Contig 001208:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011B04Sequence538004650 (4)ref|XP_009782512.1|6e-54PREDICTED: uncharacterized protein At1g51745 [Nicotiana sylvestris] ref|XP_00978757001208 (4)ref|XP_009614718.1|6e-41PREDICTED: uncharacterized protein At1g51745-like isoform X2 [Nicotiana tomento
JMFF028M06Sequence264004650 (4)ref|XP_009782512.1|2e-16PREDICTED: uncharacterized protein At1g51745 [Nicotiana sylvestris] ref|XP_00978715001208 (4)ref|XP_009614718.1|2e-32PREDICTED: uncharacterized protein At1g51745-like isoform X2 [Nicotiana tomento
JMFF040L12Sequence586004650 (4)ref|XP_009782512.1|2e-54PREDICTED: uncharacterized protein At1g51745 [Nicotiana sylvestris] ref|XP_00978788001208 (4)ref|XP_009614718.1|4e-42PREDICTED: uncharacterized protein At1g51745-like isoform X2 [Nicotiana tomento
JMFF045L23Sequence623004650 (4)ref|XP_009782512.1|8e-58PREDICTED: uncharacterized protein At1g51745 [Nicotiana sylvestris] ref|XP_00978421001208 (4)

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF040L12+ TACCGCACACGCCATATCCCNTTACA
                      ____________________________________________________________
consensus TACCGCACACGCCATATCCCNTTACA
 
. : . : . : . : . : . :
rJMFF011B04+ ATTAATGAGCAAATTAAACGGCCAGCCTATCACGGGTCACCGGCTTGCTGTTGAAG
rJMFF028M06+ GGCTTGCTGTTGAAG
rJMFF040L12+ TTTCATTAATGAGCAAATTAAACGGCCAGCNTATCACGGGTCACCGGCTTGCTGTTGAAG
                      ____________________________________________________________
consensus TTTCATTAATGAGCAAATTAAACGGCCAGCCTATCACGGGTCACCGGCTTGCTGTTGAAG
 
. : . : . : . : . : . :
rJMFF011B04+ TTTTAGACGATGGCTTCTGTGATCAACTGCTCGTGAGCGCTAGCAACTGTCACGACTTGG
rJMFF028M06+ TTTTAGACGATGGCTTCTGTGATCAACTGCTCGTGAGCGCTAGCAACTGTCACGACTTGG
rJMFF040L12+ TTTTAGACGATGGCTTCTGTGATCAACTGCTCGTGAGCGCTAGCAACTGTCACGACTTGG
                      ____________________________________________________________
consensus TTTTAGACGATGGCTTCTGTGATCAACTGCTCGTGAGCGCTAGCAACTGTCACGACTTGG
 
. : . : . : . : . : . :
rJMFF011B04+ ATGATGATTCTGCTCCAAAAGGTGTCGATATGGTCAACAAAACGAAACTAAGTTTTGGTG
rJMFF028M06+ ATGATGATTCTGCTCCAAAAGGTGTCGATATGGTCAACAAAACGAAACTAAGTTTTGGTG
rJMFF040L12+ ATGATGATTCTGCTCCAAAAGGTGTCGATATGGTCAACAAAACGAAACTAAGTTTTGGTG
                      ____________________________________________________________
consensus ATGATGATTCTGCTCCAAAAGGTGTCGATATGGTCAACAAAACGAAACTAAGTTTTGGTG
 
. : . : . : . : . : . :
rJMFF011B04+ GTAGGCTTCAACCTCGCGCCTCATCAACTAAGTCATCAAAATCAAAGAAAGAAAGCATGC
rJMFF028M06+ GTAGGCTTCAACCTCGCGCCTCATCAACTAAGTCATCAAAATCAAAGAAAGAAAGCATGC
rJMFF040L12+ GTAGGCTTCAACCTCGCGCCTCATCAACTAAGTCATCAAAATCAAAGAAAGAAAGCATGC
                      ____________________________________________________________
consensus GTAGGCTTCAACCTCGCGCCTCATCAACTAAGTCATCAAAATCAAAGAAAGAAAGCATGC
 
. : . : . : . : . : . :
rJMFF011B04+ TCTCGAAGAAGGTTCGTAGGTTGTCTTCATTGACTGGTCCTCGCAAGCAAAATCGAGAGA
rJMFF028M06+ TCTCGAAGAAGGTTCGTAGGTTGTCTTCATTGACTGGTCCTCGCAAGCAAAATCGAGAGA
rJMFF040L12+ TCTCGAAGAAGGTTCGTAGGTTGTCTTCATTGACTGGTCCTCGCAAGCAAAATCGAGAGA
                      ____________________________________________________________
consensus TCTCGAAGAAGGTTCGTAGGTTGTCTTCATTGACTGGTCCTCGCAAGCAAAATCGAGAGA
 
. : . : . : . : . : . :
rJMFF011B04+ AGAACCCCACAGTACAACAGCTTAGAGGCCCCACAATAGCATGCGTTCCTTTGAAAGTGG
rJMFF028M06+ AGAACCCCACAGTACAACAGCTTAGAGGCCCCACAATAGCATGCGTTCCTTTGAAAGTGG
rJMFF040L12+ AGAACCCCACAGTACAACAGCTTAGAGGCCCCACAATAGCATGCGTTCCTTTGAAAGTGG
rJMFF045L23+ G
                      ____________________________________________________________
consensus AGAACCCCACAGTACAACAGCTTAGAGGCCCCACAATAGCATGCGTTCCTTTGAAAGTGG
 
. : . : . : . : . : . :
rJMFF011B04+ TGTTCAGTAGAATTAAAGCTGCGCTTAACAGTTCAATACGACCAGCCCACCGCCTTATCG
rJMFF028M06+ TGTTCAGTAGAATTAAAGCTGCGCTTAACAGTTCAATACGACCAGCCCACCGCCTTATCG
rJMFF040L12+ TGTTCAGTAGAATTAAAGCTGCGCTTAACAGTTCAATACGACCAGCCCACCGCCTTATCG
rJMFF045L23+ TGTTCAGTAGAATTAAAGCTGCGCTTAACAGTTCAATACGACCAGCCCACCGCCTTATCG
                      ____________________________________________________________
consensus TGTTCAGTAGAATTAAAGCTGCGCTTAACAGTTCAATACGACCAGCCCACCGCCTTATCG
 
. : . : . : . : . : . :
rJMFF011B04+ CACCCAGCATTGGTTGAATCTTCTTTCTTGGATTGAGCTTAGGTTTTGTGTGAAAGTTTG
rJMFF028M06+ CACCCAGCATTGGTTGAATCTTCTTTCTTGGATTGAGCTTAGGTTTTGTGTGAAAGTTTG
rJMFF040L12+ CACCCAGCATTGGTTGAATCTTCTTTCTTGGATTGAGCTTAGGTTTTGTGTGAAAGTTTG
rJMFF045L23+ CACCCAGCATTGGTTGAATCTTCTTTCTTGGATTGAGCTTAGGTTTTGTGTGAAAGTTTG
                      ____________________________________________________________
consensus CACCCAGCATTGGTTGAATCTTCTTTCTTGGATTGAGCTTAGGTTTTGTGTGAAAGTTTG
 
. : . : . : . : . : . :
rJMFF011B04+ GTTTGTAGGTGGCTTAGTATAGTATACCTGTTTCAAATGAAACATGGAGCTCTGTCCAGG
rJMFF028M06+ GTTTGTAGGTGGCTTAGTATAGTATACCTGTTTCAAATGAAACATGGAGCTCTGTCCAGG
rJMFF040L12+ GTTTGTAGGTGGCTTAGTATAGTATACCTGTTTCAAATGAAACATGGAGCTCTGTCCAGG
rJMFF045L23+ GTTTGTAGGTGGCTTAGTATAGTATACCTGTTTCAAATGAAACATGGAGCTCTGTCCAGG
                      ____________________________________________________________
consensus GTTTGTAGGTGGCTTAGTATAGTATACCTGTTTCAAATGAAACATGGAGCTCTGTCCAGG
 
. : . : . : . : . : . :
rJMFF011B04+ TTGGGCTGCTTTTGCGGTGTACATAAAATTTAAGGTTAGGTACTTAGCTGAAGGTGTAAA
rJMFF028M06+ TTGGGCTGCTTTTGCGGTGTACATAAAATTTAAGGTTAGGTACTTAGCTGAAGGTGTAAA
rJMFF040L12+ TTGGGCTGCTTTTGCGGTGTACATAAAATTTAAGGTTAGGTACTTAGCTGAAGGTGTAAA
rJMFF045L23+ TTGGGCTGCTTTTGCGGTGTACATAAAATTTAAGGTTAGGTACTTAGCTGAAGGTGTAAA
                      ____________________________________________________________
consensus TTGGGCTGCTTTTGCGGTGTACATAAAATTTAAGGTTAGGTACTTAGCTGAAGGTGTAAA
 
. : . : . : . : . : . :
rJMFF011B04+ GAACAGTGGATTTGATGTTGGGTTTTGGTGATGTTTTAACAACTCTGATGTTCTTTAGTT
rJMFF028M06+ GAACAGTGGATTTGATGTTGGGTTTTGGTGATGTTTTAACAACTCTGATGTTCTTTAGTT
rJMFF040L12+ GAACAGTGGATTTGATGTTGGGTTTTGGTGATGTTTTAACAACTCTGATGTTCTTTAGTT
rJMFF045L23+ GAACAGTGGATTTGATGTTGGGTTTTGGTGATGTTTTAACAACTCTGATGTTCTTTAGTT
                      ____________________________________________________________
consensus GAACAGTGGATTTGATGTTGGGTTTTGGTGATGTTTTAACAACTCTGATGTTCTTTAGTT
 
. : . : . : . : . : . :
rJMFF011B04+ TTTGGAACTGAGTTTATATTTGCTTTCCCCTTCTCCATTATGTGGCCCTTTAGAACTATT
rJMFF028M06+ TTTGGAACTGAGTTTATATTTGCTTTCCCCTTCTCCATTATGTGGCCCTTTAGAACTATT
rJMFF040L12+ TTTGGAACTGAGTTTATATTTGCTTTCCCCTTCTCCATTATGTGGCCCTTTAGAACTATT
rJMFF045L23+ TTTGGAACTGAGTTTATATTTGCTTTCCCCTTCTCCATTATGTGGCCCTTTAGAACTATT
                      ____________________________________________________________
consensus TTTGGAACTGAGTTTATATTTGCTTTCCCCTTCTCCATTATGTGGCCCTTTAGAACTATT
 
. : . : . : . : . : . :
rJMFF011B04+ GCAAATGGTTTTGAGTTCTATTCTTATCATAGTCCTCACC
rJMFF028M06+ GCAAATGGTTTTGAGTTCTATTCTTATCATAGTCCTCACC
rJMFF040L12+ GCAAATGGTTTTGAGTTCTATTCTTATCATAGTCCTCACC
rJMFF045L23+ GCAAATGGTTTTGAGTTCTATTCTTATCATAGTCCTCACCACTGGTGAAATTTGAATTTT
                      ____________________________________________________________
consensus GCAAATGGTTTTGAGTTCTATTCTTATCATAGTCCTCACCACTGGTGAAATTTGAATTTT