Contig 001193:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF019D03Sequence553007467 (2)ref|XP_009624004.1|2e-67PREDICTED: golgin candidate 5 [Nicotiana tomentosiformis] ref|XP_009624005.1| PR783001193 (3)ref|XP_009624004.1|2e-91PREDICTED: golgin candidate 5 [Nicotiana tomentosiformis] ref|XP_009624005.1| PR
JMFF043M11Sequence631007467 (2)ref|XP_011099825.1|2e-82PREDICTED: uncharacterized protein LOC105178143 isoform X2 [Sesamum indicum] re640001193 (3)ref|XP_007046717.1|3e-47Uncharacterized protein isoform 1 [Theobroma cacao] ref|XP_007046718.1| Uncharac
JMFN038M20Sequence433001193 (3)gb|KDP46723.1|1e-13hypothetical protein JCGZ_06511 [Jatropha curcas]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF019D03+ TGTGAA
                      ____________________________________________________________
consensus TGTGAA
 
. : . : . : . : . : . :
rJMFF019D03+ GGTGACGATAGGAGAGGAAGAGATTNGAAAGAAGGCACTCCAAATCGAAAACATGTCTGT
                      ____________________________________________________________
consensus GGTGACGATAGGAGAGGAAGAGATTNGAAAGAAGGCACTCCAAATCGAAAACATGTCTGT
 
. : . : . : . : . : . :
rJMFF019D03+ AAAATTAGAAGAGATGGAAAGGTTTGCACTGGGCACGAATTGTATCATAAACGAGATGCG
                      ____________________________________________________________
consensus AAAATTAGAAGAGATGGAAAGGTTTGCACTGGGCACGAATTGTATCATAAACGAGATGCG
 
. : . : . : . : . : . :
rJMFF019D03+ CCAGAGAGTTGAGGATCTAGTTGAAGAAACTTCTAGACAGAGACAAAGAGCCTCGGAAAA
                      ____________________________________________________________
consensus CCAGAGAGTTGAGGATCTAGTTGAAGAAACTTCTAGACAGAGACAAAGAGCCTCGGAAAA
 
. : . : . : . : . : . :
rJMFF019D03+ TGATGAGGAGCTTTGTCGCGTCAAGCAAGACTTTGAATCTCTCAAATCCTATGTTAGTAG
rJMFF043M11+ AAGCAAGACTTTGAATCTCTCAAATCCTATGTTAGTAG
                      ____________________________________________________________
consensus TGATGAGGAGCTTTGTCGCGTCAAGCAAGACTTTGAATCTCTCAAATCCTATGTTAGTAG
 
. : . : . : . : . : . :
rJMFF019D03+ TCTCATTAGCGTGAGAGAAACTCTCCTTTCATCTGAAAAGCAGTTCCAGACAATCGAAAG
rJMFF043M11+ TCTCATTAGCGTGAGAGAAACTCTCCTTTCATCTGAAAAGCAGTTCCAGACAATCGAAAG
                      ____________________________________________________________
consensus TCTCATTAGCGTGAGAGAAACTCTCCTTTCATCTGAAAAGCAGTTCCAGACAATCGAAAG
 
. : . : . : . : . : . :
rJMFF019D03+ GCTCTTTGAACGGCTGGTCGCGAAAACAACTCAGTTGGAGAGCGAGAAGGCACAGAAAGA
JMFN038M20- AAAGA
rJMFF043M11+ GCTCTTTGAACGGCTGGTCGCGAAAACAACTCAGTTGGAGAGCGAGAAGGCACAGAAAGA
                      ____________________________________________________________
consensus GCTCTTTGAACGGCTGGTCGCGAAAACAACTCAGTTGGAGAGCGAGAAGGCACAGAAAGA
 
. : . : . : . : . : . :
rJMFF019D03+ GGCTGAAGTCCAGAAACTCATGGAAGAGAACGTGAAGTTGACTGCGTTACTGGACAAGAA
JMFN038M20- GGCTGAAGTCCAGAAACTCATGGAAGAGAACGTGAAGTTGACTGCGTTACTGGACAAGAA
rJMFF043M11+ GGCTGAAGTCCAGAAACTCATGGAAGAGAACGTGAAGTTGACTGCGTTACTGGACAAGAA
                      ____________________________________________________________
consensus GGCTGAAGTCCAGAAACTCATGGAAGAGAACGTGAAGTTGACTGCGTTACTGGACAAGAA
 
. : . : . : . : . : . :
rJMFF019D03+ AGAGGCCCAACTCCTGGCCATGAATCAGCAATGCAAGCTCATGGCACTTAGTGCTTTAAA
JMFN038M20- AGAGGCCCAACTCCTGGCCATGAATCAGCAATGCAAGCTCATGGCACTTAGTGCTTTAAA
rJMFF043M11+ AGAGGCCCAACTCCTGGCCATGAATCAGCAATGCAAGCTCATGGCACTTAGTGCTTTAAA
                      ____________________________________________________________
consensus AGAGGCCCAACTCCTGGCCATGAATCAGCAATGCAAGCTCATGGCACTTAGTGCTTTAAA
 
. : . : . : . : . : . :
rJMFF019D03+ TGGCTAGTCTGCCACACTTACACAGGCATTTGTGCCCCCGCTTTTATCACATTCAACCCA
JMFN038M20- TGGCTAGTCTGCCACACTTACACAGGCATTTGTGCCCCCGCTTTTATCACATTCAACCCA
rJMFF043M11+ TGGCTAGTCTGCCACACTTACACAGGCATTTGTGCCCCCGCTTTTATCACATTCAACCCA
                      ____________________________________________________________
consensus TGGCTAGTCTGCCACACTTACACAGGCATTTGTGCCCCCGCTTTTATCACATTCAACCCA
 
. : . : . : . : . : . :
rJMFF019D03+ CCTGTTGGCCTTCCAGCAGATTTAGGTGAGTGGAGCTGTAGAATTCTGTAAAGGTTCCTT
JMFN038M20- CCTGTTGGCCTTCCAGCAGATTTAGGTGAGTGGAGCTGTAGAATTCTGTAAAGGTTCCTT
rJMFF043M11+ CCTGTTGGCCTTCCAGCAGATTTAGGTGAGTGGAGCTGTAGAATTCTGTAAAGGTTCCTT
                      ____________________________________________________________
consensus CCTGTTGGCCTTCCAGCAGATTTAGGTGAGTGGAGCTGTAGAATTCTGTAAAGGTTCCTT
 
. : . : . : . : . : . :
rJMFF019D03+ CTTTTTTTCTCGTGGTTTTAATGGGTGAAACCCAAATGCGTAGTCGTTTTATGTTGGTTG
JMFN038M20- CTTTTTTTCTCGTGGTTTTAATGGGTGAAACCCAAATGCGTAGTCGTTTTATGTTGGTTG
rJMFF043M11+ CTTTTTTTCTCGTGGTTTTAATGGGTGAAACCCAAATGCGTAGTCGTTTTATGTTGGTTG
                      ____________________________________________________________
consensus CTTTTTTTCTCGTGGTTTTAATGGGTGAAACCCAAATGCGTAGTCGTTTTATGTTGGTTG
 
. : . : . : . : . : . :
rJMFF019D03+ GCTGATTGGGCAATTTGCCAAAGGAAATTAAAACACCTTTAGATCTGATACAGAACTTTG
JMFN038M20- GCTGATTGGGCAATTTGCCAAAGGAAATTAAAACACCTTTAGATCTGATACAGAACTTTG
rJMFF043M11+ GCTGATTGGGCAATTTGCCAAAGGAAATTAAAACACCTTTAGATCTGATACAGAACTTTG
                      ____________________________________________________________
consensus GCTGATTGGGCAATTTGCCAAAGGAAATTAAAACACCTTTAGATCTGATACAGAACTTTG
 
. : . : . : . : . : . :
rJMFF019D03+ TTGCATCCTGTGTGATGCCTGCCTGTGTGACAATGTTCAACAAAA
JMFN038M20- TTGCATCCTGTGTGATGCCTGCCTGTGTGACAATGTTCAACAAAAAGCGGCTTTTCGCCT
rJMFF043M11+ TTGCATCCTGTGTGATGCCTGCCTGTGTGACAATGTTCAACAAAAAGCGGCTTTTCGCCT
                      ____________________________________________________________
consensus TTGCATCCTGTGTGATGCCTGCCTGTGTGACAATGTTCAACAAAAAGCGGCTTTTCGCCT
 
. : . : . : . : . : . :
JMFN038M20- TGTAGT
rJMFF043M11+ TGTAGTATAATTGTTCXXXXXXXXXXXXXXXXXXXCTCTCCAGGGTGATCCGCCATAAGG
                      ____________________________________________________________
consensus TGTAGTATAATTGTTCNNNNNNNNNNNNNNNNNNNCTCTCCAGGGTGATCCGCCATAAGG