Contig 001207:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF025E21Sequence558005251 (6)emb|CDP02510.1|1e-82unnamed protein product [Coffea canephora]740001207 (6)emb|CDP02510.1|3e-74unnamed protein product [Coffea canephora]
JMFF025P15Sequence527005251 (6)emb|CDP02510.1|1e-73unnamed protein product [Coffea canephora]786001207 (6)emb|CDP02510.1|6e-85unnamed protein product [Coffea canephora]
JMFF035B16Sequence572005251 (6)emb|CDP02510.1|8e-85unnamed protein product [Coffea canephora]789001207 (6)emb|CDP02510.1|1e-86unnamed protein product [Coffea canephora]
JMFF045K01Sequence557005251 (6)emb|CDP02510.1|6e-82unnamed protein product [Coffea canephora]648001207 (6)emb|CDP02510.1|4e-43unnamed protein product [Coffea canephora]
JMSF033F20Sequence725005251 (6)emb|CDP02510.1|1e-122unnamed protein product [Coffea canephora]750001207 (6)emb|CDP02510.1|9e-77unnamed protein product [Coffea canephora]
JMSF041K24Sequence796005251 (6)emb|CDP02510.1|1e-83unnamed protein product [Coffea canephora]623001207 (6)emb|CDP02510.1|1e-33unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF035B16+ GAAG
                      ____________________________________________________________
consensus GAAG
 
. : . : . : . : . : . :
rJMSF033F20+ GAAAATGAGCCTGGAGATCCTGGGGTGGTGC
rJMFF035B16+ GAATCGCTTACCAGTGGAGATACATGGTGGAAAATGAGCCTGGAGATCCTGGGGTGGTGC
rJMFF025P15+ AATCGCTTACCAGTGGAGATACATGGTGGAAAATGAGCCTGGAGATCCTGGGGTGGTGC
rJMFF025E21+ CCTGGGGTGGTGC
                      ____________________________________________________________
consensus GAATCGCTTACCAGTGGAGATACATGGTGGAAAATGAGCCTGGAGATCCTGGGGTGGTGC
 
. : . : . : . : . : . :
rJMSF033F20+ CTGGCTCGTGCTCCAATAGAAAGGAATCAAAGCCTCTTAATTCGAGAAGTGCCTCGCTCT
rJMFF035B16+ CTGGCTCGTGCTCCAATAGAAAGGAATCAAAGCCTCTTAATTCGAGAAGTGCCTCGCTCT
rJMFF025P15+ CTGGCTCGTGCTCCAATAGAAAGGAATCAAAGCCTCTTAATTCGAGAAGTGCCTCGCTCT
rJMFF025E21+ CTGGCTCGTGCTCCAATAGAAAGGAATCAAAGCCTCTTAATTCGAGAAGTGCCTCGCTCT
                      ____________________________________________________________
consensus CTGGCTCGTGCTCCAATAGAAAGGAATCAAAGCCTCTTAATTCGAGAAGTGCCTCGCTCT
 
. : . : . : . : . : . :
rJMSF033F20+ TTCTAATGAATTACTTCCCTACAATTCCTGCTCAAAATGAAGTTTGCAAAGAACATTCTA
rJMSF041K24+ TTGCAAAGAACATTCTA
rJMFF035B16+ TTCTAATGAATTACTTCCCTACAATTCCTGCTCAAAATGAAGTTTGCAAAGAACATTCTA
rJMFF025P15+ TTCTAATGAATTACTTCCCTACAATTCCTGCTCAAAATGAAGTTTGCAAAGAACATTCTA
rJMFF025E21+ TTCTAATGAATTACTTCCCTACAATTCCTGCTCAAAATGAAGTTTGCAAAGAACATTCTA
                      ____________________________________________________________
consensus TTCTAATGAATTACTTCCCTACAATTCCTGCTCAAAATGAAGTTTGCAAAGAACATTCTA
 
. : . : . : . : . : . :
rJMSF033F20+ CTCCACTAGCTGATATGGTTGGCACTTGTTATAAAGCAGCCGGGAATTTGATGCCAAATT
rJMSF041K24+ CTCCACTAGCTGATATGGTTGGCACTTGTTATAAAGCAGCCGGGAATTTGATGCCAAATT
rJMFF035B16+ CTCCACTAGCTGATATGGTTGGCACTTGTTATAAAGCAGCCGGGAATTTGATGCCAAATT
rJMFF025P15+ CTCCACTAGCTGATATGGTTGGCACTTGTTATAAAGCAGCCGGGAATTTGATGCCAAATT
rJMFF025E21+ CTCCACTAGCTGATATGGTTGGCACTTGTTATAAAGCAGCCGGGAATTTGATGCCAAATT
rJMFF045K01+ GATATGGTTGGCACTTGTTATAAAGCAGCCGGGAATNTGATGCCAAATT
                      ____________________________________________________________
consensus CTCCACTAGCTGATATGGTTGGCACTTGTTATAAAGCAGCCGGGAATTTGATGCCAAATT
 
. : . : . : . : . : . :
rJMSF033F20+ TTGTGGCAGTAAACCTTTACATGAGGAGCGATGGAGGGGGTG-TTTTTGATGATTTGGAT
rJMSF041K24+ TTGTGGCAGTAAACTTTTACATGAGGAGCGATGGAGGGGGTGTTTTTTGATGATTTGGAT
rJMFF035B16+ TTGTGGCAGTAAACTTTTACATGAGGAGCGATGGAGGGGGTG-TTTTTGATGATTTGGAT
rJMFF025P15+ TTGTGGCAGTAAACTTTTACATGAGGAGCGATGGAGGGGGTG-TTTTTGATGATTTGGAT
rJMFF025E21+ TTGTGGCAGTAAACTTTTACATGAGGAGCGATGGAGGGGGTG-TTTTTGATGATTTGGAT
rJMFF045K01+ TTGTGGCAGTAAACTTTTACATGAGGAGCGATGGAGGGGGTG-TTTTTGATGATTTGGAT
                      ____________________________________________________________
consensus TTGTGGCAGTAAACTTTTACATGAGGAGCGATGGAGGGGGTG-TTTTTGATGATTTGGAT
 
. : . : . : . : . : . :
rJMSF033F20+ CGAATGGATGGTCAGTCTTTGTGCGGCTGCACTACAATAACTGCTTGCCAGGCAGGAGAA
rJMSF041K24+ CGAATGAATGGTCAGTCTTTGTGCGGCTGCACTACAATAACTGCTTGCCAGGCAGGAGAA
rJMFF035B16+ CGAATGAATGGTCAGTCTTTGTGCGGCTGCACTACAATAACTGCTTGCCAGGCAGGAGAA
rJMFF025P15+ CGAATGAATGGTCAGTCTTTGTGCGGCTGCACTACAATAACTGCTTGCCAGGCAGGAGAA
rJMFF025E21+ CGAATGAATGGTCAGTCTTTGTGCGGCTGCACTACAATAACTGCTTGCCAGGCAGGAGAA
rJMFF045K01+ CGAATGAATGGTCAGTCTTTGTGCGGCTGCACTACAATAACTGCTTGCCAGGCAGGAGAA
                      ____________________________________________________________
consensus CGAATGAATGGTCAGTCTTTGTGCGGCTGCACTACAATAACTGCTTGCCAGGCAGGAGAA
 
. : . : . : . : . : . :
rJMSF033F20+ CATTTTGGAGTTTGCAAGAATGTTGCTGCATCTAATACAACTCCAGGGACAACTGACCCT
rJMSF041K24+ CATTTTGGAGTTTGCAAGAATGTTGCTGCATCTAATACAACTCCAGGGACAACTGACCCT
rJMFF035B16+ CATTTTGGAGTTTGCAAGAATGTTGCTGCATCTAATACAACTCCAGGGACAACTGACCCT
rJMFF025P15+ CATTTTGGAGTTTGCAAGAATGTTGCTGCATCTAATACAACTCCAGGGACAACTGACCCT
rJMFF025E21+ CATTTTGGAGTTTGCAAGAATGTTGCTGCATCTAATACAACTCCAGGGACAACTGACCCT
rJMFF045K01+ CATTTTGGAGTTTGCAAGAATGTTGCTGCATCTAATACAACTCCAGGGACAACTGACCCT
                      ____________________________________________________________
consensus CATTTTGGAGTTTGCAAGAATGTTGCTGCATCTAATACAACTCCAGGGACAACTGACCCT
 
. : . : . : . : . : . :
rJMSF033F20+ GCAGGAAGCTTTTCTGGGTCTGTGCAATTGACAGGGTCTGCTTCAGCCATCAAAGTCGAA
rJMSF041K24+ GCAGGAAGCTTTTCTGGGTCTGTGCAATTGACAGGGTCTGCTTCAGCCATCAAAGTCGAA
rJMFF035B16+ GCAGGAAGCTTTTCTGGGTCTGTGCAATTGACAGGGTCTGCTTCAGCCATCAAAGTCGAA
rJMFF025P15+ GCAGGAAGCTTTTCTGGGTCTGTGCAATTGACAGGGTCTGCTTCAGCCATCAAAGTCGAA
rJMFF025E21+ GCAGGAAGCTTTTCTGGGTCTGTGCAATTGACAGGGTCTGCTTCAGCCATCAAAGTCGAA
rJMFF045K01+ GCAGGAAGCTTTTCTGGGTCTGTGCAATTGACAGGGTCTGCTTCAGCCATCAAAGTCGAA
                      ____________________________________________________________
consensus GCAGGAAGCTTTTCTGGGTCTGTGCAATTGACAGGGTCTGCTTCAGCCATCAAAGTCGAA
 
. : . : . : . : . : . :
rJMSF033F20+ AGTATATTTTACGCGTTCTTTCTCTTCTGGCCTGTGGTGTTGTTGTTTCTCGTATGATTA
rJMSF041K24+ AGTATATTTTACGCGTTCTTTCTCTTCTGGCCTGTGGTGTTGTTGTTTCTCGTATGATTA
rJMFF035B16+ AGTATATTTTACGCGTTCTTTCTCTTCTGGCCTGTGGTGTTGTTGTTTCTCGTATGATTA
rJMFF025P15+ AGTATATTTTACGCGTTCTTTCTCTTCTGGCCTGTGGTGTTGTTGTTTCTCGTATGATTA
rJMFF025E21+ AGTATATTTTACGCGTTCTTTCTCTTCTGGCCTGTGGTGTTGTTGTTTCTCGTATGATTA
rJMFF045K01+ AGTATATTTTACGCGTTCTTTCTCTTCTGGCCTGTGGTGTTGTTGTTTCTCGTATGATTA
                      ____________________________________________________________
consensus AGTATATTTTACGCGTTCTTTCTCTTCTGGCCTGTGGTGTTGTTGTTTCTCGTATGATTA
 
. : . : . : . : . : . :
rJMSF033F20+ GCGGGAAGTGATCGAGTTCTATGGTAGAATGTGTTGCTGCATTGTTGAGTGCTGGTTAGG
rJMSF041K24+ GCGGGAAGTGATCGAGTTCTATGGTAGAATGTGTTGCTGCATTGTTGAGTGCTGGTTAGG
rJMFF035B16+ GCGGGAAGTGATCGAGTTCTATGGTAGAATGTGTTGCTGCATTGTTGAGTGCTGGTTAGG
rJMFF025P15+ GCGGGAAGTGATCGAGTTCTATGGTAGAATGTGTTGCTGCATTGTTGAGTGCTGGTTAGG
rJMFF025E21+ GCGGGAAGTGATCGAGTTCTATGGTAGAATGTGTTGCTGCATTGTTGAGTGCTGGTTAGG
rJMFF045K01+ GCGGGAAGTGATCGAGTTCTATGGTAGAATGTGTTGCTGCATTGTTGAGTGCTGGTTAGG
                      ____________________________________________________________
consensus GCGGGAAGTGATCGAGTTCTATGGTAGAATGTGTTGCTGCATTGTTGAGTGCTGGTTAGG
 
. : . : . : . : . : . :
rJMSF033F20+ CCTTCACTGTGTAAAGTTTTGAGTCAGAAAGGTACTCATTTTGGCCTGTTAAAACTAGAA
rJMSF041K24+ CCTTCACTGTGTAAAGTTTTGAGTCAGAAAGGTACTCATTTTGGCCTGTTAAAACTAGAA
rJMFF035B16+ CCTTCACTGTGTAAAGTTTTGAGTCAGAAAGGTACTCATTTTGGCCTGTTAAAACTAGAA
rJMFF025P15+ CCTTCACTGTGTAAAGTTTTGAGTCAGAAAGGTACTCATTTTGGCCTGTTAAAACTAGAA
rJMFF025E21+ CCTTCACTGTGTAAAGTTTTGAGTCAGAAAGGTACTCATTTTGGCCTGTTAAAACTAGAA
rJMFF045K01+ CCTTCACTGTGTAAAGTTTTGAGTCAGAAAGGTACTCATTTTGGCCTGTTAAAACTAGAA
                      ____________________________________________________________
consensus CCTTCACTGTGTAAAGTTTTGAGTCAGAAAGGTACTCATTTTGGCCTGTTAAAACTAGAA
 
. : . : . : . : . : . :
rJMSF033F20+ AACATTCACCTTAGAATGTTAAGGCAAAAGTCTAGGTAATCAGTGTTATAGTTTAGCAGA
rJMSF041K24+ AACATTCACCTTAGAATGTTAAGGCAAAAGTCTAGGTAATCAGTGTTATAGTTTAGCAGA
rJMFF035B16+ AACATTCACCTTAGAATGTTAAGGCAAAAGTCTAGGTAATCAGTGTTATAGTTTAGCAGA
rJMFF025P15+ AACATTCACCTTAGAATGTTAAGGCAAAAGTCTAGGTAATCAGTGTTATAGTTTAGCAGA
rJMFF025E21+ AACATTCACCTTAGAATGTTAAGGCAAAAGTCTAGGTAATCAGTGTTATAGTTTAGCAGA
rJMFF045K01+ AACATTCACCTTAGAATGTTAAGGCAAAAGTCTAGGTAATCAGTGTTATAGTTTAGCAGA
                      ____________________________________________________________
consensus AACATTCACCTTAGAATGTTAAGGCAAAAGTCTAGGTAATCAGTGTTATAGTTTAGCAGA
 
. : . : . : . : . : . :
rJMSF033F20+ GATGGCTACAGCCTGCAACAAGTAAACTGTACTCAACAT
rJMSF041K24+ GATGGCTACAGCCTGCAACAAGTAAACTGTACTCAACAT
rJMFF035B16+ GATGGCTACAGCCTGCAACAAGTAAACTGTACTCAACATTATCCAGA
rJMFF025P15+ GATGGCTACAGCCTGCAACAAGTAAACTGTACTCAACATTATCCAGA-TTTGTGTTTA
rJMFF025E21+ GATGGCTACAGCCTGCAACAAGTAAACTGTACTCAACATTATCCAGA-TTTGTGTTTA
rJMFF045K01+ GATGGCTACAGCCTGCAACAAGTAAACTGTACTCAACATTATCCAGAGTTTGTGTTTATA
                      ____________________________________________________________
consensus GATGGCTACAGCCTGCAACAAGTAAACTGTACTCAACATTATCCAGA-TTTGTGTTTATA
 
. : . : . : . : . : . :
rJMFF045K01+ AAACCCCCCATGATTTTTCAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
                      ____________________________________________________________
consensus AAACCCCCCATGATTTTTCAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG