Contig 001182:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008O11Sequence549003088 (8)emb|CDP03931.1|5e-53unnamed protein product [Coffea canephora]765001182 (8)ref|XP_009777271.1|3e-108PREDICTED: probable glucan endo-1,3-beta-glucosidase A6 [Nicotiana sylvestris]
JMFF017F16Sequence576003088 (8)ref|XP_009777271.1|1e-61PREDICTED: probable glucan endo-1,3-beta-glucosidase A6 [Nicotiana sylvestris]765001182 (8)ref|XP_009777271.1|3e-108PREDICTED: probable glucan endo-1,3-beta-glucosidase A6 [Nicotiana sylvestris]
JMFF023A11Sequence499003088 (8)emb|CDP03931.1|2e-45unnamed protein product [Coffea canephora]683001182 (8)emb|CDP03931.1|4e-91unnamed protein product [Coffea canephora]
JMFF028O12Sequence468003088 (8)ref|XP_009777271.1|7e-41PREDICTED: probable glucan endo-1,3-beta-glucosidase A6 [Nicotiana sylvestris]622001182 (8)emb|CDP03931.1|1e-80unnamed protein product [Coffea canephora]
JMFF029C01Sequence455003088 (8)emb|CDP03931.1|4e-44unnamed protein product [Coffea canephora]767001182 (8)emb|CDP03931.1|3e-89unnamed protein product [Coffea canephora]
JMFF040K21Sequence498003088 (8)ref|XP_009777271.1|4e-45PREDICTED: probable glucan endo-1,3-beta-glucosidase A6 [Nicotiana sylvestris]661001182 (8)emb|CDP03931.1|3e-91unnamed protein product [Coffea canephora]
JMFF041L16Sequence639003088 (8)ref|XP_009777271.1|1e-72PREDICTED: probable glucan endo-1,3-beta-glucosidase A6 [Nicotiana sylvestris]592001182 (8)emb|CDP03931.1|6e-70unnamed protein product [Coffea canephora]
JMSF033L13Sequence662003088 (8)ref|XP_009610543.1|9e-92PREDICTED: probable glucan endo-1,3-beta-glucosidase A6 [Nicotiana tomentosifor713001182 (8)ref|XP_009777271.1|2e-102PREDICTED: probable glucan endo-1,3-beta-glucosidase A6 [Nicotiana sylvestris]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF029C01+                                                                  CGGA
rJMFF017F16+                                                                   GGA
rJMFF008O11+                                                                   GGA
                      ____________________________________________________________
consensus                                                                     CGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF029C01+          AACGGGTTGGCCCAACGGCGGCGACGTCGATCAAATCGGCGCGAGTATTTATAATTCCGC
rJMFF017F16+          AACGGGTTGGCCCAACGGCGGCGACGTCGATCAAATCGGCGCGAGTATTTATAATTCCGC
rJMSF033L13+                                GACGTCGATCAAATCGGCGCGAGTATTTATAATTCCGC
rJMFF008O11+          AACGGGTTGGCCCAACGGCGGNGACGTCGATCAAATCGGCGCGAGTATTTATAATTCCGC
                      ____________________________________________________________
consensus             AACGGGTTGGCCCAACGGCGGCGACGTCGATCAAATCGGCGCGAGTATTTATAATTCCGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF029C01+          CACGTATAACCGGAACGTGGTGAAGAAGTTTACCTCGAAGGTGGGGGACGCCGGCGAGGC
rJMFF017F16+          CACGTATAACCGGAACGTGGTGAAGAAGTTTACCTCGAAGGT-GGGGACGCCGGCGAGGC
rJMSF033L13+          CACGTATAACCGGAACGTGGTGAAGAAGTTTACCTCGAAGGT-GGGGACGCCGGCGAGGC
rJMFF023A11+                             GTGAAGAAGTTTACCTCGAAGGT-GGGGACGCCGGCGAGGC
rJMFF040K21+                       AACGTGGTGAAGAAGTTTACCTCGAAGGT-GGGGACGCCGGCGAGGC
rJMFF008O11+          CACGTATAACCGGAACGTGGTGAAGAAGTTTACCTCGAAGGT-GGGGACGCCGGCGAGGC
                      ____________________________________________________________
consensus             CACGTATAACCGGAACGTGGTGAAGAAGTTTACCTCGAAGGT-GGGGACGCCGGCGAGGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF029C01+          CGGGCGTGGTAATTCCGACGCTTATTTTCGCTCTGTATAACGAGAACCAGAAACCGGGTC
rJMFF017F16+          CGGGCGTGGTAATTCCGACGCTTATTTTCGCTCTGTATAACGAGAACCAGAAACCGGGTC
rJMSF033L13+          CGGGCGTGGTAATTCCGACGCTTATTTTCGCTCTGTATAACGAGAACCAGAAACCGGGTC
rJMFF023A11+          CGGGCGTGGTAATTCCGACGCTTATTTTCGCTCTGTATAACGAGAACCAGAAACCGGGTC
rJMFF040K21+          CGGGCGTGGTAATTCCGACGCTTATTTTCGCTCTGTATAACGAGAACCAGAAACCGGGTC
rJMFF028O12+                               TTATTTTCGCTCTGTATAACGAGANCCAGAAACCGGGTC
rJMFF008O11+          CGGGCGTGGTAATTCCGACGCTTATTTTCGCTCTGTATAACGAGAACCAGAAACCGGGTC
                      ____________________________________________________________
consensus             CGGGCGTGGTAATTCCGACGCTTATTTTCGCTCTGTATAACGAGAACCAGAAACCGGGTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF029C01+          CGGGTACGGAGCGGCATTTCGGGGTGTTGTACCCGAACGGGACCAACATTTACCCGATTG
rJMFF017F16+          CGGGTACGGAGCGGCATTTCGGGGTGTTGTACCCGAACGGGACCAACATTTACCCGATTG
rJMSF033L13+          CGGGTACGGAGCGGCATTTCGGGGTGTTGTACCCGAACGGGACCAACATTTACCCGATTG
rJMFF023A11+          CGGGTACGGAGCGGCATTTCGGGGTGTTGTACCCGAACGGGACCAACATTTACCCGATTG
rJMFF040K21+          CGGGTACGGAGCGGCATTTCGGGGTGTTGTACCCGAACGGGACCAACATTTACCCGATTG
rJMFF028O12+          CGGGTACGGAGCGGCATTTCGGGGTGTTGTACCCGAACGGGACCAACATTTACCCGATTG
rJMFF008O11+          CGGGTACGGAGCGGCATTTCGGGGTGTTGTACCCGAACGGGACCAACATTTACCCGATTG
rJMFF041L16+                  GAGCGGCATTTCGGGGTGTTGTACCCGAACGGGACCAACATTTACCCGATTG
                      ____________________________________________________________
consensus             CGGGTACGGAGCGGCATTTCGGGGTGTTGTACCCGAACGGGACCAACATTTACCCGATTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF029C01+          ACCTGTCGGGGAAGACGCCGGAATCCGAATTCCCGCCGCTGCCGAAGCCGACGACCAACC
rJMFF017F16+          ACCTGTCGGGGAAGACGCCGGAATCCGAATTCCCGCCGCTGCCGAAGCCGACGACCAACC
rJMSF033L13+          ACCTGTCGGGGAAGACGCCGGAATCCGAATTCCCGCCGCTGCCGAAGCCGACGACCAACC
rJMFF023A11+          ACCTGTCGGGGAAGACGCCGGAATCCGAATTCCCGCCGCTGCCGAAGCCGACGACCAACC
rJMFF040K21+          ACCTGTCGGGGAAGACGCCGGAATCCGAATTCCCGCCGCTGCCGAAGCCGACGACCAACC
rJMFF028O12+          ACCTGTCGGGGAAGACGCCGGAATCCGAATTCCCGCCGCTGCCGAAGCCGACGACCAACC
rJMFF008O11+          ACCTGTCGGGGAAGACGCCGGAATCCGAATTCCCGCCGCTGCCGAAGCCGACGACCAACC
rJMFF041L16+          ACCTGTCGGGGAAGACGCCGGAATCCGAATTCCCGCCGCTGCCGAAGCCGACGACCAACC
                      ____________________________________________________________
consensus             ACCTGTCGGGGAAGACGCCGGAATCCGAATTCCCGCCGCTGCCGAAGCCGACGACCAACC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF029C01+          AACCGTACAAAGGAAAAGTTTGGTGCGTGGTGGCTCCGGCGGCGAATCTAACCGCGGTGG
rJMFF017F16+          AACCGTACAAAGGAAAAGTTTGGTGCGTGGTGGCTCCGGCGGCGAATCTAACCGCGGTGG
rJMSF033L13+          AACCGTACAAAGGAAAAGTTTGGTGCGTGGTGGCTCCGGCGGCGAATCTAACCGCGGTGG
rJMFF023A11+          AACCGTACAAAGGAAAAGTTTGGTGCGTGGTGGCTCCGGCGGCGAATCTAACCGCGGTGG
rJMFF040K21+          AACCGTACAAAGGAAAAGTTTGGTGCGTGGTGGCTCCGGCGGCGAATCTAACCGCGGTGG
rJMFF028O12+          AACCGTACAAAGGAAAAGTTTGGTGCGTGGTGGCTCCGGCGGCGAATCTAACCGCGGTGG
rJMFF008O11+          AACCGTACAAAGGAAAAGTTTGGTGCGTGGTGGCTCCGGCGGCGAATCTAACCGCGGTGG
rJMFF041L16+          AACCGTACAAAGGAAAAGTTTGGTGCGTGGTGGCTCCGGCGGCGAATCTAACCGCGGTGG
                      ____________________________________________________________
consensus             AACCGTACAAAGGAAAAGTTTGGTGCGTGGTGGCTCCGGCGGCGAATCTAACCGCGGTGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF029C01+          CCGACGCTTTATCGTACGCTTGCGGGCAGGGTAATCGGACCTGCAACCCGATCCAACCGG
rJMFF017F16+          CCGACGCTTTATCGTACGCTTGCGGGCAGGGTAATCGGACCTGCAACCCGATCCAACCGG
rJMSF033L13+          CCGACGCTTTATCGTACGCTTGCGGGCAGGGTAATCGGACCTGCAACCCGATCCAACCGG
rJMFF023A11+          CCGACGCTTTATCGTACGCTTGCGGGCAGGGTAATCGGACCTGCAACCCGATCCAACCGG
rJMFF040K21+          CCGACGCTTTATCGTACGCTTGCGGGCAGGGTAATCGGACCTGCAACCCGATCCAACCGG
rJMFF028O12+          CCGACGCTTTATCGTACGCTTGCGGGCAGGGTAATCGGACCTGCAACCCGATCCAACCGG
rJMFF008O11+          CCGACGCTTTATCGTACGCTTGCGGGCAGGGTAATCGGACCTGCAACCCGATCCAACCGG
rJMFF041L16+          CCGACGCTTTATCGTACGCTTGCGGGCAGGGTAATCGGACCTGCAACCCGATCCAACCGG
                      ____________________________________________________________
consensus             CCGACGCTTTATCGTACGCTTGCGGGCAGGGTAATCGGACCTGCAACCCGATCCAACCGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF029C01+          GCGGCGCGTGTTACAACCCGAACTCATTGATCCGCCATGCGAGCTATGCTTTCAGTTCGT
rJMFF017F16+          GCGGCGCGTGTTACAACCCGAACTCATTGATCCGCCATGCGAGCTATGCTTTCAGTTCGT
rJMSF033L13+          GCGGCGCGTGTTACAACCCGAACTCATTGATCCGCCATGCGAGCTATGCTTTCAGTTCGT
rJMFF023A11+          GCGGCGCGTGTTACAACCCGAACTCATTGATCCGCCATGCGAGCTATGCTTTCAGTTCGT
rJMFF040K21+          GCGGCGCGTGTTACAACCCGAACTCATTGATCCGCCATGCGAGCTATGCTTTCAGTTCGT
rJMFF028O12+          GCGGCGCGTGTTACAACCCGAACTCATTGATCCGCCATGCGAGCTATGCTTTCAGTTCGT
rJMFF008O11+          GCGGCGCGTGTTACAACCCGAACTCATTGATCCGCCATGCGAGCTATGCTTTCAGTTCGT
rJMFF041L16+          GCGGCGCGTGTTACAACCCGAACTCATTGATCCGCCATGCGAGCTATGCTTTCAGTTCGT
                      ____________________________________________________________
consensus             GCGGCGCGTGTTACAACCCGAACTCATTGATCCGCCATGCGAGCTATGCTTTCAGTTCGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF029C01+          ACTGGGCACAGTTTCGCAGTCTCGGCGGGACATGTTACTTCAACGGACTCGCCGTTAAGA
rJMFF017F16+          ACTGGGCACAGTTTCGCAGTCTCGGCGGGACATGTTACTTCAACGGACTCGCCGTTAAGA
rJMSF033L13+          ACTGGGCACAGTTTCGCAGTCTCGGCGGGACATGTTACTTCAACGGACTCGCCGTTAAGA
rJMFF023A11+          ACTGGGCACAGTTTCGCAGTCTCGGCGGGACATGTTACTTCAACGGACTCGCCGTTAAGA
rJMFF040K21+          ACTGGGCACAGTTTCGCAGTCTCGGCGGGACATGTTACTTCAACGGACTCGCCGTTAAGA
rJMFF028O12+          ACTGGGCACAGTTTCGCAGTCTCGGCGGGACATGTTACTTCAACGGACTCGCCGTTAAGA
rJMFF008O11+          ACTGGGCACAGTTTCGCAGTCTCGGCGGGACATGTTACTTCAACGGACTCGCCGTTAAGA
rJMFF041L16+          ACTGGGCACAGTTTCGCAGTCTCGGCGGGACATGTTACTTCAACGGACTCGCCGTTAAGA
                      ____________________________________________________________
consensus             ACTGGGCACAGTTTCGCAGTCTCGGCGGGACATGTTACTTCAACGGACTCGCCGTTAAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF029C01+          CAATCAATGATCCCAGTTATGGAGCATGCAAGTACCCCAGTATTACACTTTGATGGCGAA
rJMFF017F16+          CAATCAATGATCCCAGTTATGGAGCATGCAAGTACCCCAGTATTACACTTTGATGGCGAA
rJMSF033L13+          CAATCAATGATCCCAGTTATGGAGCATGCAAGTACCCCAGTATTACACTTTGATGGCGAA
rJMFF023A11+          CAATCAATGATCCCAGTTATGGAGCATGCAAGTACCCCAGTATTACACTTTGATGGCGAA
rJMFF040K21+          CAATCAATGATCCCAGTTATGGAGCATGCAAGTACCCCAGTATTACACTTTGATGGCGAA
rJMFF028O12+          CAATCAATGATCCCAGTTATGGAGCATGCAAGTACCCCAGTATTACACTTTGATGGCGAA
rJMFF008O11+          CAATCAATGATCCCAGTTATGGAGCATGCAAGTACCCCAGTATTACACTTTGATGGCGAA
rJMFF041L16+          CAATCAATGATCCCAGTTATGGAGCATGCAAGTACCCCAGTATTACACTTTGATGGCGAA
                      ____________________________________________________________
consensus             CAATCAATGATCCCAGTTATGGAGCATGCAAGTACCCCAGTATTACACTTTGATGGCGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF029C01+          GAAGTAGTCGCCGCCGGCGAGACCAGAAGACACCGGAAAACTGATAGAAAAGCAACAAAT
rJMFF017F16+          GAAGTAGTCGCCGCCGGCGAGACCAGAAGACACCGGAAAACTGATAGAAAAGCAACAAAT
rJMSF033L13+          GAAGTAGTCGCCGCCGGCGAGACCAGAAGACACCGGAAAACTGATAGAAAAGCAACAAAT
rJMFF023A11+          GAAGTAGTCGCCGCCGGCGAGACCAGAAGACACCGGAAAACTGATAGAAAAGCAACAAAT
rJMFF040K21+          GAAGTAGTCGCCGCCGGCGAGACCAGAAGACACCGGAAAACTGATAGAAAAGCAACAAAT
rJMFF028O12+          GAAGTAGTCGCCGCCGGCGAGACCAGAAGACACCGGAAAACTGATAGAAAAGCAACAAAT
rJMFF008O11+          GAAGTAGTCGCCGCCGGCGAGACCAGAAGACACCGGAAAACTGATAGAAAAGCAACAAAT
rJMFF041L16+          GAAGTAGTCGCCGCCGGCGAGACCAGAAGACACCGGAAAACTGATAGAAAAGCAACAAAT
                      ____________________________________________________________
consensus             GAAGTAGTCGCCGCCGGCGAGACCAGAAGACACCGGAAAACTGATAGAAAAGCAACAAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF029C01+          GTTTTCCTTAACACCATTTATCCTTAAACCATCATAATCCTGTTCTTGAAGTTATACGTT
rJMFF017F16+          GTTTTCCTTAACACCATTTATCCTTAAACCATCATAATCCTGTTCTTGAAGTTATACGTT
rJMSF033L13+          GTTTTCCTTAACACCATTTATCCTTAAACCATCATAATCCTGTTCTTGAAGTTATACGTT
rJMFF023A11+          GTTTTCCTTAACACCATTTATCCTTAAACCATCATAATCCTGTTCTTGAAGTTATACGTT
rJMFF040K21+          GTTTTCCTTAACACCATTTATCCTTAAACCATCATAATCCTGTTCTTGAAGTTATACGTT
rJMFF028O12+          GTTTTCCTTAACACCATTTATCCTTAAACCATCATAATCCTGTTCTTGAAGTTATACGTT
rJMFF008O11+          GTTTTCCTTAACACCATTTATCCTTAAACCATCATAATCCTGTTCTTGAAGTTATACGTT
rJMFF041L16+          GTTTTCCTTAACACCATTTATCCTTAAACCATCATAATCCTGTTCTTGAAGTTATACGTT
                      ____________________________________________________________
consensus             GTTTTCCTTAACACCATTTATCCTTAAACCATCATAATCCTGTTCTTGAAGTTATACGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF029C01+          GTAATGATTAGTTTTGCATAATTCTTTGGATTAA                          
rJMFF017F16+          GTAATGATTAGTTTTGCATAATTCTTTGGATTAATGAATCATT                 
rJMSF033L13+          GTAATGATTAGTTT                                              
rJMFF023A11+          GTAATGATTAGTTTTGCATAATTCTTTGGATTAATGAATCATT                 
rJMFF040K21+          GTAATGATTAGTTTT                                             
rJMFF028O12+          GTAATGATTAGTTTTGC                                           
rJMFF008O11+          GTAATGATTAGTTTTGCATAATTCTTTGGATTAATGAATCATT                 
rJMFF041L16+          GTAATGATTAGTTTTGCATAATTCTTTGGATTAATGAATCATTCTGAGTTTTTCGTGACT
                      ____________________________________________________________
consensus             GTAATGATTAGTTTTGCATAATTCTTTGGATTAATGAATCATTCTGAGTTTTTCGTGACT