCGTATCAGGCTGAAGTCAAGTAGTTATACCA
                      ____________________________________________________________
consensus AGACATAGAACCAAGGCGTATCAGGCTGAAGTCAAGTAGTTATACCA
 
. : . : . : . : . : . :
JMFN005C21- CCAACACCCTCTTAGACACTGTTACAGCTGCTACTATACAGTTTAAGGAGATGGGTGGAA
rJMFF016K12+ TTAGACACTGTTACAGCTGCTACTATACAGTTTAAGGAGATGGGTGGAA
                      ____________________________________________________________
consensus CCAACACCCTCTTAGACACTGTTACAGCTGCTACTATACAGTTTAAGGAGATGGGTGGAA
 
. : . : . : . : . : . :
JMFN005C21- GAAGTAGGCCAGCTGAATCTCATAAGATGGCTGAACAGCCAGCTGAAAAGAAAAAAGCTT
rJMFF016K12+ GAAGTAGGCCAGCTGAATCTCATAAGATGGCTGAACAGCCAGCTGAAAAGAAAAAAGCTT
rJMFF031C01+ TCATAAGATGGCTGAACAGCCAGCTGAAAAGAAAAAAGCTT
                      ____________________________________________________________
consensus GAAGTAGGCCAGCTGAATCTCATAAGATGGCTGAACAGCCAGCTGAAAAGAAAAAAGCTT
 
. : . : . : . : . : . :
JMFN005C21- TTGCCGATTGGCTTACTGCAATGAAGCCTGTCAATGAGGAGAAAGATCATTGGGTTCCTG
rJMSF041I06+ AAAGATCATTGGGTTCCTG
rJMFF016K12+ TTGCCGATTGGCTTACTGCAATGAAGCCTGTCAATTAGGAGAAAGATCATTGGGTTCCTG
rJMFF031C01+ TTGCCGATTGGCTTACTGCAATGAAGCCTGTCAATGAGGAGAAAGATCATTGGGTTCCTG
                      ____________________________________________________________
consensus TTGCCGATTGGCTTACTGCAATGAAGCCTGTCAATGAGGAGAAAGATCATTGGGTTCCTG
 
. : . : . : . : . : . :
JMFN005C21- ATGAAGCAGTAACCAAGTGCACAGGTTGTGGGGCAGACTTTAGTGCTTTCAATCGAAAGC
rJMSF041I06+ ATGAAGCAGTAACCAAGTGCACAGGTTGTGGGGCAGACTTTAGTGCTTTCAATCGAAAGC
rJMFF016K12+ ATGAAGCAGTAACCAAGTGCACAGGTTGTGGGGCAGACTTTAGTGCTTTCAATCGAAAGC
rJMFF031C01+ ATGAAGCAGTAACCAAGTGCACAGGTTGTGGGGCAGACTTTAGTGCTTTCAATCGAAAGC
                      ____________________________________________________________
consensus ATGAAGCAGTAACCAAGTGCACAGGTTGTGGGGCAGACTTTAGTGCTTTCAATCGAAAGC
 
. : . : . : . : . : . :
JMFN005C21- ATCACTGCCGTAATTGTGGAGATATTTTCTGTGACAAGTGCACTCAAGGAAGAGTTGCAT
rJMSF041I06+ ATCACTGCCGTAATTGTGGAGATATTTTCTGTGACAAGTGCACTCAAGGAAGAGTTGCAT
rJMFF016K12+ ATCACTGCCGTAATTGTGGAGATATTTTCTGTGACAAGTGCACTCAAGGAAGAGTTGCAT
rJMFF031C01+ ATCACTGCCGTAATTGTGGAGATATTTTCTGTGACAAGTGCACTCAAGGAAGAGTTGCAT
                      ____________________________________________________________
consensus ATCACTGCCGTAATTGTGGAGATATTTTCTGTGACAAGTGCACTCAAGGAAGAGTTGCAT
 
. : . : . : . : . : . :
JMFN005C21- TGACAGCTGATGAAAATGCACCAGTTGTCCGAGTTTGCGAGCGATGCAAGAATGAGGTGT
rJMSF041I06+ TGACAGCTGATGAAAATGCACCAGTTGTCCGAGTTTGCGAGCGATGCAAGAATGAGGTGT
rJMFF016K12+ TGACAGCTGATGAAAATGCACCAGTTGTCCGAGTTTGCGAGCGATGCAAGAATGAGGTGT
rJMFF031C01+ TGACAGCTGATGAAAATGCACCAGTTGTCCGAGTTTGCGAGCGATGCAAGAATGAGGTGT
                      ____________________________________________________________
consensus TGACAGCTGATGAAAATGCACCAGTTGTCCGAGTTTGCGAGCGATGCAAGAATGAGGTGT
 
. : . : . : . : . : . :
JMFN005C21- CTCGCAGGTTAAGCAATGCTAAGGAAGCTGCAAGTAGACCTGTGCTGCAGAGTCATGAAG
rJMSF041I06+ CTCGCAGGTTAAGCAATGCTAAGGAAGCTGCAAGTAGACCTGTGCTGCAGAGTCATGAAG
rJMFF016K12+ CTCGCAGGTTAAGCAATGCTAAGGAAGCTGCAAGTAGACCTGTGCTGCAGAGTCATGAAG
rJMFF031C01+ CTCGCAGGTTAAGCAATGCTAAGGAAGCTGCAAGTAGACCTGTGCTGCAGAGTCATGAAG
rJMFF047A04+ TGCTGCAGAGTCATGAAG
                      ____________________________________________________________
consensus CTCGCAGGTTAAGCAATGCTAAGGAAGCTGCAAGTAGACCTGTGCTGCAGAGTCATGAAG
 
. : . : . : . : . : . :
JMFN005C21- ACCTAGCTAAGAAGCTTCAGGAGGAGATGGAGAGAAACAGCAAGGCATCATCTGGCTCCA
rJMSF041I06+ ACCTAGCTAAGAAGCTTCAGGAGGAGATGGAGAGAAACAGCAAGGCATCATCTGGCTCCA
rJMFF016K12+ ACCTAGCTAAGAAGCTTCAGGAGGAGATGGAGAGAAACAGCAAGGCATCATCTGGCTCCA
rJMFF031C01+ ACCTAGCTAAGAAGCTTCAGGAGGAGATGGAGAGAAACAGCAAGGCATCATCTGGCTCCA
rJMFF047A04+ ACCTAGCTAAGAAGCTTCAGGAGGAGATGGAGAGAAACAGCAAGGCATCATCTGGCTCCA
                      ____________________________________________________________
consensus ACCTAGCTAAGAAGCTTCAGGAGGAGATGGAGAGAAACAGCAAGGCATCATCTGGCTCCA
 
. : . : . : . : . : . :
JMFN005C21- GGTCAGATGGTTTTGGAAGGCGGATGAAAGAGGTGGCCTGCCCTACTTGTACAGTTCATT
rJMSF041I06+ GGTCAGATGGTTTTGGAAGGCGGATGAAAGAGGTGGCCTGCCCTACTTGTACAGTTCATT
rJMFF016K12+ GGTCAGATGGTTTTGGAAGGCGGATGAAAGAGGTGGCCTGCCCTACTTGTACAGTTCATT
rJMFF031C01+ GGTCAGATGGTTTTGGAAGGCGGATGAAAGAGGTGGCCTGCCCTACTTGTACAGTTCATT
rJMFF047A04+ GGTCAGATGGTTTTGGAAGGCGGATGAAAGAGGTGGCCTGCCCTACTTGTACAGTTCATT
                      ____________________________________________________________
consensus GGTCAGATGGTTTTGGAAGGCGGATGAAAGAGGTGGCCTGCCCTACTTGTACAGTTCATT
 
. : . : . : . : . : . :
JMFN005C21- TGCAGGTTCAAGTCCCAAGCTCCGGTTC
rJMSF041I06+ TGCAGGTTCAAGTCCCAAGCTCCGGTTCAGAGACAATAGAATGCGGGGTTTGCCAACATC
rJMFF016K12+ TGCAGGTTCAAGTCCCAAGCTCCGGTTCAGAGACAATAGAATGCGGGGTTTGCCAACATC
rJMFF031C01+ TGCAGGTTCAAGTCCCAAGCTCCGGTTCAGAGACAATAGAATGCGGGGTTTGCCAACATC
rJMFF047A04+ TGCAGGTTCAAGTCCCAAGCTCCGGTTCAGAGACAATAGAATGCGGGGTTTGCCAACATC
                      ____________________________________________________________
consensus TGCAGGTTCAAGTCCCAAGCTCCGGTTCAGAGACAATAGAATGCGGGGTTTGCCAACATC
 
. : . : . : . : . : . :
rJMSF041I06+ CATTCATCGTCAGTGCTCACTGATTTCATACTCTTCAGCGTCGTTGTTCAAACTAGCTTG
rJMFF016K12+ CATTCATCGTCAGTGCTCACTGATTTCATACTCTTCAGCGTCGTTGTTCAAACTAGCTTG
rJMFF031C01+ CATTCATCGTCAGTGCTCACTGATTTCATACTCTTCAGCGTCGTTGTTCAAACTAGCTTG
rJMFF047A04+ CATTCATCGTCAGTGCTCACTGATTTCATACTCTTCAGCGTCGTTGTTCAAACTAGCTTG
                      ____________________________________________________________
consensus CATTCATCGTCAGTGCTCACTGATTTCATACTCTTCAGCGTCGTTGTTCAAACTAGCTTG
 
. : . : . : . : . : . :
rJMSF041I06+ TGTGATTGTGTTCTCTGTATCGGTGTTGATTTCTGTTCCTATCCTAGTTCTGTTGTATTT
rJMFF016K12+ TGTGATTGTGTTCTCTGTATCGGTGTTGATTTCTGTTCCTATCCTAGTTCTGTTGTATTT
rJMFF031C01+ TGTGATTGTGTTCTCTGTATCGGTGTTGATTTCTGTTCCTATCCTAGTTCTGTTGTATTT
rJMFF047A04+ TGTGATTGTGTTCTCTGTATCGGTGTTGATTTCTGTTCCTATCCTAGTTCTGTTGTATTT
                      ____________________________________________________________
consensus TGTGATTGTGTTCTCTGTATCGGTGTTGATTTCTGTTCCTATCCTAGTTCTGTTGTATTT
 
. : . : . : . : . : . :
rJMSF041I06+ GCTGTT
rJMFF016K12+ GCTGTTTCACAGTTCCCATGAGTTGGTTTATCA
rJMFF031C01+ GCTGTTTCACAGTTCCCATGAGTTGGTTTATCA
rJMFF047A04+ GCTGTTTCACAGTTCCCATGAGTTGGTTTATCATACTCAACATTCATACTTGAAAAAAAG
                      ____________________________________________________________
consensus GCTGTTTCACAGTTCCCATGAGTTGGTTTATCATACTCAACATTCATACTTGAAAAAAAG