Contig 001203:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF045D17Sequence647004941 (5)ref|XP_009610243.1|1e-89PREDICTED: protein farnesyltransferase subunit beta isoform X3 [Nicotiana tomen605001203 (5)gb|AAB38796.1|8e-44farnesyltransferase beta subunit, partial [Nicotiana glutinosa]
JMFF045N15Sequence647004941 (5)ref|XP_009610243.1|3e-85PREDICTED: protein farnesyltransferase subunit beta isoform X3 [Nicotiana tomen578001203 (5)gb|AAB38796.1|1e-43farnesyltransferase beta subunit, partial [Nicotiana glutinosa]
JMSF001H10Sequence481004941 (5)ref|XP_009610243.1|1e-57PREDICTED: protein farnesyltransferase subunit beta isoform X3 [Nicotiana tomen683001203 (5)ref|XP_010315876.1|1e-49PREDICTED: farnesyl protein transferase subunit B isoform X2 [Solanum lycopersi
JMSF004L07Sequence385004941 (5)emb|CDI30234.1|2e-35protein farnesyltransferase beta-subunit [Nicotiana tabacum]381001203 (5)gb|AAB38796.1|2e-38farnesyltransferase beta subunit, partial [Nicotiana glutinosa]
JMSF033A16Sequence606004941 (5)ref|XP_009610243.1|7e-54PREDICTED: protein farnesyltransferase subunit beta isoform X3 [Nicotiana tomen701001203 (5)gb|AAB69757.1|9e-66farnesyl-protein transferase beta subunit [Solanum lycopersicum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF033A16+ AGGAGTGGAAGGTGGATTCCAAGGGAGAACAAATAAGTTGGTAGATG
                      ____________________________________________________________
consensus AGGAGTGGAAGGTGGATTCCAAGGGAGAACAAATAAGTTGGTAGATG
 
. : . : . : . : . : . :
rJMSF033A16+ GNTGCTATTCATTTTGGCAGGGTGGAGTGGCTGCGATATTACAAAGATTGCATTTGAATG
rJMSF001H10+ TGGCAGGGTGGAGTGGCTGCGATATTACAAAGATTGCATTTGAATG
                      ____________________________________________________________
consensus GNTGCTATTCATTTTGGCAGGGTGGAGTGGCTGCGATATTACAAAGATTGCATTTGAATG
 
. : . : . : . : . : . :
rJMSF033A16+ CTATGGAGTGTGACTCTGTCACAGGGAGTGACCATGGTTCTGTTGCATCTAGTTCCTCTG
rJMSF001H10+ CTATGGAGTGTGACTCTGTCACAGGGAGTGACCATGGTTCTGTTGCATCTAGTTCCTCTG
                      ____________________________________________________________
consensus CTATGGAGTGTGACTCTGTCACAGGGAGTGACCATGGTTCTGTTGCATCTAGTTCCTCTG
 
. : . : . : . : . : . :
rJMSF033A16+ ATGGAGAAGACCACCTTGAAGGAACATCCACTCACACGGATGAATCTTTTCATCTCAGGC
rJMSF001H10+ ATGGAGAAGACCACCTTGAAGGAACATCCACTCACACGGATGAATCTTTTCATCTCAGGC
rJMFF045N15+ CAGGC
rJMFF045D17+ CAGGC
                      ____________________________________________________________
consensus ATGGAGAAGACCACCTTGAAGGAACATCCACTCACACGGATGAATCTTTTCATCTCAGGC
 
. : . : . : . : . : . :
rJMSF033A16+ AGGGAGCTGGACCAGGCCATGATGCTTTTGAACCAGTGAAGAACTTGAACAACATTGGTT
rJMSF001H10+ AGGGAGCTGGACCAGGCCATGATGCTTTTGAACCAGTGAAGAACTTGAACAACATTGGTT
rJMFF045N15+ AGGGAGCTGGACCAGGCCATGATGCTTTTGAACCAGTGAAGAACTTGAACAACATTGGTT
rJMFF045D17+ AGGGAGCTGGACCAGGCCATGATGCTTNTGAACCAGTGAAGAACTTGAACAACATTGGTT
                      ____________________________________________________________
consensus AGGGAGCTGGACCAGGCCATGATGCTTTTGAACCAGTGAAGAACTTGAACAACATTGGTT
 
. : . : . : . : . : . :
rJMSF033A16+ ATGAGTTTATCAATGGACATGCTTCTAGGAGACCTCTATTTGACAACCTAAATTTGCAAC
rJMSF001H10+ ATGAGTTTATCAATGGACATGCTTNTAGGAGACCTCTATTTGACAACCTAAATTTGCAAC
rJMFF045N15+ ATGAGTTTATCAATGGACATGCTTCTAGGAGACCTCTATTTGACAACCTAAATTTGCAAC
rJMSF004L07+ CTCTATTTGACAACCTAAATTTGCAAC
rJMFF045D17+ ATGAGTTTATCAATGGACATGCTTCTAGGAGACCTCTATTTGACAACCTAAATTTGCAAC
                      ____________________________________________________________
consensus ATGAGTTTATCAATGGACATGCTTCTAGGAGACCTCTATTTGACAACCTAAATTTGCAAC
 
. : . : . : . : . : . :
rJMSF033A16+ GCTACATCATACTTTGCTCACAGGTAGAGGGCGGTTTCAGGGACAAACCAGGGAAGGCCA
rJMSF001H10+ GCTACATCATACTTTGCTCACAGGTAGAGGGCGGTTTCAGGGACAAACCAGGGAAGGCCA
rJMFF045N15+ GCTACATCATACTTTGCTCACAGGTAGAGGGCGGTTTCAGGGACAAACCAGGGAAGGCCA
rJMSF004L07+ GCTACATCATACTTTGCTCACAGGTAGAGGGCGGTTTCAGGGACAAACCAGGGAAGGCCA
rJMFF045D17+ GCTACATCATACTTTGCTCACAGGTAGAGGGCGGTTTCAGGGACAAACCAGGGAAGGCCA
                      ____________________________________________________________
consensus GCTACATCATACTTTGCTCACAGGTAGAGGGCGGTTTCAGGGACAAACCAGGGAAGGCCA
 
. : . : . : . : . : . :
rJMSF033A16+ GAGATCACTACCATACATGTTACTGCCTGAGTGGTCTTTCGATTTCTCAGTATAGCTGTG
rJMSF001H10+ GAGATCACTACCATACATGTTACTGCCTGAGTGGTCTTTCGATTTCTCAGTATAGCTGTG
rJMFF045N15+ GAGATCACTACCATACATGTTACTGCCTGAGTGGTCTTTCGATTTCTCAGTATAGCTGTG
rJMSF004L07+ GAGATCACTACCATACATGTTACTGCCTGAGTGGTCTTTCGATTTCTCAGTATAGCTGTG
rJMFF045D17+ GAGATCACTACCATACATGTTACTGCCTGAGTGGTCTTTCGATTTCTCAGTATAGCTGTG
                      ____________________________________________________________
consensus GAGATCACTACCATACATGTTACTGCCTGAGTGGTCTTTCGATTTCTCAGTATAGCTGTG
 
. : . : . : . : . : . :
rJMSF033A16+ CAAGTGATTTTGGCACTCCGCCTTTGCCCCGGGACATCTTGGGTCCTTATTCCAACAACC
rJMSF001H10+ CAAGTGATTTTGGCACTCCGCCTTTGCCCCGGGACATCTTGGGTCCTTATTCCAACAACC
rJMFF045N15+ CAAGTGATTTTGGCACTCCGCCTTTGCCCCGGGACATCTTGGGTCCTTATTCCAACAACC
rJMSF004L07+ CAAGTGATTTTGGCACTCCGCCTTTGCCCCGGGACATCTTGGGTCCTTATTCCAACAACC
rJMFF045D17+ CAAGTGATTTTGGCACTCCGCCTTTGCCCCGGGACATCTTGGGTCCTTATTCCAACAACC
                      ____________________________________________________________
consensus CAAGTGATTTTGGCACTCCGCCTTTGCCCCGGGACATCTTGGGTCCTTATTCCAACAACC
 
. : . : . : . : . : . :
rJMSF033A16+ TAGTCGAACGGATTCACCCTCTATTCAACATTGTCATAGATTGTTACTATGAGGCTCGTG
rJMSF001H10+ TAGTCGAACGGATTCACCCTCTATTCAACATTGTCATAGATTGTTACTATGAGGCTCGTG
rJMFF045N15+ TAGTCGAACGGATTCACCCTCTATTCAACATTGTCATAGATTGTTACTATGAGGCTCGTG
rJMSF004L07+ TAGTCGAACGGATTCACCCTCTATTCAACATTGTCATAGATTGTTACTATGAGGCTCGTG
rJMFF045D17+ TAGTCGAACGGATTCACCCTCTATTCAACATTGTCATAGATTGTTACTATGAGGCTCGTG
                      ____________________________________________________________
consensus TAGTCGAACGGATTCACCCTCTATTCAACATTGTCATAGATTGTTACTATGAGGCTCGTG
 
. : . : . : . : . : . :
rJMSF033A16+ AATTCTTCTCAGGTCTGTGAGGATCTTTTCCCTTTTTTTTTGTACCATAACATGTACTCC
rJMSF001H10+ AATTNTTCTCAGGTCTGTGAGGATCTTTTCCCTTTTTTTTTGTACCATAACATGTACTCC
rJMFF045N15+ AATTCTTCTCAGGTCTGTGAGGATCTTTTCCCTTTTTTTTTGTACCATAACATGTACTCC
rJMSF004L07+ AATTCTTCTCAGGTCTGTGAGGATCTTTTCCCTTTTTTTTTGTACCATAACATGTACTCC
rJMFF045D17+ AATTCTTCTCAGGTCTGTGAGGATCTTTTCCCTTTTTTTTTGTACCATAACATGTACTCC
                      ____________________________________________________________
consensus AATTCTTCTCAGGTCTGTGAGGATCTTTTCCCTTTTTTTTTGTACCATAACATGTACTCC
 
. : . : . : . : . : . :
rJMSF033A16+ GTACAATGGTTTCCCTCCAGTGTCCTTCCACAGCAGCGCCGTGAGGGAAGGATT
rJMSF001H10+ GTACAATGGTTTCCCTCCAGTGTCCTTCCACAGCAGCGCCGTGAGGGAAGGATTTGCAGT
rJMFF045N15+ GTACAATGGTTTCCCTCCAGTGTCCTTCCACAGCAGCGCCGTGAGGGAAGGATTTGCAGT
rJMSF004L07+ GTACAATGGTTTCCCTCCAGTGTCCTTCCACAGCAGCGCCGTGAGGGAAGGATT
rJMFF045D17+ GTACAATGGTTTCCCTCCAGTGTCCTTCCACAGCAGCGCCGTGAGGGAAGGATTTGCAGT
                      ____________________________________________________________
consensus GTACAATGGTTTCCCTCCAGTGTCCTTCCACAGCAGCGCCGTGAGGGAAGGATTTGCAGT
 
. : . : . : . : . : . :
rJMSF001H10+ GTTTATTATAGTGAAATTACTTGTTCGAAATCCTTCC
rJMFF045N15+ GTTTATTATAGTGAAATTACTTGTTCGAAATCCTTCCTATATATATTTTTTTTTCCATCA
rJMFF045D17+ GTTTATTATAGTGAAATTACTTGTTCGAAATCCTTCCTATATATATTTTTTTTTCCATCA
                      ____________________________________________________________
consensus GTTTATTATAGTGAAATTACTTGTTCGAAATCCTTCCTATATATATTTTTTTTTCCATCA
 
. : . : . : . : . : . :
rJMFF045N15+ AATTATAGGCGCCGTACTACATCTTTTTGTGCC
rJMFF045D17+ AATAATAGGCGCCGTACTACATCTTTTTGTGCCAAAAAAAAAAAAAAAACTCTCCAGGGT
                      ____________________________________________________________
consensus AATTATAGGCGCCGTACTACATCTTTTTGTGCCAAAAAAAAAAAAAAAACTCTCCAGGGT